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The map label for this gene is fccB [H]

Identifier: 21673852

GI number: 21673852

Start: 964940

End: 966166

Strand: Direct

Name: fccB [H]

Synonym: CT1025

Alternate gene names: 21673852

Gene position: 964940-966166 (Clockwise)

Preceding gene: 21673851

Following gene: 21673853

Centisome position: 44.78

GC content: 53.14

Gene sequence:

>1227_bases
ATGTCTAAAAAAATCGTCGTATTGGGAGCGGGTACCGCCGGAACGATTGTCTCGAACAATCTGAGGCGTCACCTCCCGGC
AGACTGGGAAATCACGGTTATCGATCGTGATGACGACCACATTTATCAGCCGGGTCTTCTGTTCGTGCCGTTCGGAGTTC
AGAAATCGAGCACTCTGGTCAAATCGAGGAAGAAGTACATTACTGCGGGTATCAATTTCGTCATGGATGAAATCACCCAT
ATCGATCCGGAAAAGAAAGAGGTCAAGACCAAAAACCACACGTTTACCTACGACTTTCTCGTTATCAGTACCGGTTGCCG
TATCGCTCCGGAAGAGAATGAGGGTTTGATGGAGGCCTGGGGCAAGAATGCCTTCACCTTCTACTACAAGGAGGCGGCTG
ATCAGCTCAGGCTGCGCCTGAAAGAGTTCGATGGTGGAAAGCTGGTCATGAACATCGCCGAGCTGCCGTTCAAATGCCCG
GTGGCGCCGATCGAGTTTGTCTTTATGGCGGACTGGTTCCTGAAAAAGAAGGGGGTCAGGAACAAATCGGAAATCGAGCT
GGTCACGCCGTTGCCGATGGCCTTCACCAAGCCCAAGGCAGCTGCGGTATTCACCGAGTCGGCGAGGGAGAAAAACATCA
AGATCACCACGAGCTTCGAGCTCAACCGTGTCGATGGCAAGGAGAAATTCATCGAGTCAGTACAGGGCGACAAGGTGAAG
TATGATACCCTGGTTATTGTGCCGACCACGATCGGTGATCCGGTAATCAGCAACTCCGGTATCGACGACGGTATCGGTTA
CGTGCCAACGCACCACAATACGCTCAAGGCGCTCAAGCACGATGGTGTCTATGTGATCGGCGACGCCACCAACGTACCGA
CCTCAAAGGCCGGTTCGGTTGCACACTACGAGGCGGACGTCGTGGTCTTCAACATCATGGCCGAAATCTATGGCGCCAAG
CCGGAGGAGATTTTCGATGGCCACTCGACCTGCTTCATCGTCTATTCGAAAGGCACCGCCTCGCTGATCGACTTCAATTA
CAAAATCGAGCCGTTGCCGGGCAAGTTCCCGATGCCAAAGCTTGGGCCATTCTCACTGTTGAAGGAGACCAAGATGAACT
GGTATGGCAAGCTCGCCTTCGAGCCGCTCTACTGGAACGTCCTGCTCGATGGCAAACACCTTGGTATGCCTCCTACCCTT
GTTATGGCCGGTAAAGAGGTCGGATAA

Upstream 100 bases:

>100_bases
AGCGACCTGTTGAAATGACGCATCGTTATGATGCCTTGGGCCGTGTCTCTGTTGCTTTTCCCATTTCAACTCAAAACAAC
AAGCGCTGGAGGCTGCGAGT

Downstream 100 bases:

>100_bases
GGTTTTTTTGCTGCCGCAGCCGGATTTTCCAGCCGGGGGTTTGTTGAAAAGCAGACTCCCGGCTGTTTTTTGTTGTCAAC
GCCAATCTTTTGGAACGTTT

Product: sulfide dehydrogenase, flavoprotein subunit, putative

Products: NA

Alternate protein names: FCSD; Flavocytochrome c flavoprotein subunit; FC [H]

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MSKKIVVLGAGTAGTIVSNNLRRHLPADWEITVIDRDDDHIYQPGLLFVPFGVQKSSTLVKSRKKYITAGINFVMDEITH
IDPEKKEVKTKNHTFTYDFLVISTGCRIAPEENEGLMEAWGKNAFTFYYKEAADQLRLRLKEFDGGKLVMNIAELPFKCP
VAPIEFVFMADWFLKKKGVRNKSEIELVTPLPMAFTKPKAAAVFTESAREKNIKITTSFELNRVDGKEKFIESVQGDKVK
YDTLVIVPTTIGDPVISNSGIDDGIGYVPTHHNTLKALKHDGVYVIGDATNVPTSKAGSVAHYEADVVVFNIMAEIYGAK
PEEIFDGHSTCFIVYSKGTASLIDFNYKIEPLPGKFPMPKLGPFSLLKETKMNWYGKLAFEPLYWNVLLDGKHLGMPPTL
VMAGKEVG

Sequences:

>Translated_408_residues
MSKKIVVLGAGTAGTIVSNNLRRHLPADWEITVIDRDDDHIYQPGLLFVPFGVQKSSTLVKSRKKYITAGINFVMDEITH
IDPEKKEVKTKNHTFTYDFLVISTGCRIAPEENEGLMEAWGKNAFTFYYKEAADQLRLRLKEFDGGKLVMNIAELPFKCP
VAPIEFVFMADWFLKKKGVRNKSEIELVTPLPMAFTKPKAAAVFTESAREKNIKITTSFELNRVDGKEKFIESVQGDKVK
YDTLVIVPTTIGDPVISNSGIDDGIGYVPTHHNTLKALKHDGVYVIGDATNVPTSKAGSVAHYEADVVVFNIMAEIYGAK
PEEIFDGHSTCFIVYSKGTASLIDFNYKIEPLPGKFPMPKLGPFSLLKETKMNWYGKLAFEPLYWNVLLDGKHLGMPPTL
VMAGKEVG
>Mature_407_residues
SKKIVVLGAGTAGTIVSNNLRRHLPADWEITVIDRDDDHIYQPGLLFVPFGVQKSSTLVKSRKKYITAGINFVMDEITHI
DPEKKEVKTKNHTFTYDFLVISTGCRIAPEENEGLMEAWGKNAFTFYYKEAADQLRLRLKEFDGGKLVMNIAELPFKCPV
APIEFVFMADWFLKKKGVRNKSEIELVTPLPMAFTKPKAAAVFTESAREKNIKITTSFELNRVDGKEKFIESVQGDKVKY
DTLVIVPTTIGDPVISNSGIDDGIGYVPTHHNTLKALKHDGVYVIGDATNVPTSKAGSVAHYEADVVVFNIMAEIYGAKP
EEIFDGHSTCFIVYSKGTASLIDFNYKIEPLPGKFPMPKLGPFSLLKETKMNWYGKLAFEPLYWNVLLDGKHLGMPPTLV
MAGKEVG

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI10864011, Length=415, Percent_Identity=25.3012048192771, Blast_Score=141, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI115534373, Length=360, Percent_Identity=24.1666666666667, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17539680, Length=179, Percent_Identity=27.9329608938547, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24657386, Length=374, Percent_Identity=25.668449197861, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24657391, Length=374, Percent_Identity=25.668449197861, Blast_Score=132, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016156
- InterPro:   IPR013027
- InterPro:   IPR015323
- InterPro:   IPR015904
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09242 FCSD-flav_bind; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 45493; Mature: 45362

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKIVVLGAGTAGTIVSNNLRRHLPADWEITVIDRDDDHIYQPGLLFVPFGVQKSSTLV
CCCEEEEEECCCCCCHHHCCHHHHCCCCEEEEEEECCCCCEECCCEEEEECCCCCCHHHH
KSRKKYITAGINFVMDEITHIDPEKKEVKTKNHTFTYDFLVISTGCRIAPEENEGLMEAW
HHHHHEEEHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEEEEEECCCEECCCCCCCHHHHC
GKNAFTFYYKEAADQLRLRLKEFDGGKLVMNIAELPFKCPVAPIEFVFMADWFLKKKGVR
CCCCEEEEEHHHHHHHHHHHEECCCCEEEEEEHHCCCCCCCCCEEHEEHHHHHHHHCCCC
NKSEIELVTPLPMAFTKPKAAAVFTESAREKNIKITTSFELNRVDGKEKFIESVQGDKVK
CCCCEEEECCCCCEECCCCCEEEEECCCCCCCEEEEEEEEEECCCCHHHHHHHHCCCEEE
YDTLVIVPTTIGDPVISNSGIDDGIGYVPTHHNTLKALKHDGVYVIGDATNVPTSKAGSV
EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCE
AHYEADVVVFNIMAEIYGAKPEEIFDGHSTCFIVYSKGTASLIDFNYKIEPLPGKFPMPK
EEEECCEEEEEEHHHHHCCCCHHHHCCCCEEEEEECCCCEEEEEECEEEECCCCCCCCCC
LGPFSLLKETKMNWYGKLAFEPLYWNVLLDGKHLGMPPTLVMAGKEVG
CCHHHHHHHHCCCEEEEEEECEEEEEEEECCCCCCCCCEEEECCCCCC
>Mature Secondary Structure 
SKKIVVLGAGTAGTIVSNNLRRHLPADWEITVIDRDDDHIYQPGLLFVPFGVQKSSTLV
CCEEEEEECCCCCCHHHCCHHHHCCCCEEEEEEECCCCCEECCCEEEEECCCCCCHHHH
KSRKKYITAGINFVMDEITHIDPEKKEVKTKNHTFTYDFLVISTGCRIAPEENEGLMEAW
HHHHHEEEHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEEEEEECCCEECCCCCCCHHHHC
GKNAFTFYYKEAADQLRLRLKEFDGGKLVMNIAELPFKCPVAPIEFVFMADWFLKKKGVR
CCCCEEEEEHHHHHHHHHHHEECCCCEEEEEEHHCCCCCCCCCEEHEEHHHHHHHHCCCC
NKSEIELVTPLPMAFTKPKAAAVFTESAREKNIKITTSFELNRVDGKEKFIESVQGDKVK
CCCCEEEECCCCCEECCCCCEEEEECCCCCCCEEEEEEEEEECCCCHHHHHHHHCCCEEE
YDTLVIVPTTIGDPVISNSGIDDGIGYVPTHHNTLKALKHDGVYVIGDATNVPTSKAGSV
EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCE
AHYEADVVVFNIMAEIYGAKPEEIFDGHSTCFIVYSKGTASLIDFNYKIEPLPGKFPMPK
EEEECCEEEEEEHHHHHCCCCHHHHCCCCEEEEEECCCCEEEEEECEEEECCCCCCCCCC
LGPFSLLKETKMNWYGKLAFEPLYWNVLLDGKHLGMPPTLVMAGKEVG
CCHHHHHHHHCCCEEEEEEECEEEEEEEECCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8390993; 1649169; 7939681 [H]