Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21673910

Identifier: 21673910

GI number: 21673910

Start: 1022449

End: 1023336

Strand: Direct

Name: 21673910

Synonym: CT1084

Alternate gene names: NA

Gene position: 1022449-1023336 (Clockwise)

Preceding gene: 21673906

Following gene: 21673912

Centisome position: 47.45

GC content: 53.27

Gene sequence:

>888_bases
ATGCATTTTGTCATTACCGGTTCATTGGGCCACATCGGCAAACCGCTTGCAATTCAGTTGAGCAAAGAAGGCCACGCAGT
GACGGTCGTCAGCAGCAACACCGAAAGAATAAAGGAGATCGAGTCGATCGGCGCCAAAGCGGCCATCGGCAGTGTGGAAG
ATCCCGGATTCCTCACCGAGACCTTCCGAGGCGCGGACGCCGTTTTTACGATGGTACCGCCGAATATGAATGCCGCTGAC
TGGAAAGCCTGGATCGCCGGAATCGGCAAGAATTATGTGGCGGCCATCAAAGAGTCGGGTGTCAAACACGTGGTGAACTT
GAGCAGCATCGGTGCCCATATGGTCGATAAATGCGGTCCGGTCAGCGGTCTTTCACAGGTCGAATTGGCTATGGACGAAA
TGAAAGGTGTGAACGTCCACCATCTGAGGGCAGGCTACTTTTACACCAACTTCCTGAACAGCATTGGTCAGATCAAAAAT
CAGGGTATCATCACCGGTAACTACATGCCCGATCTGAAAATGGTGCTGGTGCATCCGGCAGACATCGCCGATATCGCCGC
CAGGGCGCTCAAGGATGAATCGTACCTCGGCAGAGGCTTCAGCTACATTGCCAGTGACGAAAAAACTCCGGCTGAGATCG
TCACCATACTCGGCAAGGCAACCGGCAGAATGGATCTCAAATGGGTTGAACGCACCGACAAGGAAGAATACGATGACCTG
ATCGCTATCGGCCTGCCAGAGGAGATCGCCAAAAATTATACCGAAATGGGAGCCGCCCTGCGGTCAGGAGATATGAATGC
GGACTATTTCCGCAACCGTCCGGTCATGGCCGGCTGGAGAACGTTTGATTCGTTTATGCCCGAATTTATCGCGACCTACA
ACGCGTGA

Upstream 100 bases:

>100_bases
GGGCTGGTTGATTTGTCAGATTCTTCGGTAAGTATTTGCATTTTCCGTGATGCCGGTGCAAGAAGGTAGCCCGTCATCTG
CAACGTTTAAACTTACACCT

Downstream 100 bases:

>100_bases
CAAGCATCTTCCAGAAGGCTGTTATTACCTCCGGGAATTTCTCCTGTTAACTGTTAAGACAATTGCATTGAAACGCCGCA
GCTTTGCGGCGTTTTTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; NmrA-Like; Oxidoreductase; Nucleotide-Diphosphate-Sugar Epimerase; NAD-Dependent Epimerase/Dehydratase; Sugar Nucleotide Epimerase; Nmra-Like Protein; Nucleoside-Diphosphate Sugar Epimerase; Nucleotide-Diphosphate-Sugar Epimerase/NmrA Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; TrkA-N Domain-Containing Protein

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MHFVITGSLGHIGKPLAIQLSKEGHAVTVVSSNTERIKEIESIGAKAAIGSVEDPGFLTETFRGADAVFTMVPPNMNAAD
WKAWIAGIGKNYVAAIKESGVKHVVNLSSIGAHMVDKCGPVSGLSQVELAMDEMKGVNVHHLRAGYFYTNFLNSIGQIKN
QGIITGNYMPDLKMVLVHPADIADIAARALKDESYLGRGFSYIASDEKTPAEIVTILGKATGRMDLKWVERTDKEEYDDL
IAIGLPEEIAKNYTEMGAALRSGDMNADYFRNRPVMAGWRTFDSFMPEFIATYNA

Sequences:

>Translated_295_residues
MHFVITGSLGHIGKPLAIQLSKEGHAVTVVSSNTERIKEIESIGAKAAIGSVEDPGFLTETFRGADAVFTMVPPNMNAAD
WKAWIAGIGKNYVAAIKESGVKHVVNLSSIGAHMVDKCGPVSGLSQVELAMDEMKGVNVHHLRAGYFYTNFLNSIGQIKN
QGIITGNYMPDLKMVLVHPADIADIAARALKDESYLGRGFSYIASDEKTPAEIVTILGKATGRMDLKWVERTDKEEYDDL
IAIGLPEEIAKNYTEMGAALRSGDMNADYFRNRPVMAGWRTFDSFMPEFIATYNA
>Mature_295_residues
MHFVITGSLGHIGKPLAIQLSKEGHAVTVVSSNTERIKEIESIGAKAAIGSVEDPGFLTETFRGADAVFTMVPPNMNAAD
WKAWIAGIGKNYVAAIKESGVKHVVNLSSIGAHMVDKCGPVSGLSQVELAMDEMKGVNVHHLRAGYFYTNFLNSIGQIKN
QGIITGNYMPDLKMVLVHPADIADIAARALKDESYLGRGFSYIASDEKTPAEIVTILGKATGRMDLKWVERTDKEEYDDL
IAIGLPEEIAKNYTEMGAALRSGDMNADYFRNRPVMAGWRTFDSFMPEFIATYNA

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32179; Mature: 32179

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFVITGSLGHIGKPLAIQLSKEGHAVTVVSSNTERIKEIESIGAKAAIGSVEDPGFLTE
CEEEEECCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHCCCHHCCCCCCCCCHHHH
TFRGADAVFTMVPPNMNAADWKAWIAGIGKNYVAAIKESGVKHVVNLSSIGAHMVDKCGP
HHCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
VSGLSQVELAMDEMKGVNVHHLRAGYFYTNFLNSIGQIKNQGIITGNYMPDLKMVLVHPA
CCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCC
DIADIAARALKDESYLGRGFSYIASDEKTPAEIVTILGKATGRMDLKWVERTDKEEYDDL
CHHHHHHHHHCCHHHHCCCCHHHCCCCCCHHHHHHHHHHCCCCCEEHHHHHCCHHHHHCE
IAIGLPEEIAKNYTEMGAALRSGDMNADYFRNRPVMAGWRTFDSFMPEFIATYNA
EEECCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHFVITGSLGHIGKPLAIQLSKEGHAVTVVSSNTERIKEIESIGAKAAIGSVEDPGFLTE
CEEEEECCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHCCCHHCCCCCCCCCHHHH
TFRGADAVFTMVPPNMNAADWKAWIAGIGKNYVAAIKESGVKHVVNLSSIGAHMVDKCGP
HHCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
VSGLSQVELAMDEMKGVNVHHLRAGYFYTNFLNSIGQIKNQGIITGNYMPDLKMVLVHPA
CCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCC
DIADIAARALKDESYLGRGFSYIASDEKTPAEIVTILGKATGRMDLKWVERTDKEEYDDL
CHHHHHHHHHCCHHHHCCCCHHHCCCCCCHHHHHHHHHHCCCCCEEHHHHHCCHHHHHCE
IAIGLPEEIAKNYTEMGAALRSGDMNADYFRNRPVMAGWRTFDSFMPEFIATYNA
EEECCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA