| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673713
Identifier: 21673713
GI number: 21673713
Start: 839530
End: 840216
Strand: Reverse
Name: 21673713
Synonym: CT0885
Alternate gene names: NA
Gene position: 840216-839530 (Counterclockwise)
Preceding gene: 21673714
Following gene: 21673712
Centisome position: 38.99
GC content: 58.22
Gene sequence:
>687_bases TTGACGACCCTCGAAGGCGCGCCCCGGATCACCGGCAGCTTCGACTGCTCCGGCAACGAAATCGTCTCGCTCGAAGGAGG ACCGGAAAAAGTCAACGGCGATTTCAACTGTTCGTCCAACCAGCTCTCGTGCCTGAAGGGCGGGCCATCGAAGGTGAAAG GAGATTTCCTCTGCTCCGGAAACCGCCTGATTTCGCTCCTGGGTGCGCCAAAAAAAGTAAAGGGGTACTTCGACTGCTCC GACAACCAGCTTGTTTCGCTCTATGGCGGCCCAATCGAAACCGGCGCATTCAACTGCTCCGGCAACCGCTTGCGCTCGCT CCTGGGCGCGCCTGACGAAGTCCATGCCGGTTTCGACTGCTCCTCGAACCTGCTCGTTTCGCTTGACGGTGCTCCGGAGT TCGTCAACGGCGACTTCTCCTGTGCAAACAACCTGCTGGAAAATCTCGCGCACGGGCCGGTTGAGGTCTCGGGCAACTTC AACTGCTCCGGCAACCGACTCATGAACCTCAAGCGCTTTCCAAAACGGGTCGAGGGTGAGCTTGACTGTTCCGGCAATCC GATACTCGCCTGTGATGTCACAGGGCCGGAATCGGACCGGAACTGCATCAGGGTCGTCCATGGCGGAACAGTACGCTGCT GCTGCCGGAAGACTGATAGCAGTCAACTCGAAGCATTGTCTTCATAA
Upstream 100 bases:
>100_bases CGATGGTACGGGCGATATCGATTGCTCGAACAGGGGACTGACCTCGCTTGAAGGGTGTCCTGAAATCGTCGAAGGCTCAT TCAACTGCTCCGGAAACCGG
Downstream 100 bases:
>100_bases CCGCTCAAAACCGAGAGCCTATGAGCGACACCCAGGGGTCTCTTTTTTTCCGAATCAACGGCCAAATGCCGCTGGTTCAG TCGGTCGGACAGAACCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTTLEGAPRITGSFDCSGNEIVSLEGGPEKVNGDFNCSSNQLSCLKGGPSKVKGDFLCSGNRLISLLGAPKKVKGYFDCS DNQLVSLYGGPIETGAFNCSGNRLRSLLGAPDEVHAGFDCSSNLLVSLDGAPEFVNGDFSCANNLLENLAHGPVEVSGNF NCSGNRLMNLKRFPKRVEGELDCSGNPILACDVTGPESDRNCIRVVHGGTVRCCCRKTDSSQLEALSS
Sequences:
>Translated_228_residues MTTLEGAPRITGSFDCSGNEIVSLEGGPEKVNGDFNCSSNQLSCLKGGPSKVKGDFLCSGNRLISLLGAPKKVKGYFDCS DNQLVSLYGGPIETGAFNCSGNRLRSLLGAPDEVHAGFDCSSNLLVSLDGAPEFVNGDFSCANNLLENLAHGPVEVSGNF NCSGNRLMNLKRFPKRVEGELDCSGNPILACDVTGPESDRNCIRVVHGGTVRCCCRKTDSSQLEALSS >Mature_227_residues TTLEGAPRITGSFDCSGNEIVSLEGGPEKVNGDFNCSSNQLSCLKGGPSKVKGDFLCSGNRLISLLGAPKKVKGYFDCSD NQLVSLYGGPIETGAFNCSGNRLRSLLGAPDEVHAGFDCSSNLLVSLDGAPEFVNGDFSCANNLLENLAHGPVEVSGNFN CSGNRLMNLKRFPKRVEGELDCSGNPILACDVTGPESDRNCIRVVHGGTVRCCCRKTDSSQLEALSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24020; Mature: 23889
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 6.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLEGAPRITGSFDCSGNEIVSLEGGPEKVNGDFNCSSNQLSCLKGGPSKVKGDFLCSG CCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECC NRLISLLGAPKKVKGYFDCSDNQLVSLYGGPIETGAFNCSGNRLRSLLGAPDEVHAGFDC CCEEEECCCCHHHCEEEECCCCEEEEEECCCCCCCEEECCHHHHHHHHCCCHHHCCCCCC SSNLLVSLDGAPEFVNGDFSCANNLLENLAHGPVEVSGNFNCSGNRLMNLKRFPKRVEGE CCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCEEECHHHCHHHCCCE LDCSGNPILACDVTGPESDRNCIRVVHGGTVRCCCRKTDSSQLEALSS ECCCCCCEEEEECCCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHCC >Mature Secondary Structure TTLEGAPRITGSFDCSGNEIVSLEGGPEKVNGDFNCSSNQLSCLKGGPSKVKGDFLCSG CCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECC NRLISLLGAPKKVKGYFDCSDNQLVSLYGGPIETGAFNCSGNRLRSLLGAPDEVHAGFDC CCEEEECCCCHHHCEEEECCCCEEEEEECCCCCCCEEECCHHHHHHHHCCCHHHCCCCCC SSNLLVSLDGAPEFVNGDFSCANNLLENLAHGPVEVSGNFNCSGNRLMNLKRFPKRVEGE CCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCEEECHHHCHHHCCCE LDCSGNPILACDVTGPESDRNCIRVVHGGTVRCCCRKTDSSQLEALSS ECCCCCCEEEEECCCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA