| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673721
Identifier: 21673721
GI number: 21673721
Start: 845230
End: 846396
Strand: Direct
Name: 21673721
Synonym: CT0893
Alternate gene names: NA
Gene position: 845230-846396 (Clockwise)
Preceding gene: 21673720
Following gene: 21673722
Centisome position: 39.22
GC content: 53.98
Gene sequence:
>1167_bases GTGCGGTCTTCCATGTTCATGCAGTCTCGACACAACACAAAACAGCACAACACACAAAAGAGATCAATCATGAAAAAAAC TCTTTTTCTTTTAGGACTTGCAACCGCCATGGGTTTCAACAACGCTCAGGCCGTTGACTGGAACTGGAATGGCGATATCC GCTTCCGTTACGATTCAAGCAAGACGGAACTCGCATCTTCTCCAGATAAGCCGGCTGACGATCGCTATCGCCTTCGCGCA CGCTTTGGCGTCAGCCCGACCATCAACGATGAACTCTCTGCCGGCCTGCGCCTTGCAACCGGTGACGGCAAGAACCCAAC CTCCACCAACCAGACCCTCGGCAAAGATTTCGCCGACAAGGCTATCTGGCTCGACGAGGCATACATCAACTACCATCCGA AGGCTCTCGAGGGCAAAGTGAATGTGCTGCTCGGCAAGCGCGACATTGCCAAGACCTTCAACGTGGTGAAGGATCTGGTC TGGGACAGCGACGTTACGATTGAAGGTGCGACGTTGCAGTATGGCAAGGACGTGTCGGGCAAGCAGAAGAGCGGCCCGAG CCTCATCGCCGGTTACTATACCCTTGAGAATTATGCCACTGCTTCTGATCCATGTATTTTTGCCGTTCAGGGCGCCTACA TGGGTACTGTTTCGGGTGCTGATTTCAACCTCGGCGCCAGCTACTTCGATTATGTCCACATGAAGAATGTGGCTTGGTGG AATTCTCCAAATGGTCCTGCTAATGACGGCAAGGACTTCAGAATCCTCGAAGTTTTTGGCACCCTTGGCGGCAAGCTTGG CGGTTCGCTGCCTGCCACGCTGTACGCGCAGTACGCACACAACACGGCCCTCAACAGTGACAACAATGCTGTGCTCGCTG GCCTGAAGCTTGGCAGCGACAAAAAACCTGGCGGCTGGACGCTCGATGGCGGCTACTTCTACATCGAAAAGTACGCCGTT ACTCCGCTGACCGATGGCGACCGTCCGATGAGCAGCAAATACTCTACCGACATCAAAGGACTCAAGATCGGCGCCACCTA TCAGCTCGTTCAGAACATGACGCTTGGCGCGACCTACTTCCACGTCAATCCGGTCGATAGCAGCCTCACCGGTTCTACAA GCGATCACAAGAACCTGGTTCAGGCTGATGTTGCCGTGAACTTCTGA
Upstream 100 bases:
>100_bases TAAATAGTTATTCAGCAATTTAATTTAGCATCCTCTTTCCTGTTTTGTAACAATTTCTTAACAATTATAATCGTAAGTTT ATGCCCGAAAAAGGACGACC
Downstream 100 bases:
>100_bases TGCTGAACTGCTGTTCTTTTTGTGTGATGTTCTTTCTCCGTTGGGTGAGTGTGTGGTGCTCATCCGGATTGCTGCAAAGC CGCCCCGACTTGTCGAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MRSSMFMQSRHNTKQHNTQKRSIMKKTLFLLGLATAMGFNNAQAVDWNWNGDIRFRYDSSKTELASSPDKPADDRYRLRA RFGVSPTINDELSAGLRLATGDGKNPTSTNQTLGKDFADKAIWLDEAYINYHPKALEGKVNVLLGKRDIAKTFNVVKDLV WDSDVTIEGATLQYGKDVSGKQKSGPSLIAGYYTLENYATASDPCIFAVQGAYMGTVSGADFNLGASYFDYVHMKNVAWW NSPNGPANDGKDFRILEVFGTLGGKLGGSLPATLYAQYAHNTALNSDNNAVLAGLKLGSDKKPGGWTLDGGYFYIEKYAV TPLTDGDRPMSSKYSTDIKGLKIGATYQLVQNMTLGATYFHVNPVDSSLTGSTSDHKNLVQADVAVNF
Sequences:
