| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673701
Identifier: 21673701
GI number: 21673701
Start: 828588
End: 829358
Strand: Direct
Name: 21673701
Synonym: CT0872
Alternate gene names: NA
Gene position: 828588-829358 (Clockwise)
Preceding gene: 21673700
Following gene: 21673703
Centisome position: 38.45
GC content: 53.05
Gene sequence:
>771_bases ATGGAGAACATTCTCGACAAACTCGGCATAGAACTCAACGAACAGACTCGCCTCACCAATGACAGCAAATTCACCTTCAA CTGTCACAGCGGCCTGTCATGCTTCAACACCTGTTGCAGCAACCTCGACATTGTGCTCACCCCCTACGATATTCTGCGGA TGAAAAATCGCCTCGGCCTCACCTCGGTGGAGTTCATCTCGGAGTATACCGAACCGGTGATCCAGAAGGAGTCGAAGCTG CCCTTTCTGAAGCTCAAGCTTGGCGACGAGGGCAAGTGCCGTTTCGTCGCTGCTGAAGGCTGCACGGTCTATGGCGACCG CCCGGCGGCATGCCGCTACTACCCGCTCGGCTTCGGCATCTACAAGAACGAAGAGGCCGGAGACGACTTCTATTTTCTCA TCAGGGAAGATCACTGCAAGGGATTTGAAGAGGAGCGCGAATGGACAGTCGGCGAGTGGCGCAAGAATCAGGGCGTTGAC GAATATGACGACAAGAATCGCGTCTGGATGGAGGTGATCCTCAACAAAAAACTCTACAGCCCGGAACTCGAACCCGACGA GAAGAGCCTCAAGATGTTCTTCATGGCCAGCTACGACCTTGACGCTTTCAGGGATTTTGTTTTTGAGAGCCGCTTTCTCG ACGTGTTCGACATCGAAGAAGAGCGTCTTGAGATGATTAAAAACGACGAGGCCGAGTTGATGCTTTTCGCGCATCAGTGG CTCCTCTTCGCGCTCTTCAAAAAGCCGACGATGAACCTCAAGCAGGTTTGA
Upstream 100 bases:
>100_bases ATAACTCATCCAGAGAGTTTCTGCAACAGCATATGACTAACATTCCGCCGTTTTTTCCGGTTCCCGGACAGGAAAAGCGG CAGACCAAACCACCAAAATA
Downstream 100 bases:
>100_bases GTATCCTGCAACAGAAGTGTCGGTGTAAAAAAAGAGGCAGCCTTAGTTCATTGTATGCTCAACTGTTCGGATGAACTAAG AGGAAAACGGTTTTTTTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MENILDKLGIELNEQTRLTNDSKFTFNCHSGLSCFNTCCSNLDIVLTPYDILRMKNRLGLTSVEFISEYTEPVIQKESKL PFLKLKLGDEGKCRFVAAEGCTVYGDRPAACRYYPLGFGIYKNEEAGDDFYFLIREDHCKGFEEEREWTVGEWRKNQGVD EYDDKNRVWMEVILNKKLYSPELEPDEKSLKMFFMASYDLDAFRDFVFESRFLDVFDIEEERLEMIKNDEAELMLFAHQW LLFALFKKPTMNLKQV
Sequences:
>Translated_256_residues MENILDKLGIELNEQTRLTNDSKFTFNCHSGLSCFNTCCSNLDIVLTPYDILRMKNRLGLTSVEFISEYTEPVIQKESKL PFLKLKLGDEGKCRFVAAEGCTVYGDRPAACRYYPLGFGIYKNEEAGDDFYFLIREDHCKGFEEEREWTVGEWRKNQGVD EYDDKNRVWMEVILNKKLYSPELEPDEKSLKMFFMASYDLDAFRDFVFESRFLDVFDIEEERLEMIKNDEAELMLFAHQW LLFALFKKPTMNLKQV >Mature_256_residues MENILDKLGIELNEQTRLTNDSKFTFNCHSGLSCFNTCCSNLDIVLTPYDILRMKNRLGLTSVEFISEYTEPVIQKESKL PFLKLKLGDEGKCRFVAAEGCTVYGDRPAACRYYPLGFGIYKNEEAGDDFYFLIREDHCKGFEEEREWTVGEWRKNQGVD EYDDKNRVWMEVILNKKLYSPELEPDEKSLKMFFMASYDLDAFRDFVFESRFLDVFDIEEERLEMIKNDEAELMLFAHQW LLFALFKKPTMNLKQV
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30188; Mature: 30188
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENILDKLGIELNEQTRLTNDSKFTFNCHSGLSCFNTCCSNLDIVLTPYDILRMKNRLGL CCHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCEEEECCHHHHHHHHHCCC TSVEFISEYTEPVIQKESKLPFLKLKLGDEGKCRFVAAEGCTVYGDRPAACRYYPLGFGI HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCEEEECCCCCCEEEEECCCEE YKNEEAGDDFYFLIREDHCKGFEEEREWTVGEWRKNQGVDEYDDKNRVWMEVILNKKLYS ECCCCCCCCEEEEEECCCCCCCCHHCCCCCHHHHHCCCCCCCCCCCCEEHHHHHCCHHCC PELEPDEKSLKMFFMASYDLDAFRDFVFESRFLDVFDIEEERLEMIKNDEAELMLFAHQW CCCCCCHHHEEEEEEEECCHHHHHHHHHHHHCCEEECCCHHHHHHHHCCCHHEEHHHHHH LLFALFKKPTMNLKQV HHHHHHHCCCCCCCCC >Mature Secondary Structure MENILDKLGIELNEQTRLTNDSKFTFNCHSGLSCFNTCCSNLDIVLTPYDILRMKNRLGL CCHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCEEEECCHHHHHHHHHCCC TSVEFISEYTEPVIQKESKLPFLKLKLGDEGKCRFVAAEGCTVYGDRPAACRYYPLGFGI HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCEEEECCCCCCEEEEECCCEE YKNEEAGDDFYFLIREDHCKGFEEEREWTVGEWRKNQGVDEYDDKNRVWMEVILNKKLYS ECCCCCCCCEEEEEECCCCCCCCHHCCCCCHHHHHCCCCCCCCCCCCEEHHHHHCCHHCC PELEPDEKSLKMFFMASYDLDAFRDFVFESRFLDVFDIEEERLEMIKNDEAELMLFAHQW CCCCCCHHHEEEEEEEECCHHHHHHHHHHHHCCEEECCCHHHHHHHHCCCHHEEHHHHHH LLFALFKKPTMNLKQV HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA