Click here to switch to the map view.

The map label for this gene is 21673908

Identifier: 21673908

GI number: 21673908

Start: 1021267

End: 1022151

Strand: Reverse

Name: 21673908

Synonym: CT1082

Alternate gene names: NA

Gene position: 1022151-1021267 (Counterclockwise)

Preceding gene: 21673909

Following gene: 21673907

Centisome position: 47.43

GC content: 51.98

Gene sequence:

>885_bases
ATGAAATTAGATCTCGACGCTTTCAGGATTCAGCCGGGCAAAAAGCCGAATCTCGCCAAACGGCCAACCCGGATTGATCC
GGTGTACCGCTCGAAAGGGGAGTACCACGAACTTCTGGCCAACCATGTCGCAGAGTTGAGCAAACTTCAGAATGTTCTTT
ATGCGGACAACCGCTATGCCATACTGCTGATTTTTCAGGCTATGGATGCTGCCGGAAAGGACAGCGCCATCAAGCATGTG
ATGTCGGGCGTCAATCCGCAGGGATGCCAGGTTTACAGCTTCAAGCATCCGTCAGCCACGGAACTCGAACACGATTTTCT
CTGGCGAACCAACTGCGTCCTGCCTGAACGGGGCCGAATCGGTATTTTCAACCGCTCTTATTACGAGGAGGTACTTGTCG
TCCGGGTACATCCGGAAATTCTTGAAATGCAGAACATCCCTCACAATCTTGCCCATAACGGCAAAGTGTGGGATCACCGG
TACCGCTCAATTGTCAGCCACGAACAGCATCTTCACTGCAACGGTACTCGTATTGTCAAGTTTTATCTGCATTTGTCGAA
GGAGGAGCAGCGCAAGCGCTTTCTTGAGCGGATCGATGACCCAAACAAAAACTGGAAATTCAGTACCGCCGATCTCGAAG
AGCGGAAATTCTGGGATCAGTACATGGAGGCGTACGAGTCTTGCCTCCAGGAGACCAGCACTAAAGATTCTCCGTGGTTC
GCAGTTCCGGCTGACGATAAAAAGAATGCACGCCTGATCGTTTCGCGCATCGTGCTCGACACGCTCGAAAGCCTCAATCT
CAAATATCCCGAGCCCAGCCCGGAACGCCGCAAAGAGCTGCTCGATATTCGCAAGCGGCTCGAAAATCCGGAGAACGGAA
AGTGA

Upstream 100 bases:

>100_bases
TATGATTCAATTCTGTTTTTTGCGAACTTGAAAAATAGATATATCATTACTTGACAATCCGATTGCCTCTTTTCGGTAAC
GTTTTCACGGGAGAATCTTC

Downstream 100 bases:

>100_bases
CCGTTTTCATGATGAGATATACCGATAAAACCCATCAGCAATTGCTCAACCATGCCGCACCGGCAATCAAGCACTCCATG
ATGTCTCCTGGAGCATGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: URF2 [H]

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKLDLDAFRIQPGKKPNLAKRPTRIDPVYRSKGEYHELLANHVAELSKLQNVLYADNRYAILLIFQAMDAAGKDSAIKHV
MSGVNPQGCQVYSFKHPSATELEHDFLWRTNCVLPERGRIGIFNRSYYEEVLVVRVHPEILEMQNIPHNLAHNGKVWDHR
YRSIVSHEQHLHCNGTRIVKFYLHLSKEEQRKRFLERIDDPNKNWKFSTADLEERKFWDQYMEAYESCLQETSTKDSPWF
AVPADDKKNARLIVSRIVLDTLESLNLKYPEPSPERRKELLDIRKRLENPENGK

Sequences:

>Translated_294_residues
MKLDLDAFRIQPGKKPNLAKRPTRIDPVYRSKGEYHELLANHVAELSKLQNVLYADNRYAILLIFQAMDAAGKDSAIKHV
MSGVNPQGCQVYSFKHPSATELEHDFLWRTNCVLPERGRIGIFNRSYYEEVLVVRVHPEILEMQNIPHNLAHNGKVWDHR
YRSIVSHEQHLHCNGTRIVKFYLHLSKEEQRKRFLERIDDPNKNWKFSTADLEERKFWDQYMEAYESCLQETSTKDSPWF
AVPADDKKNARLIVSRIVLDTLESLNLKYPEPSPERRKELLDIRKRLENPENGK
>Mature_294_residues
MKLDLDAFRIQPGKKPNLAKRPTRIDPVYRSKGEYHELLANHVAELSKLQNVLYADNRYAILLIFQAMDAAGKDSAIKHV
MSGVNPQGCQVYSFKHPSATELEHDFLWRTNCVLPERGRIGIFNRSYYEEVLVVRVHPEILEMQNIPHNLAHNGKVWDHR
YRSIVSHEQHLHCNGTRIVKFYLHLSKEEQRKRFLERIDDPNKNWKFSTADLEERKFWDQYMEAYESCLQETSTKDSPWF
AVPADDKKNARLIVSRIVLDTLESLNLKYPEPSPERRKELLDIRKRLENPENGK

Specific function: Unknown

COG id: COG2326

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011993
- InterPro:   IPR022488 [H]

Pfam domain/function: PF03976 PPK2 [H]

EC number: NA

Molecular weight: Translated: 34576; Mature: 34576

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDLDAFRIQPGKKPNLAKRPTRIDPVYRSKGEYHELLANHVAELSKLQNVLYADNRYA
CCCCCCHHEECCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
ILLIFQAMDAAGKDSAIKHVMSGVNPQGCQVYSFKHPSATELEHDFLWRTNCVLPERGRI
EEEEEEHHCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHEECCCCCCCCCCE
GIFNRSYYEEVLVVRVHPEILEMQNIPHNLAHNGKVWDHRYRSIVSHEQHLHCNGTRIVK
EEECHHHHHEEEEEEECHHHHHHHCCCHHHCCCCCHHHHHHHHHHCCCCEEECCCCEEEE
FYLHLSKEEQRKRFLERIDDPNKNWKFSTADLEERKFWDQYMEAYESCLQETSTKDSPWF
EEHHHCHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
AVPADDKKNARLIVSRIVLDTLESLNLKYPEPSPERRKELLDIRKRLENPENGK
EECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKLDLDAFRIQPGKKPNLAKRPTRIDPVYRSKGEYHELLANHVAELSKLQNVLYADNRYA
CCCCCCHHEECCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
ILLIFQAMDAAGKDSAIKHVMSGVNPQGCQVYSFKHPSATELEHDFLWRTNCVLPERGRI
EEEEEEHHCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHEECCCCCCCCCCE
GIFNRSYYEEVLVVRVHPEILEMQNIPHNLAHNGKVWDHRYRSIVSHEQHLHCNGTRIVK
EEECHHHHHEEEEEEECHHHHHHHCCCHHHCCCCCHHHHHHHHHHCCCCEEECCCCEEEE
FYLHLSKEEQRKRFLERIDDPNKNWKFSTADLEERKFWDQYMEAYESCLQETSTKDSPWF
EEHHHCHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
AVPADDKKNARLIVSRIVLDTLESLNLKYPEPSPERRKELLDIRKRLENPENGK
EECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8199775 [H]