Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is yecA [C]

Identifier: 21673892

GI number: 21673892

Start: 1001942

End: 1002553

Strand: Reverse

Name: yecA [C]

Synonym: CT1066

Alternate gene names: 21673892

Gene position: 1002553-1001942 (Counterclockwise)

Preceding gene: 21673893

Following gene: 21673891

Centisome position: 46.52

GC content: 54.9

Gene sequence:

>612_bases
ATGCTGCAATCAGAACGAGCCCATCAACCGCTCTCCGAAGAAGAGCTGAATATGCTCGAAACATTCCTGGCCTCCACGGA
GGCCCCTGAAGAGTGCATGAACTCCATCGAAATGATAGATGGCTTTTTGACTGCCGTCGTCATTGGGCCGGAGGTTGTCC
CTGAGCACCGGTGGATCAAGTACATGCTCGATCCCGAAAACCAGCGGGAAAATCTCTTCAACTCGCCTGAAGACGAGTCG
CGGATTACCGATCTGCTGAACCGGCACGTCAACGCTATCGACGCCCAGTTTGAAAGCGAACCGGAAGGATTCCTGCCGAT
CTATGAAATGTTCAGCTACTCCGAAGAGGAGGAGCGGCAGATCGCCATCGAGGAGTGGGCGCTCGGCTTTATCCTCGGCA
TGGAGCTGAGCCACGAGGCCTGGCAGCCGCTGTTCGCCGATGAATCAACGGCCATGCTCGCCGGGCCGCTTTTTGTGCTT
GGCAAAGTCACCGACGACTACGATAACATGTCGCAGGAGGAGAAAGATCAGATGATCGACATGCTCGACGAGTCGATCAT
CGGCATCTACGCTTTCTGGCAGCAACAGGCTGAAGAAGAAAAAGGAGTGTGA

Upstream 100 bases:

>100_bases
CCGAAACGCTGCTACTGGACACCGAAAGTATAACGCACGGCACTCTTTTCCAGCAAACCGAATTTCTCGGGGACATATTC
ACAACCATCAACAGACCATT

Downstream 100 bases:

>100_bases
ACGGAAGTGATCGGCCGGATAAGGTCAGATGCCATATTTCAAATAAAAAAGCCGGGTTGTTACAAGTCCGGCTTTTTTCA
TGTCAACTACAGGTTACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: YgfB And YecA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MLQSERAHQPLSEEELNMLETFLASTEAPEECMNSIEMIDGFLTAVVIGPEVVPEHRWIKYMLDPENQRENLFNSPEDES
RITDLLNRHVNAIDAQFESEPEGFLPIYEMFSYSEEEERQIAIEEWALGFILGMELSHEAWQPLFADESTAMLAGPLFVL
GKVTDDYDNMSQEEKDQMIDMLDESIIGIYAFWQQQAEEEKGV

Sequences:

>Translated_203_residues
MLQSERAHQPLSEEELNMLETFLASTEAPEECMNSIEMIDGFLTAVVIGPEVVPEHRWIKYMLDPENQRENLFNSPEDES
RITDLLNRHVNAIDAQFESEPEGFLPIYEMFSYSEEEERQIAIEEWALGFILGMELSHEAWQPLFADESTAMLAGPLFVL
GKVTDDYDNMSQEEKDQMIDMLDESIIGIYAFWQQQAEEEKGV
>Mature_203_residues
MLQSERAHQPLSEEELNMLETFLASTEAPEECMNSIEMIDGFLTAVVIGPEVVPEHRWIKYMLDPENQRENLFNSPEDES
RITDLLNRHVNAIDAQFESEPEGFLPIYEMFSYSEEEERQIAIEEWALGFILGMELSHEAWQPLFADESTAMLAGPLFVL
GKVTDDYDNMSQEEKDQMIDMLDESIIGIYAFWQQQAEEEKGV

Specific function: Unknown

COG id: COG3318

COG function: function code R; Predicted metal-binding protein related to the C-terminal domain of SecA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23434; Mature: 23434

Theoretical pI: Translated: 3.70; Mature: 3.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQSERAHQPLSEEELNMLETFLASTEAPEECMNSIEMIDGFLTAVVIGPEVVPEHRWIK
CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHEE
YMLDPENQRENLFNSPEDESRITDLLNRHVNAIDAQFESEPEGFLPIYEMFSYSEEEERQ
EEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHH
IAIEEWALGFILGMELSHEAWQPLFADESTAMLAGPLFVLGKVTDDYDNMSQEEKDQMID
HHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHCCCHHHHHHHHH
MLDESIIGIYAFWQQQAEEEKGV
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLQSERAHQPLSEEELNMLETFLASTEAPEECMNSIEMIDGFLTAVVIGPEVVPEHRWIK
CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHEE
YMLDPENQRENLFNSPEDESRITDLLNRHVNAIDAQFESEPEGFLPIYEMFSYSEEEERQ
EEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHH
IAIEEWALGFILGMELSHEAWQPLFADESTAMLAGPLFVLGKVTDDYDNMSQEEKDQMID
HHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHCCCHHHHHHHHH
MLDESIIGIYAFWQQQAEEEKGV
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA