Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21673835

Identifier: 21673835

GI number: 21673835

Start: 952420

End: 952896

Strand: Direct

Name: 21673835

Synonym: CT1007

Alternate gene names: NA

Gene position: 952420-952896 (Clockwise)

Preceding gene: 21673834

Following gene: 21673837

Centisome position: 44.2

GC content: 58.49

Gene sequence:

>477_bases
ATGTTACTGTTCAGAAAATCGTTCACCATTCTTGCATTTGCGTTGACCGCCATCTTTTCGTTTGGCGCGACGCTCAATGC
CGCTTCTCCGGAACCTCAGGCCGCAGCCGTTCAGCCCGCCACCAAAGGCTTGTTCGTGGTGGTCACCTCCGATGACCCCA
TGACGCAGATGATGGCGATGGTGCTTTCGACCCAGACGCTCACCCAGGGCCGTTCCGTCCGCGTACTGGTTTGCGGCAAG
GCTGGTGAGCTTGTGCTGAAAGGCAGCAAGGAGAAGCTTTTCAAGCCGCTCGACAAGTCACCCCAGATGATGCTCAAAGG
GCTGATCGCCAAGGGCGTTACGGTCGAAATTTGCCCGCTTTACCTGCCTGATGCAGGCAAGCAGCCTTCGGCTCTCATCG
CGGGCGTCACGATCGCCAAGCCGCCGGTCGTCGCCGCCGCAATGGCTGAAGATGGCATCAAGCTGCTGACGTTCTGA

Upstream 100 bases:

>100_bases
TGAAATAATGGCCTCGTCATGACGAGCTTGCGTGGGAGCTGATGTTTTTGTAGTATATTAAGACCGTTAATTCACTTAAA
CATGAAAAGGCGAGCAACTT

Downstream 100 bases:

>100_bases
TCCGTCCGAATCTGTTTTGCAGAGCGCTGCCGCCGATCCGGTTTCCGGTAATTGGCGGCAGCGCTTTCTCATTTTCTGGC
GAACAGTTCCGGCAGCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MLLFRKSFTILAFALTAIFSFGATLNAASPEPQAAAVQPATKGLFVVVTSDDPMTQMMAMVLSTQTLTQGRSVRVLVCGK
AGELVLKGSKEKLFKPLDKSPQMMLKGLIAKGVTVEICPLYLPDAGKQPSALIAGVTIAKPPVVAAAMAEDGIKLLTF

Sequences:

>Translated_158_residues
MLLFRKSFTILAFALTAIFSFGATLNAASPEPQAAAVQPATKGLFVVVTSDDPMTQMMAMVLSTQTLTQGRSVRVLVCGK
AGELVLKGSKEKLFKPLDKSPQMMLKGLIAKGVTVEICPLYLPDAGKQPSALIAGVTIAKPPVVAAAMAEDGIKLLTF
>Mature_158_residues
MLLFRKSFTILAFALTAIFSFGATLNAASPEPQAAAVQPATKGLFVVVTSDDPMTQMMAMVLSTQTLTQGRSVRVLVCGK
AGELVLKGSKEKLFKPLDKSPQMMLKGLIAKGVTVEICPLYLPDAGKQPSALIAGVTIAKPPVVAAAMAEDGIKLLTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16610; Mature: 16610

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLFRKSFTILAFALTAIFSFGATLNAASPEPQAAAVQPATKGLFVVVTSDDPMTQMMAM
CEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCEEEEEECCCCHHHHHHH
VLSTQTLTQGRSVRVLVCGKAGELVLKGSKEKLFKPLDKSPQMMLKGLIAKGVTVEICPL
HHHHHHHCCCCCEEEEEECCCCCEEEECCHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEE
YLPDAGKQPSALIAGVTIAKPPVVAAAMAEDGIKLLTF
ECCCCCCCCCEEEEEEEECCCCEEEEEHHCCCEEEEEC
>Mature Secondary Structure
MLLFRKSFTILAFALTAIFSFGATLNAASPEPQAAAVQPATKGLFVVVTSDDPMTQMMAM
CEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCEEEEEECCCCHHHHHHH
VLSTQTLTQGRSVRVLVCGKAGELVLKGSKEKLFKPLDKSPQMMLKGLIAKGVTVEICPL
HHHHHHHCCCCCEEEEEECCCCCEEEECCHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEE
YLPDAGKQPSALIAGVTIAKPPVVAAAMAEDGIKLLTF
ECCCCCCCCCEEEEEEEECCCCEEEEEHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA