Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is soxA

Identifier: 21673846

GI number: 21673846

Start: 960479

End: 961339

Strand: Direct

Name: soxA

Synonym: CT1019

Alternate gene names: NA

Gene position: 960479-961339 (Clockwise)

Preceding gene: 21673845

Following gene: 21673847

Centisome position: 44.57

GC content: 55.75

Gene sequence:

>861_bases
ATGAAAAAAACAATTCAGCGGGGGCTGTTTACCGGTGCACTCGTTCTGATGACGGCCATGACGGCGAAGCCGGCTAACGC
GGAGGTCAATTACCAGGCACTGGTCGATGCGGATGTCAAGGCGTTCCAGGGCTTTTTCCGCAAGGAGTTTCCCGATGTGA
AGCTTGAAGATTTCGGAAACGGCGTCTATGCGCTTGACGAAGATGCCCGCAAGCAGTGGAAGGAGATGGAGGAGTTTCCT
CCCTATGAACTCGATGTCGAGGCGGGCAAGGCGCTCTTCAACAAACCCTTCGCCAATGGCAAATCGCTGGCGAGTTGTTT
TCCGAACGGGGGAGCCGTGCGCGGCATGTATCCCTACTTCGACGAGAAGCGCAAAGAGGTGGTAACGCTCGAAATGGCGA
TCAACGAATGCCGGGTCGCTAATGGCGAGAAGCCTTATGCGTGGGAAAAAGGGGACATTGCAAGGGTTTCCGCCTACATC
GCTTCGATAAGCCGCGGTCAGAAGGTTGACGTCAAGGTCAAGAGCAAGGCGGCTTACGATGCCTACATGAAGGGCAAGAA
GTTTTTCTACGCCAAGCGCGGTCAGCTCAACATGTCGTGCTCGGGCTGCCACATGGAGTATGCCGGGCGCCATCTGAGGG
CGGAAATCATCAGCCCGGCACTTGGACACACCACCCACTTCCCGGTGTTCCGCTCCAAGTGGGGCGAAATCGGCACGCTG
CACAGACGCTATGCCGGCTGCAGCAACAACATTGGCGCCAAGCCGTTTGCTCCCCAGAGCGAAGAGTATCGCGATCTGGA
ATTTTTCCAGACAGTCATGTCAAACGGCCTGAAGTACAATGGCCCGGCATCAAGAAAATAA

Upstream 100 bases:

>100_bases
GACATGCTCAAGGTCTCCTGGGTTGACAATAAAGGCGCTTCGGAAACTGCGGAGGCTGCCATTACGGCGATGTAATCCCC
AATCACAGGAGAACCCATCC

Downstream 100 bases:

>100_bases
GAAGGAGAAACCATGAAAAAAGTGTTATCGCTCTTGAGTATGCTGGTGCTCACGCCTTCTGCTTCGCTGCTGCTGGCTGA
GCCAGCGCCTGCAGCCCCGG

Product: sulfur oxidation protein SoxA

Products: NA

Alternate protein names: Diheme Cytochrome C; Diheme Cytochrome C SoxA; Sulfur Oxidation Protein SoxA; Sulfur Oxidation Protein; Cytochrome C; Diheme Cytochrome C Sulfur Oxidising Protein SoxA; Sulfur Oxidation Protein SoxXA Diheme Cytochrome C Subunit; Secreted Protein-Like Protein; Chain G Soxax Complex; Sulfur Oxidation Diheme Cytochrome SoxA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKKTIQRGLFTGALVLMTAMTAKPANAEVNYQALVDADVKAFQGFFRKEFPDVKLEDFGNGVYALDEDARKQWKEMEEFP
PYELDVEAGKALFNKPFANGKSLASCFPNGGAVRGMYPYFDEKRKEVVTLEMAINECRVANGEKPYAWEKGDIARVSAYI
ASISRGQKVDVKVKSKAAYDAYMKGKKFFYAKRGQLNMSCSGCHMEYAGRHLRAEIISPALGHTTHFPVFRSKWGEIGTL
HRRYAGCSNNIGAKPFAPQSEEYRDLEFFQTVMSNGLKYNGPASRK

Sequences:

>Translated_286_residues
MKKTIQRGLFTGALVLMTAMTAKPANAEVNYQALVDADVKAFQGFFRKEFPDVKLEDFGNGVYALDEDARKQWKEMEEFP
PYELDVEAGKALFNKPFANGKSLASCFPNGGAVRGMYPYFDEKRKEVVTLEMAINECRVANGEKPYAWEKGDIARVSAYI
ASISRGQKVDVKVKSKAAYDAYMKGKKFFYAKRGQLNMSCSGCHMEYAGRHLRAEIISPALGHTTHFPVFRSKWGEIGTL
HRRYAGCSNNIGAKPFAPQSEEYRDLEFFQTVMSNGLKYNGPASRK
>Mature_286_residues
MKKTIQRGLFTGALVLMTAMTAKPANAEVNYQALVDADVKAFQGFFRKEFPDVKLEDFGNGVYALDEDARKQWKEMEEFP
PYELDVEAGKALFNKPFANGKSLASCFPNGGAVRGMYPYFDEKRKEVVTLEMAINECRVANGEKPYAWEKGDIARVSAYI
ASISRGQKVDVKVKSKAAYDAYMKGKKFFYAKRGQLNMSCSGCHMEYAGRHLRAEIISPALGHTTHFPVFRSKWGEIGTL
HRRYAGCSNNIGAKPFAPQSEEYRDLEFFQTVMSNGLKYNGPASRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32134; Mature: 32134

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTIQRGLFTGALVLMTAMTAKPANAEVNYQALVDADVKAFQGFFRKEFPDVKLEDFGN
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCHHHCCC
GVYALDEDARKQWKEMEEFPPYELDVEAGKALFNKPFANGKSLASCFPNGGAVRGMYPYF
CEEEECHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCHHHHHCCCCCEECCCCCCH
DEKRKEVVTLEMAINECRVANGEKPYAWEKGDIARVSAYIASISRGQKVDVKVKSKAAYD
HHHHHHEEHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHH
AYMKGKKFFYAKRGQLNMSCSGCHMEYAGRHLRAEIISPALGHTTHFPVFRSKWGEIGTL
HHHCCCEEEEEECCCEECCCCCCCHHHHCHHHHHHHHCCHHCCCCCCCHHHHCCCCHHHH
HRRYAGCSNNIGAKPFAPQSEEYRDLEFFQTVMSNGLKYNGPASRK
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCC
>Mature Secondary Structure
MKKTIQRGLFTGALVLMTAMTAKPANAEVNYQALVDADVKAFQGFFRKEFPDVKLEDFGN
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCHHHCCC
GVYALDEDARKQWKEMEEFPPYELDVEAGKALFNKPFANGKSLASCFPNGGAVRGMYPYF
CEEEECHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCHHHHHCCCCCEECCCCCCH
DEKRKEVVTLEMAINECRVANGEKPYAWEKGDIARVSAYIASISRGQKVDVKVKSKAAYD
HHHHHHEEHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHH
AYMKGKKFFYAKRGQLNMSCSGCHMEYAGRHLRAEIISPALGHTTHFPVFRSKWGEIGTL
HHHCCCEEEEEECCCEECCCCCCCHHHHCHHHHHHHHCCHHCCCCCCCHHHHCCCCHHHH
HRRYAGCSNNIGAKPFAPQSEEYRDLEFFQTVMSNGLKYNGPASRK
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA