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The map label for this gene is aam1 [H]

Identifier: 21673805

GI number: 21673805

Start: 923410

End: 925218

Strand: Reverse

Name: aam1 [H]

Synonym: CT0977

Alternate gene names: 21673805

Gene position: 925218-923410 (Counterclockwise)

Preceding gene: 21673812

Following gene: 21673804

Centisome position: 42.93

GC content: 58.54

Gene sequence:

>1809_bases
ATGGTCGATCCTTTCGACTATTTCATCGACACGATCAGCACGATCAAGGCATCGGCTACGGTCATGCCGGACACAACGGA
GATGAGCGGCCAGAACTGGAGCGCATCGGCAACCGTGTACAACCTCTTCGTGAGGTACAACGCGGCCTTCGATCATGATC
GTGACGGGCACATCCGCACGGAGCCGCTTCCATGCGGATTTCGCGAGACCGGAACGCTGCTCAAGGCCATCGCCATGCTG
CCCTATATTAAGCGAATGGGCGTCAACACACTCTACCTGCTGCCGCTGACCAGCATCGGTAAAATCAACCGGAAAGGAGA
ACTCGGTTCTCCGTATGCGATCAAAAATCCATATGAGCTCGACGAAACGCTCGGCGAACCGGTGCTCGATCTGCCGCTGG
AGATGCAGCTCAAAGCACTCGTCGAGGCGGCGCATCACCTTGGGATGCGGGTCGTGTTCGAGTTTGTCTTCCGCACGGCC
TCCATTGACAGTGACTGGATCGGCGAGCATCCGGAGTGGTTCTACTGGCTCCGCAAGGAGGGCAACCTGGCGAGCTACGG
TCCACCACATTTCGATCACGACACCCTCGCGAGAATCTATGAACAGGTGGACAAGCACGACTTCCACGAGCTGCCGGAAC
CGGACGAGGCGTATCGCAGCCGCTTCGCGCCAACGCCAGAAAAGATCACGCTTGGCGCGAACGGCTACATCGGCACGACA
GCCGACGGCGGCAAGTGCGTCATCGCGAGCGCCTTCTCGGACTGGCCGCCGGACGACCGCCAGCCGCCATGGACCGACGT
CACCTATTTGAAGCTGCACGATTCACCGCGCTTTAACTACATCGCGTACAACACGATACGGATGTACGACGAAGCGCTCG
AACAGCCCGAGTTCCGCGCAATGAAGCTCTGGCGGGAGATTGCAGGCATCATTCCGCACTACCGCAAAGAGTTCGGCATC
GACGGCGCGATGATCGACATGGGCCATGCCCTGCCGCCGGAACTGAAGGCATCCATCGTGGCTGAAGCTCGCAAAGATGC
GCCAGAGTTTGCCTTCTGGGATGAAAACTTCGACCCGTCGCCGAAGCTGAAGGAGGAGGGGTTCAACGCCGTGTTCGGCT
CGCTGCCGTTCGTCATTCACGACGTACAGTACATCAAGGGGCTGCTGAATTTCCTGAACCGCAACGGCGTGGCGATCCCG
TTTTTCGCTACTGGCGAAAATCACAATACGCCGCGTGTGTGCCATACTCTTGCCGGACGTGAAGCTGGACGCCGCCGAGC
ACTCTTCCTCTTTACACTCGGTGCGGTGCTTCCGGCCATGCCGTTCATCCACTCCGGCATGGAAATTTGCGAGTGGCATC
CGGTTAACCTCGGCCTGAACTTCACCGACGATGACCGGCAGCGCTTCCCCGCCGAAACACTGCCGCTCTTCGCGCCCGCC
GCCTGCGATTGGGAGAACACCAACGGACTCGAACCGATCTGCGACGACATCCGCAAAGTACTCGACATCCGAAGCCGCCA
CTTCGACCTGATCCGATGCGGCGACATCGGCTCGATCGTCCAGCCCTACATCTCCGATCCGGCACTTTTAACCGTCATGC
GCAAATCGGGTGGCAGAAATCTGCTATTCGCTGGCAACAGCAACTTCGAAGAGCCAGTCACCGGTACAATGGAGTTCGGG
CAAAAGAAGATGGAGCTCGATGAGCTGATTTCCGGGCGAACGCTGATGGTTTCCGATCACAAGCTGATGCTCGATTTCGC
GCCAGGCCAGTGTGTACTGTTCGAAATTCCGAGCGCGGACGAAGAGTAA

Upstream 100 bases:

>100_bases
CGACAATCTCCTCGAATCGCTGGAATCGGCCAGGCGCCGCCAGCCCGCTGAACCATACGCTGTGCCGAACCTCTGGCGCG
AAGGAGGTACTGGCGTTTCG

Downstream 100 bases:

>100_bases
TTCCGACAGATTTTTTTCACTAAACCATTTAACTTATCATCATATCATGTCACTTCTTGTCATTGGATCCCTCGCTTTCG
ACGACATCGAAACTCCATTT

Product: alpha-amylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 602; Mature: 602

Protein sequence:

>602_residues
MVDPFDYFIDTISTIKASATVMPDTTEMSGQNWSASATVYNLFVRYNAAFDHDRDGHIRTEPLPCGFRETGTLLKAIAML
PYIKRMGVNTLYLLPLTSIGKINRKGELGSPYAIKNPYELDETLGEPVLDLPLEMQLKALVEAAHHLGMRVVFEFVFRTA
SIDSDWIGEHPEWFYWLRKEGNLASYGPPHFDHDTLARIYEQVDKHDFHELPEPDEAYRSRFAPTPEKITLGANGYIGTT
ADGGKCVIASAFSDWPPDDRQPPWTDVTYLKLHDSPRFNYIAYNTIRMYDEALEQPEFRAMKLWREIAGIIPHYRKEFGI
DGAMIDMGHALPPELKASIVAEARKDAPEFAFWDENFDPSPKLKEEGFNAVFGSLPFVIHDVQYIKGLLNFLNRNGVAIP
FFATGENHNTPRVCHTLAGREAGRRRALFLFTLGAVLPAMPFIHSGMEICEWHPVNLGLNFTDDDRQRFPAETLPLFAPA
ACDWENTNGLEPICDDIRKVLDIRSRHFDLIRCGDIGSIVQPYISDPALLTVMRKSGGRNLLFAGNSNFEEPVTGTMEFG
QKKMELDELISGRTLMVSDHKLMLDFAPGQCVLFEIPSADEE

Sequences:

>Translated_602_residues
MVDPFDYFIDTISTIKASATVMPDTTEMSGQNWSASATVYNLFVRYNAAFDHDRDGHIRTEPLPCGFRETGTLLKAIAML
PYIKRMGVNTLYLLPLTSIGKINRKGELGSPYAIKNPYELDETLGEPVLDLPLEMQLKALVEAAHHLGMRVVFEFVFRTA
SIDSDWIGEHPEWFYWLRKEGNLASYGPPHFDHDTLARIYEQVDKHDFHELPEPDEAYRSRFAPTPEKITLGANGYIGTT
ADGGKCVIASAFSDWPPDDRQPPWTDVTYLKLHDSPRFNYIAYNTIRMYDEALEQPEFRAMKLWREIAGIIPHYRKEFGI
DGAMIDMGHALPPELKASIVAEARKDAPEFAFWDENFDPSPKLKEEGFNAVFGSLPFVIHDVQYIKGLLNFLNRNGVAIP
FFATGENHNTPRVCHTLAGREAGRRRALFLFTLGAVLPAMPFIHSGMEICEWHPVNLGLNFTDDDRQRFPAETLPLFAPA
ACDWENTNGLEPICDDIRKVLDIRSRHFDLIRCGDIGSIVQPYISDPALLTVMRKSGGRNLLFAGNSNFEEPVTGTMEFG
QKKMELDELISGRTLMVSDHKLMLDFAPGQCVLFEIPSADEE
>Mature_602_residues
MVDPFDYFIDTISTIKASATVMPDTTEMSGQNWSASATVYNLFVRYNAAFDHDRDGHIRTEPLPCGFRETGTLLKAIAML
PYIKRMGVNTLYLLPLTSIGKINRKGELGSPYAIKNPYELDETLGEPVLDLPLEMQLKALVEAAHHLGMRVVFEFVFRTA
SIDSDWIGEHPEWFYWLRKEGNLASYGPPHFDHDTLARIYEQVDKHDFHELPEPDEAYRSRFAPTPEKITLGANGYIGTT
ADGGKCVIASAFSDWPPDDRQPPWTDVTYLKLHDSPRFNYIAYNTIRMYDEALEQPEFRAMKLWREIAGIIPHYRKEFGI
DGAMIDMGHALPPELKASIVAEARKDAPEFAFWDENFDPSPKLKEEGFNAVFGSLPFVIHDVQYIKGLLNFLNRNGVAIP
FFATGENHNTPRVCHTLAGREAGRRRALFLFTLGAVLPAMPFIHSGMEICEWHPVNLGLNFTDDDRQRFPAETLPLFAPA
ACDWENTNGLEPICDDIRKVLDIRSRHFDLIRCGDIGSIVQPYISDPALLTVMRKSGGRNLLFAGNSNFEEPVTGTMEFG
QKKMELDELISGRTLMVSDHKLMLDFAPGQCVLFEIPSADEE

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family. GlgE subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021828
- InterPro:   IPR006047
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF11896 DUF3416 [H]

EC number: NA

Molecular weight: Translated: 68036; Mature: 68036

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDPFDYFIDTISTIKASATVMPDTTEMSGQNWSASATVYNLFVRYNAAFDHDRDGHIRT
CCCHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCHHEEEEEEEEEECCCCCCCCCCEEC
EPLPCGFRETGTLLKAIAMLPYIKRMGVNTLYLLPLTSIGKINRKGELGSPYAIKNPYEL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCHH
DETLGEPVLDLPLEMQLKALVEAAHHLGMRVVFEFVFRTASIDSDWIGEHPEWFYWLRKE
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEC
GNLASYGPPHFDHDTLARIYEQVDKHDFHELPEPDEAYRSRFAPTPEKITLGANGYIGTT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCCCEEECC
ADGGKCVIASAFSDWPPDDRQPPWTDVTYLKLHDSPRFNYIAYNTIRMYDEALEQPEFRA
CCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHCCCHHHH
MKLWREIAGIIPHYRKEFGIDGAMIDMGHALPPELKASIVAEARKDAPEFAFWDENFDPS
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCC
PKLKEEGFNAVFGSLPFVIHDVQYIKGLLNFLNRNGVAIPFFATGENHNTPRVCHTLAGR
CCHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCC
EAGRRRALFLFTLGAVLPAMPFIHSGMEICEWHPVNLGLNFTDDDRQRFPAETLPLFAPA
CCCCCCEEHHHHHHHHHHHHHHHHCCCHHHEEEECEECCCCCCCHHHHCCHHHCCCCCCC
ACDWENTNGLEPICDDIRKVLDIRSRHFDLIRCGDIGSIVQPYISDPALLTVMRKSGGRN
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCHHHHHHHHCCCCE
LLFAGNSNFEEPVTGTMEFGQKKMELDELISGRTLMVSDHKLMLDFAPGQCVLFEIPSAD
EEEECCCCCCCCCCCHHHHCHHHHHHHHHHCCCEEEEECCEEEEEECCCCEEEEECCCCC
EE
CC
>Mature Secondary Structure
MVDPFDYFIDTISTIKASATVMPDTTEMSGQNWSASATVYNLFVRYNAAFDHDRDGHIRT
CCCHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCHHEEEEEEEEEECCCCCCCCCCEEC
EPLPCGFRETGTLLKAIAMLPYIKRMGVNTLYLLPLTSIGKINRKGELGSPYAIKNPYEL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCHH
DETLGEPVLDLPLEMQLKALVEAAHHLGMRVVFEFVFRTASIDSDWIGEHPEWFYWLRKE
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEC
GNLASYGPPHFDHDTLARIYEQVDKHDFHELPEPDEAYRSRFAPTPEKITLGANGYIGTT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCCCEEECC
ADGGKCVIASAFSDWPPDDRQPPWTDVTYLKLHDSPRFNYIAYNTIRMYDEALEQPEFRA
CCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHCCCHHHH
MKLWREIAGIIPHYRKEFGIDGAMIDMGHALPPELKASIVAEARKDAPEFAFWDENFDPS
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCC
PKLKEEGFNAVFGSLPFVIHDVQYIKGLLNFLNRNGVAIPFFATGENHNTPRVCHTLAGR
CCHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCC
EAGRRRALFLFTLGAVLPAMPFIHSGMEICEWHPVNLGLNFTDDDRQRFPAETLPLFAPA
CCCCCCEEHHHHHHHHHHHHHHHHCCCHHHEEEECEECCCCCCCHHHHCCHHHCCCCCCC
ACDWENTNGLEPICDDIRKVLDIRSRHFDLIRCGDIGSIVQPYISDPALLTVMRKSGGRN
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCHHHHHHHHCCCCE
LLFAGNSNFEEPVTGTMEFGQKKMELDELISGRTLMVSDHKLMLDFAPGQCVLFEIPSAD
EEEECCCCCCCCCCCHHHHCHHHHHHHHHHCCCEEEEECCEEEEEECCCCEEEEECCCCC
EE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10970853 [H]