Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21673972

Identifier: 21673972

GI number: 21673972

Start: 1072417

End: 1073007

Strand: Direct

Name: 21673972

Synonym: CT1146

Alternate gene names: NA

Gene position: 1072417-1073007 (Clockwise)

Preceding gene: 21673971

Following gene: 21673982

Centisome position: 49.77

GC content: 50.42

Gene sequence:

>591_bases
ATGAAAATATTTCTGAAAATCTCTCTGCTTTTCTTTCTGATTTCCAGCGCGCTGTGCGCCTCGCTGTATCTTGGCCTCGG
GTTTCTCGTGTCGATGCACTCAACAAAGCCTGAAAAGGCTGACATAATCGTGATTCTTGGGGGCGACGACGGACTGCGGG
TCAGCAAAGGAGGCGATCTTTACAAGGCAGGCTATGCAAAACATGTTCTGCTGACCGGCATTGACAGCCGCTATTACCGC
CCGAATCATCCCAACTGGCGTGAACGCAAGCTCATGGCACGTGGCGTACCGAGAAAACACATCATCGTCGATACCTGGTC
GGAAACAAGCTGGGAGGAGGCTGAAAACACCTCTGATCTGATGGATAAAAACGGGTGGAAAAGTGCGCTCGTGGTCAGCG
ATCCACCGCATATGCTTCGCCTCAACAAAACATGGAAAAAGGCGTTTGCAGGCACAAACAAGCGTTTCAGACTGGTAGCC
ACTGAACCCTCGTGGTGGAATCCTCTCCTCTGGTGGCGCAACCCCATCAGTTATCGCTTCGTCATAAACGAGCTCAAAAA
GAACATCTATTATCTGGTGACCTATTACTGA

Upstream 100 bases:

>100_bases
GACTCCCCACTCATTGTAACAACCTGGCACTGTTAAGGCCTCAAGTTTATTCTCTGATAATCGATAACGGCATGAACCCC
GAATTCCGCCAGCCTGTGCC

Downstream 100 bases:

>100_bases
GACCATTACCGGGCTCACCTGGGGCCGCTGACACCGGGTCCTTCGATAGCGCTCCGGCCTCCGGTGAGCGGCGTGACTTT
GATGTGCGTGGCGATGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MKIFLKISLLFFLISSALCASLYLGLGFLVSMHSTKPEKADIIVILGGDDGLRVSKGGDLYKAGYAKHVLLTGIDSRYYR
PNHPNWRERKLMARGVPRKHIIVDTWSETSWEEAENTSDLMDKNGWKSALVVSDPPHMLRLNKTWKKAFAGTNKRFRLVA
TEPSWWNPLLWWRNPISYRFVINELKKNIYYLVTYY

Sequences:

>Translated_196_residues
MKIFLKISLLFFLISSALCASLYLGLGFLVSMHSTKPEKADIIVILGGDDGLRVSKGGDLYKAGYAKHVLLTGIDSRYYR
PNHPNWRERKLMARGVPRKHIIVDTWSETSWEEAENTSDLMDKNGWKSALVVSDPPHMLRLNKTWKKAFAGTNKRFRLVA
TEPSWWNPLLWWRNPISYRFVINELKKNIYYLVTYY
>Mature_196_residues
MKIFLKISLLFFLISSALCASLYLGLGFLVSMHSTKPEKADIIVILGGDDGLRVSKGGDLYKAGYAKHVLLTGIDSRYYR
PNHPNWRERKLMARGVPRKHIIVDTWSETSWEEAENTSDLMDKNGWKSALVVSDPPHMLRLNKTWKKAFAGTNKRFRLVA
TEPSWWNPLLWWRNPISYRFVINELKKNIYYLVTYY

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22785; Mature: 22785

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFLKISLLFFLISSALCASLYLGLGFLVSMHSTKPEKADIIVILGGDDGLRVSKGGDL
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEECCCCCE
YKAGYAKHVLLTGIDSRYYRPNHPNWRERKLMARGVPRKHIIVDTWSETSWEEAENTSDL
EECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCHHH
MDKNGWKSALVVSDPPHMLRLNKTWKKAFAGTNKRFRLVATEPSWWNPLLWWRNPISYRF
HCCCCCCEEEEEECCCCEEEECHHHHHHHCCCCCEEEEEEECCCCCCCEEEECCCCCHHH
VINELKKNIYYLVTYY
HHHHHCCCEEEEEEEC
>Mature Secondary Structure
MKIFLKISLLFFLISSALCASLYLGLGFLVSMHSTKPEKADIIVILGGDDGLRVSKGGDL
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEECCCCCE
YKAGYAKHVLLTGIDSRYYRPNHPNWRERKLMARGVPRKHIIVDTWSETSWEEAENTSDL
EECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCHHH
MDKNGWKSALVVSDPPHMLRLNKTWKKAFAGTNKRFRLVATEPSWWNPLLWWRNPISYRF
HCCCCCCEEEEEECCCCEEEECHHHHHHHCCCCCEEEEEEECCCCCCCEEEECCCCCHHH
VINELKKNIYYLVTYY
HHHHHCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA