| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is soxA
Identifier: 21673846
GI number: 21673846
Start: 960479
End: 961339
Strand: Direct
Name: soxA
Synonym: CT1019
Alternate gene names: NA
Gene position: 960479-961339 (Clockwise)
Preceding gene: 21673845
Following gene: 21673847
Centisome position: 44.57
GC content: 55.75
Gene sequence:
>861_bases ATGAAAAAAACAATTCAGCGGGGGCTGTTTACCGGTGCACTCGTTCTGATGACGGCCATGACGGCGAAGCCGGCTAACGC GGAGGTCAATTACCAGGCACTGGTCGATGCGGATGTCAAGGCGTTCCAGGGCTTTTTCCGCAAGGAGTTTCCCGATGTGA AGCTTGAAGATTTCGGAAACGGCGTCTATGCGCTTGACGAAGATGCCCGCAAGCAGTGGAAGGAGATGGAGGAGTTTCCT CCCTATGAACTCGATGTCGAGGCGGGCAAGGCGCTCTTCAACAAACCCTTCGCCAATGGCAAATCGCTGGCGAGTTGTTT TCCGAACGGGGGAGCCGTGCGCGGCATGTATCCCTACTTCGACGAGAAGCGCAAAGAGGTGGTAACGCTCGAAATGGCGA TCAACGAATGCCGGGTCGCTAATGGCGAGAAGCCTTATGCGTGGGAAAAAGGGGACATTGCAAGGGTTTCCGCCTACATC GCTTCGATAAGCCGCGGTCAGAAGGTTGACGTCAAGGTCAAGAGCAAGGCGGCTTACGATGCCTACATGAAGGGCAAGAA GTTTTTCTACGCCAAGCGCGGTCAGCTCAACATGTCGTGCTCGGGCTGCCACATGGAGTATGCCGGGCGCCATCTGAGGG CGGAAATCATCAGCCCGGCACTTGGACACACCACCCACTTCCCGGTGTTCCGCTCCAAGTGGGGCGAAATCGGCACGCTG CACAGACGCTATGCCGGCTGCAGCAACAACATTGGCGCCAAGCCGTTTGCTCCCCAGAGCGAAGAGTATCGCGATCTGGA ATTTTTCCAGACAGTCATGTCAAACGGCCTGAAGTACAATGGCCCGGCATCAAGAAAATAA
Upstream 100 bases:
>100_bases GACATGCTCAAGGTCTCCTGGGTTGACAATAAAGGCGCTTCGGAAACTGCGGAGGCTGCCATTACGGCGATGTAATCCCC AATCACAGGAGAACCCATCC
Downstream 100 bases:
>100_bases GAAGGAGAAACCATGAAAAAAGTGTTATCGCTCTTGAGTATGCTGGTGCTCACGCCTTCTGCTTCGCTGCTGCTGGCTGA GCCAGCGCCTGCAGCCCCGG
Product: sulfur oxidation protein SoxA
Products: NA
Alternate protein names: Diheme Cytochrome C; Diheme Cytochrome C SoxA; Sulfur Oxidation Protein SoxA; Sulfur Oxidation Protein; Cytochrome C; Diheme Cytochrome C Sulfur Oxidising Protein SoxA; Sulfur Oxidation Protein SoxXA Diheme Cytochrome C Subunit; Secreted Protein-Like Protein; Chain G Soxax Complex; Sulfur Oxidation Diheme Cytochrome SoxA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MKKTIQRGLFTGALVLMTAMTAKPANAEVNYQALVDADVKAFQGFFRKEFPDVKLEDFGNGVYALDEDARKQWKEMEEFP PYELDVEAGKALFNKPFANGKSLASCFPNGGAVRGMYPYFDEKRKEVVTLEMAINECRVANGEKPYAWEKGDIARVSAYI ASISRGQKVDVKVKSKAAYDAYMKGKKFFYAKRGQLNMSCSGCHMEYAGRHLRAEIISPALGHTTHFPVFRSKWGEIGTL HRRYAGCSNNIGAKPFAPQSEEYRDLEFFQTVMSNGLKYNGPASRK
Sequences:
>Translated_286_residues MKKTIQRGLFTGALVLMTAMTAKPANAEVNYQALVDADVKAFQGFFRKEFPDVKLEDFGNGVYALDEDARKQWKEMEEFP PYELDVEAGKALFNKPFANGKSLASCFPNGGAVRGMYPYFDEKRKEVVTLEMAINECRVANGEKPYAWEKGDIARVSAYI ASISRGQKVDVKVKSKAAYDAYMKGKKFFYAKRGQLNMSCSGCHMEYAGRHLRAEIISPALGHTTHFPVFRSKWGEIGTL HRRYAGCSNNIGAKPFAPQSEEYRDLEFFQTVMSNGLKYNGPASRK >Mature_286_residues MKKTIQRGLFTGALVLMTAMTAKPANAEVNYQALVDADVKAFQGFFRKEFPDVKLEDFGNGVYALDEDARKQWKEMEEFP PYELDVEAGKALFNKPFANGKSLASCFPNGGAVRGMYPYFDEKRKEVVTLEMAINECRVANGEKPYAWEKGDIARVSAYI ASISRGQKVDVKVKSKAAYDAYMKGKKFFYAKRGQLNMSCSGCHMEYAGRHLRAEIISPALGHTTHFPVFRSKWGEIGTL HRRYAGCSNNIGAKPFAPQSEEYRDLEFFQTVMSNGLKYNGPASRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32134; Mature: 32134
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTIQRGLFTGALVLMTAMTAKPANAEVNYQALVDADVKAFQGFFRKEFPDVKLEDFGN CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCHHHCCC GVYALDEDARKQWKEMEEFPPYELDVEAGKALFNKPFANGKSLASCFPNGGAVRGMYPYF CEEEECHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCHHHHHCCCCCEECCCCCCH DEKRKEVVTLEMAINECRVANGEKPYAWEKGDIARVSAYIASISRGQKVDVKVKSKAAYD HHHHHHEEHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHH AYMKGKKFFYAKRGQLNMSCSGCHMEYAGRHLRAEIISPALGHTTHFPVFRSKWGEIGTL HHHCCCEEEEEECCCEECCCCCCCHHHHCHHHHHHHHCCHHCCCCCCCHHHHCCCCHHHH HRRYAGCSNNIGAKPFAPQSEEYRDLEFFQTVMSNGLKYNGPASRK HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCC >Mature Secondary Structure MKKTIQRGLFTGALVLMTAMTAKPANAEVNYQALVDADVKAFQGFFRKEFPDVKLEDFGN CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCHHHCCC GVYALDEDARKQWKEMEEFPPYELDVEAGKALFNKPFANGKSLASCFPNGGAVRGMYPYF CEEEECHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCHHHHHCCCCCEECCCCCCH DEKRKEVVTLEMAINECRVANGEKPYAWEKGDIARVSAYIASISRGQKVDVKVKSKAAYD HHHHHHEEHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHH AYMKGKKFFYAKRGQLNMSCSGCHMEYAGRHLRAEIISPALGHTTHFPVFRSKWGEIGTL HHHCCCEEEEEECCCEECCCCCCCHHHHCHHHHHHHHCCHHCCCCCCCHHHHCCCCHHHH HRRYAGCSNNIGAKPFAPQSEEYRDLEFFQTVMSNGLKYNGPASRK HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA