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The map label for this gene is yjcF [C]

Identifier: 21673746

GI number: 21673746

Start: 869365

End: 870513

Strand: Direct

Name: yjcF [C]

Synonym: CT0918

Alternate gene names: 21673746

Gene position: 869365-870513 (Clockwise)

Preceding gene: 21673745

Following gene: 21673747

Centisome position: 40.34

GC content: 62.14

Gene sequence:

>1149_bases
ATGCGCGAGAAGAATCCCTCGATGCCCACCGATCTTTCGGGTGCGGCTCTGAAAGGACGGCGGCTGCGCAAGATCGATTT
CAGCCAGACCAGCCTTGCCGGTGCCGACATGCGGCAGAGCGATTTTGGCCGATCCGAGTTTCGTGACGCCGACCTCTCCG
GCGCGAAGCTCGATGGCTCCGTGCTCGCCGGAAGCCGCTTCACCGGCGCGGACATGAATCAGGCTTCGCTTGCCGGGGCT
TTGTGCGCTGGTTCGGATTTCAGTGGAGCGAAGATGGCCTCGACCGTGCTGCGGCGCGCCGATTGCGGAGAAGCGAAGCT
GCGCGGTACTGATCTTTCCGGAGCCGATCTCCGGGAGGCGAATCTCGAACATGCCGATCTGAGTCGGGCCGATCTGCGCG
CGGCCAATCTCTGGCTGGCAAGAACCGGCGGTACGGACTTCACTGGCGCGCTGATTTCAGATGAGACCGTGCTGCCGAAC
GGCAAAACGGGGTCGGCGCAGTGGGCCAGCGAGCACGGGGCCATGTTCGCTCCTGTGGTGGCCGCCTCGAAGCCGGAGCC
AGCCGGAGTTGCCGGAGCAGCATTGCCTCAAGCCGTTCAGTCAGCCACGCCGTCTGCATCTTCGCAGGCGGTACCCTCTG
CCGCTCCGCAAAAAGCGACGACTCTTGCCAAAACCCTGAAACCCATCAGGGCATGGCGACCCGCACCATCCTCGATCAGC
TACGATGCCGACCAGCTCGACCAGCTCAAGTCCAACGTCACAAAGTGGAACCGCTTGAGAACCGAAAAACCGGCGATGAA
CGTCAGGCTGAAGGAGGCTCCGCTCGACAACCGGGTGCTTGCCTATGCCGACCTGCACGGTGCCGATCTTGAAAAAGCCT
CGCTGAAGCGTTCCGACCTCGAGAAGGCCGATCTGAAGAGCGCCAATCTCAGGGGCGCGGATCTGCGTTCGGCCAATCTT
CAGCGGGCCGATCTCCGTCAGGCCGATCTGCGAGGGGCGAACCTCTGGCTCGCCAATACCGGCAGGGCGGAGTTCGAAGG
TGCTATCGTTTCTTCCGAAACGGTGCTCGATACCGGTAAAAAAGCGACCCCGGCGTGGGCGCAAGAACATGCGGTGCGAT
TTATGGATGAATCGGAGCCGTTGAGATAA

Upstream 100 bases:

>100_bases
GTGCGCCGGTGTTTTGCTGTTCGGCGTAACTTCCCAAGCCATCGCTGCCGATGCCCGCCAGGAGGCTGTGGTGCAGCAGG
GCAGCGTCGAGTGGAACGCC

Downstream 100 bases:

>100_bases
TAGTGCACGAAAGGAGGTGTAACGCGTATGTCACGATCAAGCAATCCGCTGGTAACGGTCACCGTGCCGATGTACAACAA
CGAGCGATATATAGCCGAAA

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MREKNPSMPTDLSGAALKGRRLRKIDFSQTSLAGADMRQSDFGRSEFRDADLSGAKLDGSVLAGSRFTGADMNQASLAGA
LCAGSDFSGAKMASTVLRRADCGEAKLRGTDLSGADLREANLEHADLSRADLRAANLWLARTGGTDFTGALISDETVLPN
GKTGSAQWASEHGAMFAPVVAASKPEPAGVAGAALPQAVQSATPSASSQAVPSAAPQKATTLAKTLKPIRAWRPAPSSIS
YDADQLDQLKSNVTKWNRLRTEKPAMNVRLKEAPLDNRVLAYADLHGADLEKASLKRSDLEKADLKSANLRGADLRSANL
QRADLRQADLRGANLWLANTGRAEFEGAIVSSETVLDTGKKATPAWAQEHAVRFMDESEPLR

Sequences:

>Translated_382_residues
MREKNPSMPTDLSGAALKGRRLRKIDFSQTSLAGADMRQSDFGRSEFRDADLSGAKLDGSVLAGSRFTGADMNQASLAGA
LCAGSDFSGAKMASTVLRRADCGEAKLRGTDLSGADLREANLEHADLSRADLRAANLWLARTGGTDFTGALISDETVLPN
GKTGSAQWASEHGAMFAPVVAASKPEPAGVAGAALPQAVQSATPSASSQAVPSAAPQKATTLAKTLKPIRAWRPAPSSIS
YDADQLDQLKSNVTKWNRLRTEKPAMNVRLKEAPLDNRVLAYADLHGADLEKASLKRSDLEKADLKSANLRGADLRSANL
QRADLRQADLRGANLWLANTGRAEFEGAIVSSETVLDTGKKATPAWAQEHAVRFMDESEPLR
>Mature_382_residues
MREKNPSMPTDLSGAALKGRRLRKIDFSQTSLAGADMRQSDFGRSEFRDADLSGAKLDGSVLAGSRFTGADMNQASLAGA
LCAGSDFSGAKMASTVLRRADCGEAKLRGTDLSGADLREANLEHADLSRADLRAANLWLARTGGTDFTGALISDETVLPN
GKTGSAQWASEHGAMFAPVVAASKPEPAGVAGAALPQAVQSATPSASSQAVPSAAPQKATTLAKTLKPIRAWRPAPSSIS
YDADQLDQLKSNVTKWNRLRTEKPAMNVRLKEAPLDNRVLAYADLHGADLEKASLKRSDLEKADLKSANLRGADLRSANL
QRADLRQADLRGANLWLANTGRAEFEGAIVSSETVLDTGKKATPAWAQEHAVRFMDESEPLR

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=164, Percent_Identity=32.9268292682927, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 40537; Mature: 40537

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREKNPSMPTDLSGAALKGRRLRKIDFSQTSLAGADMRQSDFGRSEFRDADLSGAKLDGS
CCCCCCCCCCCCCCCHHCCCEEEEECCCHHHHCCCCCHHHCCCHHHHCCCCCCCCCCCCC
VLAGSRFTGADMNQASLAGALCAGSDFSGAKMASTVLRRADCGEAKLRGTDLSGADLREA
EEECCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCHHHC
NLEHADLSRADLRAANLWLARTGGTDFTGALISDETVLPNGKTGSAQWASEHGAMFAPVV
CCCHHCCCHHHHHEEEEEEEECCCCCCCCEEECCCEECCCCCCCCCHHHHHCCCEEEHHH
AASKPEPAGVAGAALPQAVQSATPSASSQAVPSAAPQKATTLAKTLKPIRAWRPAPSSIS
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
YDADQLDQLKSNVTKWNRLRTEKPAMNVRLKEAPLDNRVLAYADLHGADLEKASLKRSDL
CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHH
EKADLKSANLRGADLRSANLQRADLRQADLRGANLWLANTGRAEFEGAIVSSETVLDTGK
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCHHHCCCC
KATPAWAQEHAVRFMDESEPLR
CCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MREKNPSMPTDLSGAALKGRRLRKIDFSQTSLAGADMRQSDFGRSEFRDADLSGAKLDGS
CCCCCCCCCCCCCCCHHCCCEEEEECCCHHHHCCCCCHHHCCCHHHHCCCCCCCCCCCCC
VLAGSRFTGADMNQASLAGALCAGSDFSGAKMASTVLRRADCGEAKLRGTDLSGADLREA
EEECCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCHHHC
NLEHADLSRADLRAANLWLARTGGTDFTGALISDETVLPNGKTGSAQWASEHGAMFAPVV
CCCHHCCCHHHHHEEEEEEEECCCCCCCCEEECCCEECCCCCCCCCHHHHHCCCEEEHHH
AASKPEPAGVAGAALPQAVQSATPSASSQAVPSAAPQKATTLAKTLKPIRAWRPAPSSIS
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
YDADQLDQLKSNVTKWNRLRTEKPAMNVRLKEAPLDNRVLAYADLHGADLEKASLKRSDL
CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHH
EKADLKSANLRGADLRSANLQRADLRQADLRGANLWLANTGRAEFEGAIVSSETVLDTGK
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCHHHCCCC
KATPAWAQEHAVRFMDESEPLR
CCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA