| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is sglT [H]
Identifier: 21673803
GI number: 21673803
Start: 920544
End: 922304
Strand: Reverse
Name: sglT [H]
Synonym: CT0975
Alternate gene names: 21673803
Gene position: 922304-920544 (Counterclockwise)
Preceding gene: 21673804
Following gene: 21673802
Centisome position: 42.8
GC content: 60.82
Gene sequence:
>1761_bases ATGGCACAACTCACCCCTCTGGACATCTCATTCATTGCGGGGTACCTGCTGTTGACCCTGCTGGTCGGCCTGTTCTTTTC GCGACGGGCTTCTGAAAACGTCGGCGAGTTCTTCCTGTCAGGCCGCAAGCTGCCGTGGTGGATCGCTGGCACCGGCATGG TTGCCACGACGTTCGCTGCCGATACGCCGCTTGCCGTCGCCGGATTTGTGGCCAAGAACGGCATCGCGGGCAACTGGGTG TGGTGGACGTTCGTTTCGGGCGGAATGCTCACCGTCTTCTTCTTCGCCCGGCTCTGGCGGCGGGCAAACATTCTGACCGA CCTCGAATTCATCGAGCTGCGCTACAGCGGCAAGGCTGCGAGCTTTCTGCGCGGCTTCAAGGCGGTCTATTTTGGCCTCT TCATCAACGCGGTGATCATCGGGTGGGTAAACCTCGCCATGTTCAAGATCATCAAGATCATGATCCCCGGCCTCGACCCG CAGCTCACCATCGTGGGGCTGGTGATTTTCACGGCGATCTACTCCGGCATGTCGGGCCTCTGGGGCGTCTCAATCACCGA CGCCGTGCAGTTCGTCATCGCGATGGCTGGGTGCATCATCCTCGCCGTGCTGGCGGTCAACTCGCCGCAGGTCACGGCGG CTGGCGGCCTCAAACAGGCGCTGCCGGACTGGATGTTCGACTTTTTCCCCTCGTTCTCCTCAACCGTCAACACATCGGCG ACCGGAGCCTACGCCCTGCCCTTCACGGCCTTCGCGGCGATGGCGTTCGTGCAGTGGTGGGCGTCGTGGTATCCGGGCGC GGAGCCGGGCGGCGGCGGCTATATCGCCCAACGCATGATGAGCGCCAAGGACGAAAAAAACTCGCTGTTGGCGACGCTCT GGTTCACCATCGCGCACTATTGCGTTCGCCCGTGGCCGTGGATCGTGGTCGGTCTGGCGAGCCTCGTGATGTTCCCCAAT CTTCCCGCTGGGCAGAAAGAGGACGGCTTCGTGCATGTCATGAATGCCGTGCTACCCGCCGGCTTGAAAGGCCTGCTCAT CGCAGCCTTCATGGCAGCTTATATGTCCACCCTTTCGACCCATCTGAACTGGGGCACGAGCTACCTCATCAACGACCTCT ACAAGCGCTTCATCAAGCGGGAGGCTGAACAGAACCACTACGTCTTGATGTCGCGGATCGTCACTGCGGTGACGGCTATC TTCGCGCTTTACATCACGTTCTACGTGCTGGAGACCATCACCGGCGCGTGGGAGTTCATCATTCAGTGCGGCGCGGGCAC GGGCTTCGTGCTCATCATGCGCTGGTTCTGGTGGCGGCTCAACGCCTGGTCAGAGATCACTTCGATGGTCGCGCCGATCG TGGCCTACAGCTACATCAACCAGTTCACCACAATCGTCTTCCCCGAATCGATTTACATCATCGTCCTCTTCACGATTACC TGCACCCTTGCGGTCACCTGGCTCACCAAACCAACTGACCGCGAGAAGCTGCACGCCTTCTACCGCACCACCCGCGTTGG CGGCGCGCTCTGGAAACCGGTGGCCGACGAGATGCCCGACGTCAAGGGCGATACCGGTTTCCCCGCCCTCTTCGCCGACT GGTTTTTCGGCATCGTGCTGGTTTACGCCACACTGTTCGGCACCGGCAAGCTGATCTTCGGCGAACCGGTGGCCGCCGCG CTCTACTACGCCGCCGGCGCATTGGCAGGCGTGATGATCTACCGCGACCTGTCAAAGAGAAACTGGAAAACCTTCGATTG A
Upstream 100 bases:
>100_bases GGGGCATCCCGACAAGTCTCGATGCCCCTGCAGGTAACAACGCTATACTTCGTGGACAACCGCTGAAAAGACGCTCCGCC ACCAAACCCAACACACGCCC
Downstream 100 bases:
>100_bases CGATGACCTCACACCGCAAACTCATCCTCGCCTCGCAATCGCCGCGACGCCGGGAATTGCTCGCCATGACGGGAATTCCG TTCGAGACCGCCTCGGTCGA
Product: sodium:solute symporter family protein
Products: NA
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 586; Mature: 585
Protein sequence:
>586_residues MAQLTPLDISFIAGYLLLTLLVGLFFSRRASENVGEFFLSGRKLPWWIAGTGMVATTFAADTPLAVAGFVAKNGIAGNWV WWTFVSGGMLTVFFFARLWRRANILTDLEFIELRYSGKAASFLRGFKAVYFGLFINAVIIGWVNLAMFKIIKIMIPGLDP QLTIVGLVIFTAIYSGMSGLWGVSITDAVQFVIAMAGCIILAVLAVNSPQVTAAGGLKQALPDWMFDFFPSFSSTVNTSA TGAYALPFTAFAAMAFVQWWASWYPGAEPGGGGYIAQRMMSAKDEKNSLLATLWFTIAHYCVRPWPWIVVGLASLVMFPN LPAGQKEDGFVHVMNAVLPAGLKGLLIAAFMAAYMSTLSTHLNWGTSYLINDLYKRFIKREAEQNHYVLMSRIVTAVTAI FALYITFYVLETITGAWEFIIQCGAGTGFVLIMRWFWWRLNAWSEITSMVAPIVAYSYINQFTTIVFPESIYIIVLFTIT CTLAVTWLTKPTDREKLHAFYRTTRVGGALWKPVADEMPDVKGDTGFPALFADWFFGIVLVYATLFGTGKLIFGEPVAAA LYYAAGALAGVMIYRDLSKRNWKTFD
Sequences:
>Translated_586_residues MAQLTPLDISFIAGYLLLTLLVGLFFSRRASENVGEFFLSGRKLPWWIAGTGMVATTFAADTPLAVAGFVAKNGIAGNWV WWTFVSGGMLTVFFFARLWRRANILTDLEFIELRYSGKAASFLRGFKAVYFGLFINAVIIGWVNLAMFKIIKIMIPGLDP QLTIVGLVIFTAIYSGMSGLWGVSITDAVQFVIAMAGCIILAVLAVNSPQVTAAGGLKQALPDWMFDFFPSFSSTVNTSA TGAYALPFTAFAAMAFVQWWASWYPGAEPGGGGYIAQRMMSAKDEKNSLLATLWFTIAHYCVRPWPWIVVGLASLVMFPN LPAGQKEDGFVHVMNAVLPAGLKGLLIAAFMAAYMSTLSTHLNWGTSYLINDLYKRFIKREAEQNHYVLMSRIVTAVTAI FALYITFYVLETITGAWEFIIQCGAGTGFVLIMRWFWWRLNAWSEITSMVAPIVAYSYINQFTTIVFPESIYIIVLFTIT CTLAVTWLTKPTDREKLHAFYRTTRVGGALWKPVADEMPDVKGDTGFPALFADWFFGIVLVYATLFGTGKLIFGEPVAAA LYYAAGALAGVMIYRDLSKRNWKTFD >Mature_585_residues AQLTPLDISFIAGYLLLTLLVGLFFSRRASENVGEFFLSGRKLPWWIAGTGMVATTFAADTPLAVAGFVAKNGIAGNWVW WTFVSGGMLTVFFFARLWRRANILTDLEFIELRYSGKAASFLRGFKAVYFGLFINAVIIGWVNLAMFKIIKIMIPGLDPQ LTIVGLVIFTAIYSGMSGLWGVSITDAVQFVIAMAGCIILAVLAVNSPQVTAAGGLKQALPDWMFDFFPSFSSTVNTSAT GAYALPFTAFAAMAFVQWWASWYPGAEPGGGGYIAQRMMSAKDEKNSLLATLWFTIAHYCVRPWPWIVVGLASLVMFPNL PAGQKEDGFVHVMNAVLPAGLKGLLIAAFMAAYMSTLSTHLNWGTSYLINDLYKRFIKREAEQNHYVLMSRIVTAVTAIF ALYITFYVLETITGAWEFIIQCGAGTGFVLIMRWFWWRLNAWSEITSMVAPIVAYSYINQFTTIVFPESIYIIVLFTITC TLAVTWLTKPTDREKLHAFYRTTRVGGALWKPVADEMPDVKGDTGFPALFADWFFGIVLVYATLFGTGKLIFGEPVAAAL YYAAGALAGVMIYRDLSKRNWKTFD
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI14140236, Length=420, Percent_Identity=24.7619047619048, Blast_Score=90, Evalue=6e-18, Organism=Homo sapiens, GI109659836, Length=496, Percent_Identity=24.3951612903226, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI4507031, Length=428, Percent_Identity=23.1308411214953, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI17941285, Length=474, Percent_Identity=24.0506329113924, Blast_Score=80, Evalue=6e-15, Organism=Homo sapiens, GI109659839, Length=512, Percent_Identity=23.6328125, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI4507033, Length=435, Percent_Identity=22.9885057471264, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI110835708, Length=485, Percent_Identity=21.2371134020619, Blast_Score=67, Evalue=7e-11, Organism=Homo sapiens, GI206597483, Length=433, Percent_Identity=23.3256351039261, Blast_Score=66, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 64940; Mature: 64809
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQLTPLDISFIAGYLLLTLLVGLFFSRRASENVGEFFLSGRKLPWWIAGTGMVATTFAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEECCCHHHHHCCC DTPLAVAGFVAKNGIAGNWVWWTFVSGGMLTVFFFARLWRRANILTDLEFIELRYSGKAA CCCHHHHHHHHHCCCCCCCCEEEHHCCCHHHHHHHHHHHHHHHHHHCHHHHEEEECCCHH SFLRGFKAVYFGLFINAVIIGWVNLAMFKIIKIMIPGLDPQLTIVGLVIFTAIYSGMSGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC WGVSITDAVQFVIAMAGCIILAVLAVNSPQVTAAGGLKQALPDWMFDFFPSFSSTVNTSA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCC TGAYALPFTAFAAMAFVQWWASWYPGAEPGGGGYIAQRMMSAKDEKNSLLATLWFTIAHY CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH CVRPWPWIVVGLASLVMFPNLPAGQKEDGFVHVMNAVLPAGLKGLLIAAFMAAYMSTLST HHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH HLNWGTSYLINDLYKRFIKREAEQNHYVLMSRIVTAVTAIFALYITFYVLETITGAWEFI HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQCGAGTGFVLIMRWFWWRLNAWSEITSMVAPIVAYSYINQFTTIVFPESIYIIVLFTIT HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHH CTLAVTWLTKPTDREKLHAFYRTTRVGGALWKPVADEMPDVKGDTGFPALFADWFFGIVL HHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHH VYATLFGTGKLIFGEPVAAALYYAAGALAGVMIYRDLSKRNWKTFD HHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AQLTPLDISFIAGYLLLTLLVGLFFSRRASENVGEFFLSGRKLPWWIAGTGMVATTFAA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEECCCHHHHHCCC DTPLAVAGFVAKNGIAGNWVWWTFVSGGMLTVFFFARLWRRANILTDLEFIELRYSGKAA CCCHHHHHHHHHCCCCCCCCEEEHHCCCHHHHHHHHHHHHHHHHHHCHHHHEEEECCCHH SFLRGFKAVYFGLFINAVIIGWVNLAMFKIIKIMIPGLDPQLTIVGLVIFTAIYSGMSGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC WGVSITDAVQFVIAMAGCIILAVLAVNSPQVTAAGGLKQALPDWMFDFFPSFSSTVNTSA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCC TGAYALPFTAFAAMAFVQWWASWYPGAEPGGGGYIAQRMMSAKDEKNSLLATLWFTIAHY CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH CVRPWPWIVVGLASLVMFPNLPAGQKEDGFVHVMNAVLPAGLKGLLIAAFMAAYMSTLST HHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH HLNWGTSYLINDLYKRFIKREAEQNHYVLMSRIVTAVTAIFALYITFYVLETITGAWEFI HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQCGAGTGFVLIMRWFWWRLNAWSEITSMVAPIVAYSYINQFTTIVFPESIYIIVLFTIT HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHH CTLAVTWLTKPTDREKLHAFYRTTRVGGALWKPVADEMPDVKGDTGFPALFADWFFGIVL HHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHH VYATLFGTGKLIFGEPVAAALYYAAGALAGVMIYRDLSKRNWKTFD HHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]