| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673941
Identifier: 21673941
GI number: 21673941
Start: 1048420
End: 1049937
Strand: Reverse
Name: 21673941
Synonym: CT1115
Alternate gene names: NA
Gene position: 1049937-1048420 (Counterclockwise)
Preceding gene: 21673942
Following gene: 21673933
Centisome position: 48.72
GC content: 37.02
Gene sequence:
>1518_bases TTGAAAAAGGGGGTTGATATGAGATATTTTTATGATTCACATTGCCATATGATGAATCTGAGCCATCCCAATCTCAGCGC GATTATCAAAAGGATTTATAATGACAGCATAAAACCTCTGTTGTTGAAGTACTCTGTGTATCTGAAAGCAGCTTTGCTCT TGCTTCTTTTTGTTATTCCGGTTGTTGTTATAACACTCTTGCTGACCGGTCATTTTGTGGTTATCAAGTGGATACTTTAT GCTGTTTCCCTGATCGCCGTGATCTTGTTTGTATTTGTCGTGGTTAAATTTGGAGATAAAAAGAAAAGGGAAATAGAAAT TTCCAAGATAAAGTCAAACTTGCTCGATAAGGTAAAGGAGAAGCTTGCCAATGTTATGAATTTGCTGGCAGCAATGGAAA CGGATATAGGGGATTGTCTTATCCAGATGGAAGAGGAGTTAAGAAAAAAAATACCATTGAATAATGTTCTTGTTATTTCT GGAAATGGTGAAAAAAAAGAGTATGATAAAATAGTATTGACCCCTCTCATTATGGATTTTGGATTAAAGGATTCCGGAAA AACGAATCTTATATACAAGGTCAGATGGAAGCCGATTGTTGCGCAGGTGGAGGATTTATGTATAGGAATAAGAGATTATT ACCTTTATCGTGATAAATATATCACCGGGCACGCAGAACCGCTTTTTCAGATCATTCCATTCATGGGGATCAACACGCAG AATTATTATTCTGAAAAAGACAATACAACAGGTAAAAGTATTTCAGTCAGCCTTGTACAGCTTTTGGATAAAAACTTTAG TGAATTTAAATATGACACATCACCTCAGATGAGGCGTAAAAAAATAGATGCTGTCAATTGGCGTCAATTCAATGGTGACA TTGAGTCAATTGGTTCTTACTATTTTTTAGGTATCAAAGTCTATCCTCCTCTTGGTTTCGATCCCTGGCCTGAAGATGAT ATTGAGCGTGCGAAAGTCTGTTACCTGTATCAATATTGTATAGATCACAATATTCCGATAACCGCGCATTGTAGTCCGGG CGGATTTCTTGTGGATGATGATTTTAAAAATTTCTCTAGTCCATATAAGTGGGAGCAGGTACTTGATTATACTGACGAAA AAAATAACAAGCCATTTGAAAGATTGAGACTCAATTTGGCTCATTTTGGCGGTGCGGATAGCAAGGTGTGGCGCAAGAAA ATTGCTGATATGATTCTCAAAAAGGATACTGTTTCAAGCAAGTACAAGTATGAAAATCTTTATACCGATATTTCATATCA GGGAGTTGATAAAAAATCTTATGATGCACTAAAAGACTTGTTGGATCGGTATGATTCAGCAGAAAGAGCGCGACTGATTG AGCGTCTGATCTTCGGATCAGACTTTATGATTAACTTGCAGGATATAAACTCGTATAGTCAATATCTCGACTTTTTCTTC AAAACCAATGCGCTGACGCTGGAAGAGAAAGATATGCTGTGTAACAAGAATGCCGAGAGATTTTTGTTTGTCGGGTAA
Upstream 100 bases:
>100_bases AATTTTCTTGCCCACTTTGATCGCTGTTCTCGGGAGTACTTTGGTCTGGTTCAGCGGTGCAAAAGATGACTTTGTACCTC TGTTTCTCTAATGTCAATAT
Downstream 100 bases:
>100_bases GTAATCGATGTTATAAAAAAAGCAGGCTACGAAAATCTGTGCCTGCTTTTTTGTTTTTAACTGCGATAATTTTGAATTAT CACTCGCTCTTGTTTACCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MKKGVDMRYFYDSHCHMMNLSHPNLSAIIKRIYNDSIKPLLLKYSVYLKAALLLLLFVIPVVVITLLLTGHFVVIKWILY AVSLIAVILFVFVVVKFGDKKKREIEISKIKSNLLDKVKEKLANVMNLLAAMETDIGDCLIQMEEELRKKIPLNNVLVIS GNGEKKEYDKIVLTPLIMDFGLKDSGKTNLIYKVRWKPIVAQVEDLCIGIRDYYLYRDKYITGHAEPLFQIIPFMGINTQ NYYSEKDNTTGKSISVSLVQLLDKNFSEFKYDTSPQMRRKKIDAVNWRQFNGDIESIGSYYFLGIKVYPPLGFDPWPEDD IERAKVCYLYQYCIDHNIPITAHCSPGGFLVDDDFKNFSSPYKWEQVLDYTDEKNNKPFERLRLNLAHFGGADSKVWRKK IADMILKKDTVSSKYKYENLYTDISYQGVDKKSYDALKDLLDRYDSAERARLIERLIFGSDFMINLQDINSYSQYLDFFF KTNALTLEEKDMLCNKNAERFLFVG
Sequences:
