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The map label for this gene is 21673782

Identifier: 21673782

GI number: 21673782

Start: 900737

End: 901081

Strand: Direct

Name: 21673782

Synonym: CT0954

Alternate gene names: NA

Gene position: 900737-901081 (Clockwise)

Preceding gene: 21673781

Following gene: 21673784

Centisome position: 41.8

GC content: 55.94

Gene sequence:

>345_bases
ATGGCATTGGTAAAGCCCACAGCCCTGCAATGGAAAAACCGCGACCCGGTTGACAACCTTCCCAATACGCCGCGCCGGCT
CAACAAGATCAAGCCTGCTCATCCGCAGACGAACGGCATGGTCGAGCGCTGTAACGGCCGGATAGAGGAGATTCCCAGGC
AGACCAGATTTGCCAGCGCCAACGAGCTTGCCACAACGATCGAGCACTGTGCAAAGCTCGCTGATGCCCGGACTCCGCAG
ACCATGTCAGGCCATCGTACACCGCTGGATACCTTGCGGGCATGGCGTAAAGGTTCGGATTTGTTTGTCCAAAACATCTA
TAATCTGGCGGAATCTGACACATAG

Upstream 100 bases:

>100_bases
GTCATGCTGGTTAAACTTCACCAGAACGGGCGGATAACACCGGCGATCCGTTGGGCAATTCAGAGCTCCAGCCTGTCGGT
AAGTCAGCTGGCGGCCAGGC

Downstream 100 bases:

>100_bases
TTTTTGTGGTTGTTGGAGCAAAATTTCAGTAACTTTACCGGGTACCCTCATCAATTACCGTTACCCCAGGTGGTTGTGTA
TTTCTTTATGCAGCATGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Catalytic Region; ISKpn8 Transposase; Integrase Catalytic Domain-Containing Protein

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MALVKPTALQWKNRDPVDNLPNTPRRLNKIKPAHPQTNGMVERCNGRIEEIPRQTRFASANELATTIEHCAKLADARTPQ
TMSGHRTPLDTLRAWRKGSDLFVQNIYNLAESDT

Sequences:

>Translated_114_residues
MALVKPTALQWKNRDPVDNLPNTPRRLNKIKPAHPQTNGMVERCNGRIEEIPRQTRFASANELATTIEHCAKLADARTPQ
TMSGHRTPLDTLRAWRKGSDLFVQNIYNLAESDT
>Mature_113_residues
ALVKPTALQWKNRDPVDNLPNTPRRLNKIKPAHPQTNGMVERCNGRIEEIPRQTRFASANELATTIEHCAKLADARTPQT
MSGHRTPLDTLRAWRKGSDLFVQNIYNLAESDT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12918; Mature: 12787

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALVKPTALQWKNRDPVDNLPNTPRRLNKIKPAHPQTNGMVERCNGRIEEIPRQTRFASA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCH
NELATTIEHCAKLADARTPQTMSGHRTPLDTLRAWRKGSDLFVQNIYNLAESDT
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ALVKPTALQWKNRDPVDNLPNTPRRLNKIKPAHPQTNGMVERCNGRIEEIPRQTRFASA
CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCH
NELATTIEHCAKLADARTPQTMSGHRTPLDTLRAWRKGSDLFVQNIYNLAESDT
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA