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The map label for this gene is gph [H]

Identifier: 21673717

GI number: 21673717

Start: 842898

End: 843575

Strand: Reverse

Name: gph [H]

Synonym: CT0889

Alternate gene names: 21673717

Gene position: 843575-842898 (Counterclockwise)

Preceding gene: 21673718

Following gene: 21673715

Centisome position: 39.15

GC content: 62.54

Gene sequence:

>678_bases
ATGATGAATCATTCAGTTACCCAGAAATTCTCCGCCGTGGTGTTCGACATGGACGGCACGCTCCTCGACACGCTCGCGGA
CATCTCCTACAGCCTCAACTCGGTGCTCGAAGAGGAGGGCTACCCAACCCATCCGGTCGAAGCGTGCCGGGCGATGGTCG
GCTTCGGAATGCGTGAGCTGGTGCGCAAAGCGCTGCCGGAAAGCGCCCACGACGAAGCCATCACCGAGCCGCTGCTCAAA
AAGCTGCAGGCGCGATACGCCGAGCACTGGAACGACAGCTCCCGCCCCTACGACGGCGTCGTCGAACTGCTCGACGCCAT
CGACCGGCTGGGGCTGAAAAAGGCGATTCTCTCCAACAAACCCGACCGTTTCACCCGCCAGTGCGCCGAAGAGCTGCTCG
CGCCATGGAAATTCGACGTCATCATGGGTTTCCGCGAAGGCATCGCGCCGAAGCCCGATCCGACCGGCGCGCTGCTTGTT
GCTAAAGAACTTGGCGTCGAGCCAGCCTCGATCCTCTACGTTGGCGACAGCGGCGTGGACATGAAAACCGCCAACGCCGC
CGGAATGTACCCCCTCGGCGTTACCTGGGGCTACCGTCCCGGCGATGAATTGCTCGCCACCGGCGCAGCGAAGCTCGTTT
CACACCCCACCGAAATCATCCCGCTGCTCACCGCCTGA

Upstream 100 bases:

>100_bases
CTTCATGACTGCGCACATCATCGAAAAGAAAAACCGCGAGGGCAACCTGAAAAACTATCCGGTGTTCCTCGTCACCGCAG
TCAAACCAAAGGCTTAACAC

Downstream 100 bases:

>100_bases
GCATCTGACCGCTTAACCGTCGGAAAAAAAGAGAGTTGACACGTTTGTAACCTTTCCGGCGGGAACTATTCGCTAATTTC
GCCAGTACACAGTAAAACAA

Product: phosphoglycolate phosphatase

Products: NA

Alternate protein names: PGP 2; PGPase2 [H]

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MMNHSVTQKFSAVVFDMDGTLLDTLADISYSLNSVLEEEGYPTHPVEACRAMVGFGMRELVRKALPESAHDEAITEPLLK
KLQARYAEHWNDSSRPYDGVVELLDAIDRLGLKKAILSNKPDRFTRQCAEELLAPWKFDVIMGFREGIAPKPDPTGALLV
AKELGVEPASILYVGDSGVDMKTANAAGMYPLGVTWGYRPGDELLATGAAKLVSHPTEIIPLLTA

Sequences:

>Translated_225_residues
MMNHSVTQKFSAVVFDMDGTLLDTLADISYSLNSVLEEEGYPTHPVEACRAMVGFGMRELVRKALPESAHDEAITEPLLK
KLQARYAEHWNDSSRPYDGVVELLDAIDRLGLKKAILSNKPDRFTRQCAEELLAPWKFDVIMGFREGIAPKPDPTGALLV
AKELGVEPASILYVGDSGVDMKTANAAGMYPLGVTWGYRPGDELLATGAAKLVSHPTEIIPLLTA
>Mature_225_residues
MMNHSVTQKFSAVVFDMDGTLLDTLADISYSLNSVLEEEGYPTHPVEACRAMVGFGMRELVRKALPESAHDEAITEPLLK
KLQARYAEHWNDSSRPYDGVVELLDAIDRLGLKKAILSNKPDRFTRQCAEELLAPWKFDVIMGFREGIAPKPDPTGALLV
AKELGVEPASILYVGDSGVDMKTANAAGMYPLGVTWGYRPGDELLATGAAKLVSHPTEIIPLLTA

Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stres

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1789787, Length=235, Percent_Identity=26.8085106382979, Blast_Score=81, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR006346
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.1.3.18 [H]

Molecular weight: Translated: 24570; Mature: 24570

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNHSVTQKFSAVVFDMDGTLLDTLADISYSLNSVLEEEGYPTHPVEACRAMVGFGMREL
CCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHH
VRKALPESAHDEAITEPLLKKLQARYAEHWNDSSRPYDGVVELLDAIDRLGLKKAILSNK
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDRFTRQCAEELLAPWKFDVIMGFREGIAPKPDPTGALLVAKELGVEPASILYVGDSGVD
CHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEHHHHCCCCCEEEEECCCCCC
MKTANAAGMYPLGVTWGYRPGDELLATGAAKLVSHPTEIIPLLTA
EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCC
>Mature Secondary Structure
MMNHSVTQKFSAVVFDMDGTLLDTLADISYSLNSVLEEEGYPTHPVEACRAMVGFGMREL
CCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHH
VRKALPESAHDEAITEPLLKKLQARYAEHWNDSSRPYDGVVELLDAIDRLGLKKAILSNK
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDRFTRQCAEELLAPWKFDVIMGFREGIAPKPDPTGALLVAKELGVEPASILYVGDSGVD
CHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEHHHHCCCCCEEEEECCCCCC
MKTANAAGMYPLGVTWGYRPGDELLATGAAKLVSHPTEIIPLLTA
EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]