>Translated_388_residues MRSSMFMQSRHNTKQHNTQKRSIMKKTLFLLGLATAMGFNNAQAVDWNWNGDIRFRYDSSKTELASSPDKPADDRYRLRA RFGVSPTINDELSAGLRLATGDGKNPTSTNQTLGKDFADKAIWLDEAYINYHPKALEGKVNVLLGKRDIAKTFNVVKDLV WDSDVTIEGATLQYGKDVSGKQKSGPSLIAGYYTLENYATASDPCIFAVQGAYMGTVSGADFNLGASYFDYVHMKNVAWW NSPNGPANDGKDFRILEVFGTLGGKLGGSLPATLYAQYAHNTALNSDNNAVLAGLKLGSDKKPGGWTLDGGYFYIEKYAV TPLTDGDRPMSSKYSTDIKGLKIGATYQLVQNMTLGATYFHVNPVDSSLTGSTSDHKNLVQADVAVNF >Mature_388_residues MRSSMFMQSRHNTKQHNTQKRSIMKKTLFLLGLATAMGFNNAQAVDWNWNGDIRFRYDSSKTELASSPDKPADDRYRLRA RFGVSPTINDELSAGLRLATGDGKNPTSTNQTLGKDFADKAIWLDEAYINYHPKALEGKVNVLLGKRDIAKTFNVVKDLV WDSDVTIEGATLQYGKDVSGKQKSGPSLIAGYYTLENYATASDPCIFAVQGAYMGTVSGADFNLGASYFDYVHMKNVAWW NSPNGPANDGKDFRILEVFGTLGGKLGGSLPATLYAQYAHNTALNSDNNAVLAGLKLGSDKKPGGWTLDGGYFYIEKYAV TPLTDGDRPMSSKYSTDIKGLKIGATYQLVQNMTLGATYFHVNPVDSSLTGSTSDHKNLVQADVAVNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42410; Mature: 42410
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSMFMQSRHNTKQHNTQKRSIMKKTLFLLGLATAMGFNNAQAVDWNWNGDIRFRYDSS CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCC KTELASSPDKPADDRYRLRARFGVSPTINDELSAGLRLATGDGKNPTSTNQTLGKDFADK CHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHCCEEEEECCCCCCCCCCHHHHHHHHCC AIWLDEAYINYHPKALEGKVNVLLGKRDIAKTFNVVKDLVWDSDVTIEGATLQYGKDVSG EEEEECHHEECCCCHHCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEECCEEECCCCCCC KQKSGPSLIAGYYTLENYATASDPCIFAVQGAYMGTVSGADFNLGASYFDYVHMKNVAWW CCCCCCCEEEEEEEECCCCCCCCCEEEEECCCEEEEECCCCCCCCCHHHHHEEECCEEEE NSPNGPANDGKDFRILEVFGTLGGKLGGSLPATLYAQYAHNTALNSDNNAVLAGLKLGSD CCCCCCCCCCCCEEEEEEEHHHCHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCC KKPGGWTLDGGYFYIEKYAVTPLTDGDRPMSSKYSTDIKGLKIGATYQLVQNMTLGATYF CCCCCEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECHHHHHHHCCEEEEEEE HVNPVDSSLTGSTSDHKNLVQADVAVNF EECCCCCCCCCCCCCCHHHEEEEEEECC >Mature Secondary Structure MRSSMFMQSRHNTKQHNTQKRSIMKKTLFLLGLATAMGFNNAQAVDWNWNGDIRFRYDSS CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCC KTELASSPDKPADDRYRLRARFGVSPTINDELSAGLRLATGDGKNPTSTNQTLGKDFADK CHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHCCEEEEECCCCCCCCCCHHHHHHHHCC AIWLDEAYINYHPKALEGKVNVLLGKRDIAKTFNVVKDLVWDSDVTIEGATLQYGKDVSG EEEEECHHEECCCCHHCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEECCEEECCCCCCC KQKSGPSLIAGYYTLENYATASDPCIFAVQGAYMGTVSGADFNLGASYFDYVHMKNVAWW CCCCCCCEEEEEEEECCCCCCCCCEEEEECCCEEEEECCCCCCCCCHHHHHEEECCEEEE NSPNGPANDGKDFRILEVFGTLGGKLGGSLPATLYAQYAHNTALNSDNNAVLAGLKLGSD CCCCCCCCCCCCEEEEEEEHHHCHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCC KKPGGWTLDGGYFYIEKYAVTPLTDGDRPMSSKYSTDIKGLKIGATYQLVQNMTLGATYF CCCCCEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECHHHHHHHCCEEEEEEE HVNPVDSSLTGSTSDHKNLVQADVAVNF EECCCCCCCCCCCCCCHHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA