Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is 21674014

Identifier: 21674014

GI number: 21674014

Start: 1117761

End: 1118297

Strand: Direct

Name: 21674014

Synonym: CT1188

Alternate gene names: NA

Gene position: 1117761-1118297 (Clockwise)

Preceding gene: 21674013

Following gene: 21674015

Centisome position: 51.87

GC content: 57.73

Gene sequence:

>537_bases
ATGACCGATTTCGAGTGGAAAAGCAACTATCTGAAATCACACAAGCTCAAGACACTTGGCGTCATAATCGTGCTGGTGCT
CAGGTACCTTTACACCTCGCTCTTCATCTACGGCTTCGTCCACAAAATCATCCACGGCTGGATGTGGAGCGACATTCTCG
CCCATCACTTCACGAAACGGCTGCACGAACTGCTTGCCACGGCCTCGACGTCCAGCTCCTTTGAAGCGACCGTCGCCGTG
TGGCAGGCCTCATATCTGGAGCACTTCGCCCTGCCGCTGGTGATGCCCATCGCCTGGATTGTCACCATCGGCGAGCTCGC
CATCGGCATCGCGCTGCTCTTCGGCGTCACGACCCGCATCAACGCAGCCTTTGGCCTCTTCATGCTGCTCAACTTCGCGG
CTGGCGGCTACTACAACCTGACCATCCCGCCGCTGGTCGCCATTTCGATACTGCTCATCGTGCTGCCGACAGGCCACTGG
CTCGGCCTCGACCGCAGCCTTAACAGGAAATATCCGGAGTCACCATGGTTCAGATAG

Upstream 100 bases:

>100_bases
GTAATGCGCTTTTTTCGTAAGTTTGCGATACATTCAAATTATAGCGCAAGACGAACAATGCCCCACGGAAAAGCAACCTT
GAACCCTTGTTCAGCAAGTC

Downstream 100 bases:

>100_bases
CAGGCACACCGGTTCCATTATCGGCAAAAAGCCGCGGACCAAACGCTTTGAGTTCGCTTCTGGCGGCGCTGTTTCTCCTG
CTGTCGCAACCGGCCAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MTDFEWKSNYLKSHKLKTLGVIIVLVLRYLYTSLFIYGFVHKIIHGWMWSDILAHHFTKRLHELLATASTSSSFEATVAV
WQASYLEHFALPLVMPIAWIVTIGELAIGIALLFGVTTRINAAFGLFMLLNFAAGGYYNLTIPPLVAISILLIVLPTGHW
LGLDRSLNRKYPESPWFR

Sequences:

>Translated_178_residues
MTDFEWKSNYLKSHKLKTLGVIIVLVLRYLYTSLFIYGFVHKIIHGWMWSDILAHHFTKRLHELLATASTSSSFEATVAV
WQASYLEHFALPLVMPIAWIVTIGELAIGIALLFGVTTRINAAFGLFMLLNFAAGGYYNLTIPPLVAISILLIVLPTGHW
LGLDRSLNRKYPESPWFR
>Mature_177_residues
TDFEWKSNYLKSHKLKTLGVIIVLVLRYLYTSLFIYGFVHKIIHGWMWSDILAHHFTKRLHELLATASTSSSFEATVAVW
QASYLEHFALPLVMPIAWIVTIGELAIGIALLFGVTTRINAAFGLFMLLNFAAGGYYNLTIPPLVAISILLIVLPTGHWL
GLDRSLNRKYPESPWFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20222; Mature: 20091

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDFEWKSNYLKSHKLKTLGVIIVLVLRYLYTSLFIYGFVHKIIHGWMWSDILAHHFTKR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHELLATASTSSSFEATVAVWQASYLEHFALPLVMPIAWIVTIGELAIGIALLFGVTTRI
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAAFGLFMLLNFAAGGYYNLTIPPLVAISILLIVLPTGHWLGLDRSLNRKYPESPWFR
HHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCC
>Mature Secondary Structure 
TDFEWKSNYLKSHKLKTLGVIIVLVLRYLYTSLFIYGFVHKIIHGWMWSDILAHHFTKR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHELLATASTSSSFEATVAVWQASYLEHFALPLVMPIAWIVTIGELAIGIALLFGVTTRI
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAAFGLFMLLNFAAGGYYNLTIPPLVAISILLIVLPTGHWLGLDRSLNRKYPESPWFR
HHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA