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The map label for this gene is soxB [H]

Identifier: 21673848

GI number: 21673848

Start: 961806

End: 963656

Strand: Direct

Name: soxB [H]

Synonym: CT1021

Alternate gene names: 21673848

Gene position: 961806-963656 (Clockwise)

Preceding gene: 21673847

Following gene: 21673849

Centisome position: 44.63

GC content: 58.51

Gene sequence:

>1851_bases
ATGTTTCGGGACGAGCCTTTCGAGGCCGACTCTCGCCGCGTCAAGGTAACAAGAGGCTTCACAAACGTTTACGGCAACTC
TAACCGCCATTTATTTATGAACCTGTCACGACGTGAGTTTCTCCGCATTCTCGGATTCGCCGGGGCCGCAGGTATGCTGC
CGAACCTGGCATCTGCAACCAAAGCTTCATCCGACCTTTACGATTTCGGACGTTTCGGCGATATCCGCCTGATGCATATC
ACCGATACCCATGCGCAGCTGATGCCGATCTACTACCGCGAGCCGAGCATGAATCTCGGTCTCGGCTCGGCCTTCGGACG
TCCGCCCCATCTGGTGACGGAGGCGTTCCTGAAGTATTACGGCATCACGCCCGGCACGCCGCTGGCTCACGCGTTTACGG
CGATCAATTACACCGAGGCGGCGCAGCGGTTCGGAAAGGTTGGCGGTTTCGCGCATCTGAAAACGCTTGTTGACAGGATG
CGCGGTGATTTCGGGGCTGACAAGACACTCCTGCTCGATGGCGGCGACACCTGGCAGGGTTCCGGAACGGCTTTTTGGAG
CCGCGGCATGGACATGGTCGAGGCCTGCAATCTGCTCGGCGTGGATGTTATGACCGGGCACTGGGAGTTCACCTATCTCG
AAGATGAGGTGCTCAAGAACCTCGCGGCCTTCAAAGGGGACTTCGTGGCGCAGAATATCAAGGTCAAGGAGGAGGCGCTC
TTCAGCGGCGCGAAGGCGTTCGACGAGAACACCGGGCATGCCTTCCGTCCCTACGTCGTCAAAACGCTGGGCAAGCATCG
CGTGGCTGTTATCGGACAGGCGTTTCCCTACACGCCGATCGCCAATCCGGCAAGATTCATACCCGACTGGACTTTTGGTA
TCAATGCGAGAGACATGCAGGAGCTTGTCGATTCCGTTCGGGCCAAAGAGAAGCCGGATGCGGTTGTACTGATCTCGCAC
AACGGCATGGATGTCGATATCAAGCTCGCCGAAGTGGTCAGTGGCATCGATGTGATTTTCGGTGGTCACACGCATGACGG
CGTGCCGCAGCCCTTCATCGTCAAGAACGCCAGGGGGCGTACTCTCGTGACCAACGCCGGATCAAACGGCAAGTTTCTCG
GCGTCATCGATTTGAAGCTCGGTGATGGCGGCGTCAAGGAGTTCAAGTACAAGTTGCTTCCCGTGTTCGCCAACGAGCTT
CCGGCGCATCAGGGAATGCAGTCACTGATCGATAAAATCCGCGCGCCGTATCTCGACAAGCTCCGGGAGCCGCTGGCCAC
CGCCGGATCGCTGCTCTACCGGCGCGGCAACTTCGACGGCCCCTTTGACCAGATCATCTGCGACGCGCTTCGCCAGCGCA
ACGACGCGCAGATTTCGCTTTCGCCCGGTTTCCGCTGGGGTACGACCATCCTGCCTGGCCAGACCATCACGATGGAGCAC
GTACTCGACCAGACCTGCATGACCTATCCCGAAACGTACGTGCGCGACATGACCGGCCAGCAGATCAAGGACATTCTCGA
AGATGTTGCCGACAACCTCTTTAACCGCGATCCCTTCTACCAGCAGGGCGGCGACATGGTGCGCACTGGCGGCCTCGACT
ACCGGATCGACCCGACGGCTACAATGGGCAAGCGCATCGACAACATGCGGCTTGAAAACGGCACGCCGGTTGAGGCCTCG
AAAAACTATCGTGTCGCGGGCTGGGCGACCGTTGGAGCAAAATCTCCCGGCGAGCCGGTCTGGGATACCGTGGTCGCGTA
TCTGAAAGACAAGAAAGTGGTCGAGGTTACAAAGCTTCATACGCCAGAACTGAAAAACGTTGGCAGCAACCCCGGCATCG
ATCGGTCTTGA

Upstream 100 bases:

>100_bases
GGCGTCACCCTTTTGATTTTTTTACGGGCGCTTCTCACGCATTGTCGCGAAAATTCCGGCAACAGCCAGAAGGGGAGGGC
AGAGAGGCTGGAGTTCCGGA

Downstream 100 bases:

>100_bases
GGCGAGTATCGTCAGTGGACGAGGCTGTTGCAGAAACGAAATCGCGACTGATGCTCGTTTTTGTTCTGAACGGAGGGCTG
GAATGCCTATCCTCTGGCAA

Product: sulfur oxidation protein SoxB

Products: NA

Alternate protein names: 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase; 5'-nucleotidase [H]

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MFRDEPFEADSRRVKVTRGFTNVYGNSNRHLFMNLSRREFLRILGFAGAAGMLPNLASATKASSDLYDFGRFGDIRLMHI
TDTHAQLMPIYYREPSMNLGLGSAFGRPPHLVTEAFLKYYGITPGTPLAHAFTAINYTEAAQRFGKVGGFAHLKTLVDRM
RGDFGADKTLLLDGGDTWQGSGTAFWSRGMDMVEACNLLGVDVMTGHWEFTYLEDEVLKNLAAFKGDFVAQNIKVKEEAL
FSGAKAFDENTGHAFRPYVVKTLGKHRVAVIGQAFPYTPIANPARFIPDWTFGINARDMQELVDSVRAKEKPDAVVLISH
NGMDVDIKLAEVVSGIDVIFGGHTHDGVPQPFIVKNARGRTLVTNAGSNGKFLGVIDLKLGDGGVKEFKYKLLPVFANEL
PAHQGMQSLIDKIRAPYLDKLREPLATAGSLLYRRGNFDGPFDQIICDALRQRNDAQISLSPGFRWGTTILPGQTITMEH
VLDQTCMTYPETYVRDMTGQQIKDILEDVADNLFNRDPFYQQGGDMVRTGGLDYRIDPTATMGKRIDNMRLENGTPVEAS
KNYRVAGWATVGAKSPGEPVWDTVVAYLKDKKVVEVTKLHTPELKNVGSNPGIDRS

Sequences:

>Translated_616_residues
MFRDEPFEADSRRVKVTRGFTNVYGNSNRHLFMNLSRREFLRILGFAGAAGMLPNLASATKASSDLYDFGRFGDIRLMHI
TDTHAQLMPIYYREPSMNLGLGSAFGRPPHLVTEAFLKYYGITPGTPLAHAFTAINYTEAAQRFGKVGGFAHLKTLVDRM
RGDFGADKTLLLDGGDTWQGSGTAFWSRGMDMVEACNLLGVDVMTGHWEFTYLEDEVLKNLAAFKGDFVAQNIKVKEEAL
FSGAKAFDENTGHAFRPYVVKTLGKHRVAVIGQAFPYTPIANPARFIPDWTFGINARDMQELVDSVRAKEKPDAVVLISH
NGMDVDIKLAEVVSGIDVIFGGHTHDGVPQPFIVKNARGRTLVTNAGSNGKFLGVIDLKLGDGGVKEFKYKLLPVFANEL
PAHQGMQSLIDKIRAPYLDKLREPLATAGSLLYRRGNFDGPFDQIICDALRQRNDAQISLSPGFRWGTTILPGQTITMEH
VLDQTCMTYPETYVRDMTGQQIKDILEDVADNLFNRDPFYQQGGDMVRTGGLDYRIDPTATMGKRIDNMRLENGTPVEAS
KNYRVAGWATVGAKSPGEPVWDTVVAYLKDKKVVEVTKLHTPELKNVGSNPGIDRS
>Mature_616_residues
MFRDEPFEADSRRVKVTRGFTNVYGNSNRHLFMNLSRREFLRILGFAGAAGMLPNLASATKASSDLYDFGRFGDIRLMHI
TDTHAQLMPIYYREPSMNLGLGSAFGRPPHLVTEAFLKYYGITPGTPLAHAFTAINYTEAAQRFGKVGGFAHLKTLVDRM
RGDFGADKTLLLDGGDTWQGSGTAFWSRGMDMVEACNLLGVDVMTGHWEFTYLEDEVLKNLAAFKGDFVAQNIKVKEEAL
FSGAKAFDENTGHAFRPYVVKTLGKHRVAVIGQAFPYTPIANPARFIPDWTFGINARDMQELVDSVRAKEKPDAVVLISH
NGMDVDIKLAEVVSGIDVIFGGHTHDGVPQPFIVKNARGRTLVTNAGSNGKFLGVIDLKLGDGGVKEFKYKLLPVFANEL
PAHQGMQSLIDKIRAPYLDKLREPLATAGSLLYRRGNFDGPFDQIICDALRQRNDAQISLSPGFRWGTTILPGQTITMEH
VLDQTCMTYPETYVRDMTGQQIKDILEDVADNLFNRDPFYQQGGDMVRTGGLDYRIDPTATMGKRIDNMRLENGTPVEAS
KNYRVAGWATVGAKSPGEPVWDTVVAYLKDKKVVEVTKLHTPELKNVGSNPGIDRS

Specific function: Catalyzes the release of inorganic phosphate from 2',3'- cyclic nucleotides through consecutive 2',3'-phosphodiesterase and 3'- (or 2') nucleotidase activities. Also possesses a 5'- nucleotidase activity. Does not catalyze the release of inorganic phospha

COG id: COG0737

COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases

Gene ontology:

Cell location: Secreted, cell wall; Peptidoglycan-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5'-nucleotidase family [H]

Homologues:

Organism=Escherichia coli, GI1786687, Length=497, Percent_Identity=24.1448692152917, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008334
- InterPro:   IPR006146
- InterPro:   IPR006179
- InterPro:   IPR019931
- InterPro:   IPR004843
- InterPro:   IPR001899 [H]

Pfam domain/function: PF02872 5_nucleotid_C; PF00149 Metallophos [H]

EC number: =3.1.3.6; =3.1.4.16; =3.1.3.5 [H]

Molecular weight: Translated: 68236; Mature: 68236

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: PS00785 5_NUCLEOTIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRDEPFEADSRRVKVTRGFTNVYGNSNRHLFMNLSRREFLRILGFAGAAGMLPNLASAT
CCCCCCCCCCCCEEEEEECCHHHCCCCCCEEEEECCHHHHHHHHHHCCHHHCCCCHHHHH
KASSDLYDFGRFGDIRLMHITDTHAQLMPIYYREPSMNLGLGSAFGRPPHLVTEAFLKYY
HCCCHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
GITPGTPLAHAFTAINYTEAAQRFGKVGGFAHLKTLVDRMRGDFGADKTLLLDGGDTWQG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
SGTAFWSRGMDMVEACNLLGVDVMTGHWEFTYLEDEVLKNLAAFKGDFVAQNIKVKEEAL
CCCHHHHCCCHHHHHHHHHCCEEEECCEEEEEEHHHHHHHHHHHCCCHHHCCCCHHHHHH
FSGAKAFDENTGHAFRPYVVKTLGKHRVAVIGQAFPYTPIANPARFIPDWTFGINARDMQ
HHCHHHHCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCCCCCCCCHHHHH
ELVDSVRAKEKPDAVVLISHNGMDVDIKLAEVVSGIDVIFGGHTHDGVPQPFIVKNARGR
HHHHHHHCCCCCCEEEEEECCCCEEEEEHHHHHCCCCEEECCCCCCCCCCCEEEECCCCC
TLVTNAGSNGKFLGVIDLKLGDGGVKEFKYKLLPVFANELPAHQGMQSLIDKIRAPYLDK
EEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHH
LREPLATAGSLLYRRGNFDGPFDQIICDALRQRNDAQISLSPGFRWGTTILPGQTITMEH
HHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEECCCCEEEHHH
VLDQTCMTYPETYVRDMTGQQIKDILEDVADNLFNRDPFYQQGGDMVRTGGLDYRIDPTA
HHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHCCCCEEEECCCCEEECCCH
TMGKRIDNMRLENGTPVEASKNYRVAGWATVGAKSPGEPVWDTVVAYLKDKKVVEVTKLH
HHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCC
TPELKNVGSNPGIDRS
CCHHHCCCCCCCCCCC
>Mature Secondary Structure
MFRDEPFEADSRRVKVTRGFTNVYGNSNRHLFMNLSRREFLRILGFAGAAGMLPNLASAT
CCCCCCCCCCCCEEEEEECCHHHCCCCCCEEEEECCHHHHHHHHHHCCHHHCCCCHHHHH
KASSDLYDFGRFGDIRLMHITDTHAQLMPIYYREPSMNLGLGSAFGRPPHLVTEAFLKYY
HCCCHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
GITPGTPLAHAFTAINYTEAAQRFGKVGGFAHLKTLVDRMRGDFGADKTLLLDGGDTWQG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
SGTAFWSRGMDMVEACNLLGVDVMTGHWEFTYLEDEVLKNLAAFKGDFVAQNIKVKEEAL
CCCHHHHCCCHHHHHHHHHCCEEEECCEEEEEEHHHHHHHHHHHCCCHHHCCCCHHHHHH
FSGAKAFDENTGHAFRPYVVKTLGKHRVAVIGQAFPYTPIANPARFIPDWTFGINARDMQ
HHCHHHHCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCCCCCCCCHHHHH
ELVDSVRAKEKPDAVVLISHNGMDVDIKLAEVVSGIDVIFGGHTHDGVPQPFIVKNARGR
HHHHHHHCCCCCCEEEEEECCCCEEEEEHHHHHCCCCEEECCCCCCCCCCCEEEECCCCC
TLVTNAGSNGKFLGVIDLKLGDGGVKEFKYKLLPVFANELPAHQGMQSLIDKIRAPYLDK
EEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHH
LREPLATAGSLLYRRGNFDGPFDQIICDALRQRNDAQISLSPGFRWGTTILPGQTITMEH
HHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEECCCCEEEHHH
VLDQTCMTYPETYVRDMTGQQIKDILEDVADNLFNRDPFYQQGGDMVRTGGLDYRIDPTA
HHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHCCCCEEEECCCCEEECCCH
TMGKRIDNMRLENGTPVEASKNYRVAGWATVGAKSPGEPVWDTVVAYLKDKKVVEVTKLH
HHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCC
TPELKNVGSNPGIDRS
CCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]