>Translated_505_residues MKKGVDMRYFYDSHCHMMNLSHPNLSAIIKRIYNDSIKPLLLKYSVYLKAALLLLLFVIPVVVITLLLTGHFVVIKWILY AVSLIAVILFVFVVVKFGDKKKREIEISKIKSNLLDKVKEKLANVMNLLAAMETDIGDCLIQMEEELRKKIPLNNVLVIS GNGEKKEYDKIVLTPLIMDFGLKDSGKTNLIYKVRWKPIVAQVEDLCIGIRDYYLYRDKYITGHAEPLFQIIPFMGINTQ NYYSEKDNTTGKSISVSLVQLLDKNFSEFKYDTSPQMRRKKIDAVNWRQFNGDIESIGSYYFLGIKVYPPLGFDPWPEDD IERAKVCYLYQYCIDHNIPITAHCSPGGFLVDDDFKNFSSPYKWEQVLDYTDEKNNKPFERLRLNLAHFGGADSKVWRKK IADMILKKDTVSSKYKYENLYTDISYQGVDKKSYDALKDLLDRYDSAERARLIERLIFGSDFMINLQDINSYSQYLDFFF KTNALTLEEKDMLCNKNAERFLFVG >Mature_505_residues MKKGVDMRYFYDSHCHMMNLSHPNLSAIIKRIYNDSIKPLLLKYSVYLKAALLLLLFVIPVVVITLLLTGHFVVIKWILY AVSLIAVILFVFVVVKFGDKKKREIEISKIKSNLLDKVKEKLANVMNLLAAMETDIGDCLIQMEEELRKKIPLNNVLVIS GNGEKKEYDKIVLTPLIMDFGLKDSGKTNLIYKVRWKPIVAQVEDLCIGIRDYYLYRDKYITGHAEPLFQIIPFMGINTQ NYYSEKDNTTGKSISVSLVQLLDKNFSEFKYDTSPQMRRKKIDAVNWRQFNGDIESIGSYYFLGIKVYPPLGFDPWPEDD IERAKVCYLYQYCIDHNIPITAHCSPGGFLVDDDFKNFSSPYKWEQVLDYTDEKNNKPFERLRLNLAHFGGADSKVWRKK IADMILKKDTVSSKYKYENLYTDISYQGVDKKSYDALKDLLDRYDSAERARLIERLIFGSDFMINLQDINSYSQYLDFFF KTNALTLEEKDMLCNKNAERFLFVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58773; Mature: 58773
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGVDMRYFYDSHCHMMNLSHPNLSAIIKRIYNDSIKPLLLKYSVYLKAALLLLLFVIP CCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH VVVITLLLTGHFVVIKWILYAVSLIAVILFVFVVVKFGDKKKREIEISKIKSNLLDKVKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH KLANVMNLLAAMETDIGDCLIQMEEELRKKIPLNNVLVISGNGEKKEYDKIVLTPLIMDF HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHC GLKDSGKTNLIYKVRWKPIVAQVEDLCIGIRDYYLYRDKYITGHAEPLFQIIPFMGINTQ CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHEEECCEECCCCHHHHHHHCCCCCCCC NYYSEKDNTTGKSISVSLVQLLDKNFSEFKYDTSPQMRRKKIDAVNWRQFNGDIESIGSY CCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCCHHHHHHHCCCCCCHHCCCCHHHCCCE YFLGIKVYPPLGFDPWPEDDIERAKVCYLYQYCIDHNIPITAHCSPGGFLVDDDFKNFSS EEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCHHCCCC PYKWEQVLDYTDEKNNKPFERLRLNLAHFGGADSKVWRKKIADMILKKDTVSSKYKYENL CCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH YTDISYQGVDKKSYDALKDLLDRYDSAERARLIERLIFGSDFMINLQDINSYSQYLDFFF EECCEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH KTNALTLEEKDMLCNKNAERFLFVG HCCCEEEEHHHHHHCCCCCEEEEEC >Mature Secondary Structure MKKGVDMRYFYDSHCHMMNLSHPNLSAIIKRIYNDSIKPLLLKYSVYLKAALLLLLFVIP CCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH VVVITLLLTGHFVVIKWILYAVSLIAVILFVFVVVKFGDKKKREIEISKIKSNLLDKVKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH KLANVMNLLAAMETDIGDCLIQMEEELRKKIPLNNVLVISGNGEKKEYDKIVLTPLIMDF HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHC GLKDSGKTNLIYKVRWKPIVAQVEDLCIGIRDYYLYRDKYITGHAEPLFQIIPFMGINTQ CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHEEECCEECCCCHHHHHHHCCCCCCCC NYYSEKDNTTGKSISVSLVQLLDKNFSEFKYDTSPQMRRKKIDAVNWRQFNGDIESIGSY CCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCCHHHHHHHCCCCCCHHCCCCHHHCCCE YFLGIKVYPPLGFDPWPEDDIERAKVCYLYQYCIDHNIPITAHCSPGGFLVDDDFKNFSS EEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCHHCCCC PYKWEQVLDYTDEKNNKPFERLRLNLAHFGGADSKVWRKKIADMILKKDTVSSKYKYENL CCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH YTDISYQGVDKKSYDALKDLLDRYDSAERARLIERLIFGSDFMINLQDINSYSQYLDFFF EECCEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH KTNALTLEEKDMLCNKNAERFLFVG HCCCEEEEHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA