| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673972
Identifier: 21673972
GI number: 21673972
Start: 1072417
End: 1073007
Strand: Direct
Name: 21673972
Synonym: CT1146
Alternate gene names: NA
Gene position: 1072417-1073007 (Clockwise)
Preceding gene: 21673971
Following gene: 21673982
Centisome position: 49.77
GC content: 50.42
Gene sequence:
>591_bases ATGAAAATATTTCTGAAAATCTCTCTGCTTTTCTTTCTGATTTCCAGCGCGCTGTGCGCCTCGCTGTATCTTGGCCTCGG GTTTCTCGTGTCGATGCACTCAACAAAGCCTGAAAAGGCTGACATAATCGTGATTCTTGGGGGCGACGACGGACTGCGGG TCAGCAAAGGAGGCGATCTTTACAAGGCAGGCTATGCAAAACATGTTCTGCTGACCGGCATTGACAGCCGCTATTACCGC CCGAATCATCCCAACTGGCGTGAACGCAAGCTCATGGCACGTGGCGTACCGAGAAAACACATCATCGTCGATACCTGGTC GGAAACAAGCTGGGAGGAGGCTGAAAACACCTCTGATCTGATGGATAAAAACGGGTGGAAAAGTGCGCTCGTGGTCAGCG ATCCACCGCATATGCTTCGCCTCAACAAAACATGGAAAAAGGCGTTTGCAGGCACAAACAAGCGTTTCAGACTGGTAGCC ACTGAACCCTCGTGGTGGAATCCTCTCCTCTGGTGGCGCAACCCCATCAGTTATCGCTTCGTCATAAACGAGCTCAAAAA GAACATCTATTATCTGGTGACCTATTACTGA
Upstream 100 bases:
>100_bases GACTCCCCACTCATTGTAACAACCTGGCACTGTTAAGGCCTCAAGTTTATTCTCTGATAATCGATAACGGCATGAACCCC GAATTCCGCCAGCCTGTGCC
Downstream 100 bases:
>100_bases GACCATTACCGGGCTCACCTGGGGCCGCTGACACCGGGTCCTTCGATAGCGCTCCGGCCTCCGGTGAGCGGCGTGACTTT GATGTGCGTGGCGATGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MKIFLKISLLFFLISSALCASLYLGLGFLVSMHSTKPEKADIIVILGGDDGLRVSKGGDLYKAGYAKHVLLTGIDSRYYR PNHPNWRERKLMARGVPRKHIIVDTWSETSWEEAENTSDLMDKNGWKSALVVSDPPHMLRLNKTWKKAFAGTNKRFRLVA TEPSWWNPLLWWRNPISYRFVINELKKNIYYLVTYY
Sequences:
>Translated_196_residues MKIFLKISLLFFLISSALCASLYLGLGFLVSMHSTKPEKADIIVILGGDDGLRVSKGGDLYKAGYAKHVLLTGIDSRYYR PNHPNWRERKLMARGVPRKHIIVDTWSETSWEEAENTSDLMDKNGWKSALVVSDPPHMLRLNKTWKKAFAGTNKRFRLVA TEPSWWNPLLWWRNPISYRFVINELKKNIYYLVTYY >Mature_196_residues MKIFLKISLLFFLISSALCASLYLGLGFLVSMHSTKPEKADIIVILGGDDGLRVSKGGDLYKAGYAKHVLLTGIDSRYYR PNHPNWRERKLMARGVPRKHIIVDTWSETSWEEAENTSDLMDKNGWKSALVVSDPPHMLRLNKTWKKAFAGTNKRFRLVA TEPSWWNPLLWWRNPISYRFVINELKKNIYYLVTYY
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22785; Mature: 22785
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFLKISLLFFLISSALCASLYLGLGFLVSMHSTKPEKADIIVILGGDDGLRVSKGGDL CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEECCCCCE YKAGYAKHVLLTGIDSRYYRPNHPNWRERKLMARGVPRKHIIVDTWSETSWEEAENTSDL EECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCHHH MDKNGWKSALVVSDPPHMLRLNKTWKKAFAGTNKRFRLVATEPSWWNPLLWWRNPISYRF HCCCCCCEEEEEECCCCEEEECHHHHHHHCCCCCEEEEEEECCCCCCCEEEECCCCCHHH VINELKKNIYYLVTYY HHHHHCCCEEEEEEEC >Mature Secondary Structure MKIFLKISLLFFLISSALCASLYLGLGFLVSMHSTKPEKADIIVILGGDDGLRVSKGGDL CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEECCCCCE YKAGYAKHVLLTGIDSRYYRPNHPNWRERKLMARGVPRKHIIVDTWSETSWEEAENTSDL EECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCHHH MDKNGWKSALVVSDPPHMLRLNKTWKKAFAGTNKRFRLVATEPSWWNPLLWWRNPISYRF HCCCCCCEEEEEECCCCEEEECHHHHHHHCCCCCEEEEEEECCCCCCCEEEECCCCCHHH VINELKKNIYYLVTYY HHHHHCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA