| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is dsrA-1 [H]
Identifier: 21673681
GI number: 21673681
Start: 811280
End: 812530
Strand: Direct
Name: dsrA-1 [H]
Synonym: CT0852
Alternate gene names: 21673681
Gene position: 811280-812530 (Clockwise)
Preceding gene: 21673680
Following gene: 21673682
Centisome position: 37.65
GC content: 60.19
Gene sequence:
>1251_bases ATGAGTGCTAACGACAGCGCTGTGAACGAGTCGTGTCATTGCGGCGGATGCGGATCATCGGGCAACGGCAAGTTCCTGAA CGAAACGCCGATGCTCGACCAGCTTGAAAGCGGTCCGTGGCCCAGCTTCATTTCGGGCTTCAAGGCGCTTGCGGAGCGGA CAGAGAAACCGATGCTGCGGGGCGTGCTGGACCAGCTCGAATATTCTTACAAGACCAAGATGGGCTACTGGAAAGGCGGT CTGGTCACGGTAGACGGCTACGGCGCCGGTATCATCACGCGCTACTCGATGATCAAGGACAAATTTCCCGAAGCCGCCGA ATTCCACACGATGCGCATCCAGCCGGCCCCGGGCCTACATTACAACACCACGATGCTGCGCGAACTGTGCGACATCTGGG AGAAATACGGCAGCGGCATCATCACCTTGCACGGCCAGACCGGCGACATCATGCTGCAGGGCATCGAGCAGGACAAAGTC CAGGCGTGCTTCGACGAGCTCAACCAGAAAGGGTGGGACCTCGGCGGCGCCGGCGCCGGCATGCGAACCGGCGTCTCGTG CATCGGGCCAGGCCGCTGCGACAACGCCTGCTACGACAACCTCAAGCTGCACCTCGAAGCGCTCAAGCACTTCTCCCCGC AGGTGCACCGCCCCGAATGGAACTACAAGCTGAAATTCAAATTCTCCGGCTGCCCGAACGACTGTACCAACGCGATCATG CGCTCCGACCTGGCGGTCATCGGCACCTGGCGTGACTCGATCCAGATTGACCACGACGAAGTCAAGGCATGGATCGCCGA GAAGGGGGTGGATGCGCTGGTCAACAACGTCATCAACCGCTGCCCGACCAAAGCGATCCGCTTGCAAGACGGCGACATCG ACATCTCGACGCGCGACTGCGTTCGCTGCATGCACTGCATCAACGCCATGTCCAAAGCGCTCTCGCCGGGCAAGGACAAG GGCATCGCGCTGCTCATCGGCGGCAAGAACACGCTGAAAGTGGGCGTCAACATGGGCTCGCTCATCGTGCCGTTCATGAA GATGGAAACCGACGAAGACCGCGAAGCCTTCATCGAACTGATCGAAGAGATCATCGACTGGTGGGACGACGCCGGCCTCG ACCACGAGCGCATCGGCGAAACCATCGAGCGCGTGGGCCTGAAACAGTTCCTCGACGGCGTCGGCATCGAGTACGACATC AACCAGATCTCGCGCCCGAGAGACAACCCGTATTTCAAAGCCAAGTACTGA
Upstream 100 bases:
>100_bases CGTCTGAGACGCGCCGGGAGAGGCAACCCCACAACGAAATGGCCGGCGATCTAGGAGTGGACGTCGGCCCACAAAGTATC TGAGAACCAAAGGAGGCAAC
Downstream 100 bases:
>100_bases GAGCCGTCTCTCTGGAGATCACCAGAGAGGGCGACAAAACAACAGCACAAACTCAGCCGCACCGGCTCCCGCAACCGGAG AGCCGGTGCGCATCAACCTA
Product: sulfite reductase, dissimilatory-type, alpha subunit
Products: NA
Alternate protein names: Hydrogensulfite reductase subunit alpha [H]
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MSANDSAVNESCHCGGCGSSGNGKFLNETPMLDQLESGPWPSFISGFKALAERTEKPMLRGVLDQLEYSYKTKMGYWKGG LVTVDGYGAGIITRYSMIKDKFPEAAEFHTMRIQPAPGLHYNTTMLRELCDIWEKYGSGIITLHGQTGDIMLQGIEQDKV QACFDELNQKGWDLGGAGAGMRTGVSCIGPGRCDNACYDNLKLHLEALKHFSPQVHRPEWNYKLKFKFSGCPNDCTNAIM RSDLAVIGTWRDSIQIDHDEVKAWIAEKGVDALVNNVINRCPTKAIRLQDGDIDISTRDCVRCMHCINAMSKALSPGKDK GIALLIGGKNTLKVGVNMGSLIVPFMKMETDEDREAFIELIEEIIDWWDDAGLDHERIGETIERVGLKQFLDGVGIEYDI NQISRPRDNPYFKAKY
Sequences:
>Translated_416_residues MSANDSAVNESCHCGGCGSSGNGKFLNETPMLDQLESGPWPSFISGFKALAERTEKPMLRGVLDQLEYSYKTKMGYWKGG LVTVDGYGAGIITRYSMIKDKFPEAAEFHTMRIQPAPGLHYNTTMLRELCDIWEKYGSGIITLHGQTGDIMLQGIEQDKV QACFDELNQKGWDLGGAGAGMRTGVSCIGPGRCDNACYDNLKLHLEALKHFSPQVHRPEWNYKLKFKFSGCPNDCTNAIM RSDLAVIGTWRDSIQIDHDEVKAWIAEKGVDALVNNVINRCPTKAIRLQDGDIDISTRDCVRCMHCINAMSKALSPGKDK GIALLIGGKNTLKVGVNMGSLIVPFMKMETDEDREAFIELIEEIIDWWDDAGLDHERIGETIERVGLKQFLDGVGIEYDI NQISRPRDNPYFKAKY >Mature_415_residues SANDSAVNESCHCGGCGSSGNGKFLNETPMLDQLESGPWPSFISGFKALAERTEKPMLRGVLDQLEYSYKTKMGYWKGGL VTVDGYGAGIITRYSMIKDKFPEAAEFHTMRIQPAPGLHYNTTMLRELCDIWEKYGSGIITLHGQTGDIMLQGIEQDKVQ ACFDELNQKGWDLGGAGAGMRTGVSCIGPGRCDNACYDNLKLHLEALKHFSPQVHRPEWNYKLKFKFSGCPNDCTNAIMR SDLAVIGTWRDSIQIDHDEVKAWIAEKGVDALVNNVINRCPTKAIRLQDGDIDISTRDCVRCMHCINAMSKALSPGKDKG IALLIGGKNTLKVGVNMGSLIVPFMKMETDEDREAFIELIEEIIDWWDDAGLDHERIGETIERVGLKQFLDGVGIEYDIN QISRPRDNPYFKAKY
Specific function: Catalyzes the reduction of sulfite to sulfide. This is the terminal oxidation reaction in sulfate respiration [H]
COG id: COG2221
COG function: function code C; Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011806 - InterPro: IPR005117 - InterPro: IPR006067 [H]
Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr [H]
EC number: =1.8.99.3 [H]
Molecular weight: Translated: 46351; Mature: 46220
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS00028 ZINC_FINGER_C2H2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANDSAVNESCHCGGCGSSGNGKFLNETPMLDQLESGPWPSFISGFKALAERTEKPMLR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GVLDQLEYSYKTKMGYWKGGLVTVDGYGAGIITRYSMIKDKFPEAAEFHTMRIQPAPGLH HHHHHHHHHHHHCCCEECCCEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC YNTTMLRELCDIWEKYGSGIITLHGQTGDIMLQGIEQDKVQACFDELNQKGWDLGGAGAG CHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCC MRTGVSCIGPGRCDNACYDNLKLHLEALKHFSPQVHRPEWNYKLKFKFSGCPNDCTNAIM HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHH RSDLAVIGTWRDSIQIDHDEVKAWIAEKGVDALVNNVINRCPTKAIRLQDGDIDISTRDC HCCCEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH VRCMHCINAMSKALSPGKDKGIALLIGGKNTLKVGVNMGSLIVPFMKMETDEDREAFIEL HHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHH IEEIIDWWDDAGLDHERIGETIERVGLKQFLDGVGIEYDINQISRPRDNPYFKAKY HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCEECCC >Mature Secondary Structure SANDSAVNESCHCGGCGSSGNGKFLNETPMLDQLESGPWPSFISGFKALAERTEKPMLR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GVLDQLEYSYKTKMGYWKGGLVTVDGYGAGIITRYSMIKDKFPEAAEFHTMRIQPAPGLH HHHHHHHHHHHHCCCEECCCEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC YNTTMLRELCDIWEKYGSGIITLHGQTGDIMLQGIEQDKVQACFDELNQKGWDLGGAGAG CHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCC MRTGVSCIGPGRCDNACYDNLKLHLEALKHFSPQVHRPEWNYKLKFKFSGCPNDCTNAIM HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHH RSDLAVIGTWRDSIQIDHDEVKAWIAEKGVDALVNNVINRCPTKAIRLQDGDIDISTRDC HCCCEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH VRCMHCINAMSKALSPGKDKGIALLIGGKNTLKVGVNMGSLIVPFMKMETDEDREAFIEL HHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHH IEEIIDWWDDAGLDHERIGETIERVGLKQFLDGVGIEYDINQISRPRDNPYFKAKY HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9308173 [H]