| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673910
Identifier: 21673910
GI number: 21673910
Start: 1022449
End: 1023336
Strand: Direct
Name: 21673910
Synonym: CT1084
Alternate gene names: NA
Gene position: 1022449-1023336 (Clockwise)
Preceding gene: 21673906
Following gene: 21673912
Centisome position: 47.45
GC content: 53.27
Gene sequence:
>888_bases ATGCATTTTGTCATTACCGGTTCATTGGGCCACATCGGCAAACCGCTTGCAATTCAGTTGAGCAAAGAAGGCCACGCAGT GACGGTCGTCAGCAGCAACACCGAAAGAATAAAGGAGATCGAGTCGATCGGCGCCAAAGCGGCCATCGGCAGTGTGGAAG ATCCCGGATTCCTCACCGAGACCTTCCGAGGCGCGGACGCCGTTTTTACGATGGTACCGCCGAATATGAATGCCGCTGAC TGGAAAGCCTGGATCGCCGGAATCGGCAAGAATTATGTGGCGGCCATCAAAGAGTCGGGTGTCAAACACGTGGTGAACTT GAGCAGCATCGGTGCCCATATGGTCGATAAATGCGGTCCGGTCAGCGGTCTTTCACAGGTCGAATTGGCTATGGACGAAA TGAAAGGTGTGAACGTCCACCATCTGAGGGCAGGCTACTTTTACACCAACTTCCTGAACAGCATTGGTCAGATCAAAAAT CAGGGTATCATCACCGGTAACTACATGCCCGATCTGAAAATGGTGCTGGTGCATCCGGCAGACATCGCCGATATCGCCGC CAGGGCGCTCAAGGATGAATCGTACCTCGGCAGAGGCTTCAGCTACATTGCCAGTGACGAAAAAACTCCGGCTGAGATCG TCACCATACTCGGCAAGGCAACCGGCAGAATGGATCTCAAATGGGTTGAACGCACCGACAAGGAAGAATACGATGACCTG ATCGCTATCGGCCTGCCAGAGGAGATCGCCAAAAATTATACCGAAATGGGAGCCGCCCTGCGGTCAGGAGATATGAATGC GGACTATTTCCGCAACCGTCCGGTCATGGCCGGCTGGAGAACGTTTGATTCGTTTATGCCCGAATTTATCGCGACCTACA ACGCGTGA
Upstream 100 bases:
>100_bases GGGCTGGTTGATTTGTCAGATTCTTCGGTAAGTATTTGCATTTTCCGTGATGCCGGTGCAAGAAGGTAGCCCGTCATCTG CAACGTTTAAACTTACACCT
Downstream 100 bases:
>100_bases CAAGCATCTTCCAGAAGGCTGTTATTACCTCCGGGAATTTCTCCTGTTAACTGTTAAGACAATTGCATTGAAACGCCGCA GCTTTGCGGCGTTTTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; NmrA-Like; Oxidoreductase; Nucleotide-Diphosphate-Sugar Epimerase; NAD-Dependent Epimerase/Dehydratase; Sugar Nucleotide Epimerase; Nmra-Like Protein; Nucleoside-Diphosphate Sugar Epimerase; Nucleotide-Diphosphate-Sugar Epimerase/NmrA Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; TrkA-N Domain-Containing Protein
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MHFVITGSLGHIGKPLAIQLSKEGHAVTVVSSNTERIKEIESIGAKAAIGSVEDPGFLTETFRGADAVFTMVPPNMNAAD WKAWIAGIGKNYVAAIKESGVKHVVNLSSIGAHMVDKCGPVSGLSQVELAMDEMKGVNVHHLRAGYFYTNFLNSIGQIKN QGIITGNYMPDLKMVLVHPADIADIAARALKDESYLGRGFSYIASDEKTPAEIVTILGKATGRMDLKWVERTDKEEYDDL IAIGLPEEIAKNYTEMGAALRSGDMNADYFRNRPVMAGWRTFDSFMPEFIATYNA
Sequences:
>Translated_295_residues MHFVITGSLGHIGKPLAIQLSKEGHAVTVVSSNTERIKEIESIGAKAAIGSVEDPGFLTETFRGADAVFTMVPPNMNAAD WKAWIAGIGKNYVAAIKESGVKHVVNLSSIGAHMVDKCGPVSGLSQVELAMDEMKGVNVHHLRAGYFYTNFLNSIGQIKN QGIITGNYMPDLKMVLVHPADIADIAARALKDESYLGRGFSYIASDEKTPAEIVTILGKATGRMDLKWVERTDKEEYDDL IAIGLPEEIAKNYTEMGAALRSGDMNADYFRNRPVMAGWRTFDSFMPEFIATYNA >Mature_295_residues MHFVITGSLGHIGKPLAIQLSKEGHAVTVVSSNTERIKEIESIGAKAAIGSVEDPGFLTETFRGADAVFTMVPPNMNAAD WKAWIAGIGKNYVAAIKESGVKHVVNLSSIGAHMVDKCGPVSGLSQVELAMDEMKGVNVHHLRAGYFYTNFLNSIGQIKN QGIITGNYMPDLKMVLVHPADIADIAARALKDESYLGRGFSYIASDEKTPAEIVTILGKATGRMDLKWVERTDKEEYDDL IAIGLPEEIAKNYTEMGAALRSGDMNADYFRNRPVMAGWRTFDSFMPEFIATYNA
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32179; Mature: 32179
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFVITGSLGHIGKPLAIQLSKEGHAVTVVSSNTERIKEIESIGAKAAIGSVEDPGFLTE CEEEEECCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHCCCHHCCCCCCCCCHHHH TFRGADAVFTMVPPNMNAADWKAWIAGIGKNYVAAIKESGVKHVVNLSSIGAHMVDKCGP HHCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC VSGLSQVELAMDEMKGVNVHHLRAGYFYTNFLNSIGQIKNQGIITGNYMPDLKMVLVHPA CCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCC DIADIAARALKDESYLGRGFSYIASDEKTPAEIVTILGKATGRMDLKWVERTDKEEYDDL CHHHHHHHHHCCHHHHCCCCHHHCCCCCCHHHHHHHHHHCCCCCEEHHHHHCCHHHHHCE IAIGLPEEIAKNYTEMGAALRSGDMNADYFRNRPVMAGWRTFDSFMPEFIATYNA EEECCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHFVITGSLGHIGKPLAIQLSKEGHAVTVVSSNTERIKEIESIGAKAAIGSVEDPGFLTE CEEEEECCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHCCCHHCCCCCCCCCHHHH TFRGADAVFTMVPPNMNAADWKAWIAGIGKNYVAAIKESGVKHVVNLSSIGAHMVDKCGP HHCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC VSGLSQVELAMDEMKGVNVHHLRAGYFYTNFLNSIGQIKNQGIITGNYMPDLKMVLVHPA CCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCC DIADIAARALKDESYLGRGFSYIASDEKTPAEIVTILGKATGRMDLKWVERTDKEEYDDL CHHHHHHHHHCCHHHHCCCCHHHCCCCCCHHHHHHHHHHCCCCCEEHHHHHCCHHHHHCE IAIGLPEEIAKNYTEMGAALRSGDMNADYFRNRPVMAGWRTFDSFMPEFIATYNA EEECCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA