| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is kojP [H]
Identifier: 21673667
GI number: 21673667
Start: 798905
End: 801280
Strand: Direct
Name: kojP [H]
Synonym: CT0838
Alternate gene names: 21673667
Gene position: 798905-801280 (Clockwise)
Preceding gene: 21673664
Following gene: 21673668
Centisome position: 37.07
GC content: 56.82
Gene sequence:
>2376_bases ATGACGGGAAGTTCATTGTTAGACGATGGCAAACCGGTGGATGAGCTGGATTCTTTGTTCGAGCTTTCCCCGGAAGAGTG GTTGCTGAGAAAAAAGGGGTTTCGCAAAAGCCCGAAAGCGATTCAGATCAACGAAACCCTGTTGACCACGGGCAACGGCT ACCTCAATGTCCGAGGCAGTCTCGAAGAGCTTCCGCCGGGCCATTGTGGCGGCATGTATCTGGCTGGCGTGTATGACAAG TCGGAAGCCGACGTCGAAGAGCTGGTCAAGTGCCCGATGTGGACCGATGTGTCGGTCTGGCACGAGGGAGAGAAGTTCTG CCTGTCGTGCAATCGCGCCCTTGAGCACGAGCAGGTGCTCGACATGAAAAAAGGGATTCTCCACCGCCGCACCACCTTCA AAAACCAGCACGGTAAAATACTGACTCTCGAAACTTCGCGCCTTGTCTTCATGCACGATCCGCATCGCGGCTACATGCGG GTGAAGATCACGCCGAGGAATTTTTCCGGCCAGATCCGCGTCCTCTCCGGGCTGAACGGCGAGGTCTATAACCGGGGATT TTTTCCGCGCGAGCAGTACAAGCACTTGCAGCTTGAACGGATCGAGCGAGGCAGGAACTTCATGTACCTCGAAATGAAGA CCCGCGAGCGCGGCATCCGCATCGCCGTCGGCGCGTCGTGGAAGATGATGAACGGGCAGGAGCGGAAGCGCCGCTGGGAG CCGAGGATTTACGGCGAGAAGTTCACCAGCGAGATCACCATTGATGCTTCGAGGGGTCACACTTACGCCTTTGAAAAGCT CGCCGTCGTCATGACCAACCGTGACGTGCCGACGGAACGTGCGCACAACATGATGCGGGAAGCGATTTGCAACCTCCGTT GCTACGTGCGTACCGGTGTGCCGGTCGAGATCGGGCGGCATCTCGATGTGTGGCGTGAACTCTGGAAGCAGGCCGACGTT CGGATTGAAGGCGACGACACCGCCCAGCAGGCGCTTCGCTACAACATCTACCAGCTGCTCATCAACGGCCCGTCAAAGCC TGGCCCTATCGGAGCGAAATTCCTCAGCTCGGAGGGGTACATGGGTCACGTGTTCTGGGATACCGAAATTTTCATTTTGC CCTTCTACATCTACAATTTTCCGTCGATGGCGCGCAACATCTTGATGTATCGTTGCAACACCCTGCCCGGCGCGATGATG AACGCCTCGAAGTCGGGTTGTGAGGGTGCCCGCTTTGCCTGGGAGTCGGCCACGACCGGCGAGGATGTGACGCCACGTTT TGCCTCCAAGCTCGAAAAAACCATCCGCCTGATTTACACCGGCATGGAGGAGGAGCATATTGTCTCCGACGTCATTTACG GTGTGGAGCGCTACTTCAGGGTGACCGGCGACGAGAGTTTCCTCTTGCATTGTGGGCTGGAGATGGTGTTTCTGACAGCG CGTTACTGGGCAAGCCGGGTGACGAAGGTGGGCGAGCATTACGAAATTCACAAGGTGATCGGGCCGGATGAATTTCACGA GCACGTCAACAACAACGCCTACACGAACTGGCTGGTCAAATGGCACTTGCGGCTGGCCTCGATGCTTTTCAGGCATGTCA GGAAAACCGCGCCGGAGGCGTTGCAGGAGGTTGCGGGAAAGATCGCGCTCCGCGACGACGAACCGGCTCGCTGGCTCGAG ATCAGCCGTAAGCTCAAATTCAGCCAGGAGGCCGAAACGGGTCTGGTCGAGCAGTTCGACGGCTACTTCGATCTCAAGGA TCGCGTGATCGAACGCTACGACCGTTCGGGCAATCCGGTGCTTCCGGCGGGCGTGACCTACCGGAACATCGGACGCACCC GGCTCATCAAGCAGGCCGATGTGCTGCTTATGATGCTGCTCTTCCCTCATTCGTTCAGTTTCGAGGAGAAAAAGGTCAAC TACGACTTCTATGAACCGCGCACGGTGCACAAGTCCTCCCTGAGCCATTGTACCTACGCCATGATGGGGCTTGCCGTCTC CGAGCGCAACAATGCTTACCGCTACTTCATGAAGACCGCGCAGTTCGACCTCGAAAACCTGCACAACAACACCGAGCTCG GCATCCACGCGGCTTCGGTTGGCGGAAGCTGGCAGACGGTCATTCACGGTTTTGCGGGACTGACGCTCAAATCCGACCGC ATCGTGATCAATCCGTGGCTGCCAAAAAAATGGGAGCGCCTGTCGTTCAGGGTGCGGTGGCGCGAACGCGATGTTTATCT CGATATCACCCATAGCGAGGTGTCGATAAGGATCGATGCTGTTTCGGATGTGACGCTGCCCTGCACGCTGTACGGCCAAA ATTACAAAATCAGGACAAACAAGCCCTATACCCTTCAATACTGTCTGTCAAAATGA
Upstream 100 bases:
>100_bases TTCCTGCAAGGAAGAGCCTGAGCCGGCAACAAGTTTCTCTGTGAAAAGTCGTTAACTGTTCGATCAGCTTGTAATGGGTT TGATGCCCAGAGGAGGGTTC
Downstream 100 bases:
>100_bases CGAAAAGGCCACTTCCATGAAAAAGCTTAGAATTGCGCAGGTTTCCCCCCTGATTGAAAGCGTGCCGCCGAAGAAATATG GGGGCACGGAGCGGGTTGTT
Product: glycosy hydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 791; Mature: 790
Protein sequence:
>791_residues MTGSSLLDDGKPVDELDSLFELSPEEWLLRKKGFRKSPKAIQINETLLTTGNGYLNVRGSLEELPPGHCGGMYLAGVYDK SEADVEELVKCPMWTDVSVWHEGEKFCLSCNRALEHEQVLDMKKGILHRRTTFKNQHGKILTLETSRLVFMHDPHRGYMR VKITPRNFSGQIRVLSGLNGEVYNRGFFPREQYKHLQLERIERGRNFMYLEMKTRERGIRIAVGASWKMMNGQERKRRWE PRIYGEKFTSEITIDASRGHTYAFEKLAVVMTNRDVPTERAHNMMREAICNLRCYVRTGVPVEIGRHLDVWRELWKQADV RIEGDDTAQQALRYNIYQLLINGPSKPGPIGAKFLSSEGYMGHVFWDTEIFILPFYIYNFPSMARNILMYRCNTLPGAMM NASKSGCEGARFAWESATTGEDVTPRFASKLEKTIRLIYTGMEEEHIVSDVIYGVERYFRVTGDESFLLHCGLEMVFLTA RYWASRVTKVGEHYEIHKVIGPDEFHEHVNNNAYTNWLVKWHLRLASMLFRHVRKTAPEALQEVAGKIALRDDEPARWLE ISRKLKFSQEAETGLVEQFDGYFDLKDRVIERYDRSGNPVLPAGVTYRNIGRTRLIKQADVLLMMLLFPHSFSFEEKKVN YDFYEPRTVHKSSLSHCTYAMMGLAVSERNNAYRYFMKTAQFDLENLHNNTELGIHAASVGGSWQTVIHGFAGLTLKSDR IVINPWLPKKWERLSFRVRWRERDVYLDITHSEVSIRIDAVSDVTLPCTLYGQNYKIRTNKPYTLQYCLSK
Sequences:
>Translated_791_residues MTGSSLLDDGKPVDELDSLFELSPEEWLLRKKGFRKSPKAIQINETLLTTGNGYLNVRGSLEELPPGHCGGMYLAGVYDK SEADVEELVKCPMWTDVSVWHEGEKFCLSCNRALEHEQVLDMKKGILHRRTTFKNQHGKILTLETSRLVFMHDPHRGYMR VKITPRNFSGQIRVLSGLNGEVYNRGFFPREQYKHLQLERIERGRNFMYLEMKTRERGIRIAVGASWKMMNGQERKRRWE PRIYGEKFTSEITIDASRGHTYAFEKLAVVMTNRDVPTERAHNMMREAICNLRCYVRTGVPVEIGRHLDVWRELWKQADV RIEGDDTAQQALRYNIYQLLINGPSKPGPIGAKFLSSEGYMGHVFWDTEIFILPFYIYNFPSMARNILMYRCNTLPGAMM NASKSGCEGARFAWESATTGEDVTPRFASKLEKTIRLIYTGMEEEHIVSDVIYGVERYFRVTGDESFLLHCGLEMVFLTA RYWASRVTKVGEHYEIHKVIGPDEFHEHVNNNAYTNWLVKWHLRLASMLFRHVRKTAPEALQEVAGKIALRDDEPARWLE ISRKLKFSQEAETGLVEQFDGYFDLKDRVIERYDRSGNPVLPAGVTYRNIGRTRLIKQADVLLMMLLFPHSFSFEEKKVN YDFYEPRTVHKSSLSHCTYAMMGLAVSERNNAYRYFMKTAQFDLENLHNNTELGIHAASVGGSWQTVIHGFAGLTLKSDR IVINPWLPKKWERLSFRVRWRERDVYLDITHSEVSIRIDAVSDVTLPCTLYGQNYKIRTNKPYTLQYCLSK >Mature_790_residues TGSSLLDDGKPVDELDSLFELSPEEWLLRKKGFRKSPKAIQINETLLTTGNGYLNVRGSLEELPPGHCGGMYLAGVYDKS EADVEELVKCPMWTDVSVWHEGEKFCLSCNRALEHEQVLDMKKGILHRRTTFKNQHGKILTLETSRLVFMHDPHRGYMRV KITPRNFSGQIRVLSGLNGEVYNRGFFPREQYKHLQLERIERGRNFMYLEMKTRERGIRIAVGASWKMMNGQERKRRWEP RIYGEKFTSEITIDASRGHTYAFEKLAVVMTNRDVPTERAHNMMREAICNLRCYVRTGVPVEIGRHLDVWRELWKQADVR IEGDDTAQQALRYNIYQLLINGPSKPGPIGAKFLSSEGYMGHVFWDTEIFILPFYIYNFPSMARNILMYRCNTLPGAMMN ASKSGCEGARFAWESATTGEDVTPRFASKLEKTIRLIYTGMEEEHIVSDVIYGVERYFRVTGDESFLLHCGLEMVFLTAR YWASRVTKVGEHYEIHKVIGPDEFHEHVNNNAYTNWLVKWHLRLASMLFRHVRKTAPEALQEVAGKIALRDDEPARWLEI SRKLKFSQEAETGLVEQFDGYFDLKDRVIERYDRSGNPVLPAGVTYRNIGRTRLIKQADVLLMMLLFPHSFSFEEKKVNY DFYEPRTVHKSSLSHCTYAMMGLAVSERNNAYRYFMKTAQFDLENLHNNTELGIHAASVGGSWQTVIHGFAGLTLKSDRI VINPWLPKKWERLSFRVRWRERDVYLDITHSEVSIRIDAVSDVTLPCTLYGQNYKIRTNKPYTLQYCLSK
Specific function: Hydrolyzes kojibiose in the presence of an inorganic phosphoric acid to form D-glucose and beta-D-glucose-1-phosphoric acid. Can act with alpha-1,2-oligoglucans, such as selaginose, as substrate, but more slowly. Inactive when dissaccharides with linkages
COG id: COG1554
COG function: function code G; Trehalose and maltose hydrolases (possible phosphorylases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 65 family [H]
Homologues:
Organism=Homo sapiens, GI187829418, Length=479, Percent_Identity=28.8100208768267, Blast_Score=158, Evalue=1e-38, Organism=Escherichia coli, GI1787575, Length=723, Percent_Identity=29.5988934993084, Blast_Score=342, Evalue=4e-95, Organism=Saccharomyces cerevisiae, GI6325283, Length=447, Percent_Identity=23.489932885906, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24583760, Length=437, Percent_Identity=25.1716247139588, Blast_Score=111, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR011013 - InterPro: IPR005194 - InterPro: IPR005195 - InterPro: IPR005196 - InterPro: IPR017045 [H]
Pfam domain/function: PF03633 Glyco_hydro_65C; PF03632 Glyco_hydro_65m; PF03636 Glyco_hydro_65N [H]
EC number: =2.4.1.230 [H]
Molecular weight: Translated: 91806; Mature: 91675
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSSLLDDGKPVDELDSLFELSPEEWLLRKKGFRKSPKAIQINETLLTTGNGYLNVRGS CCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEECCEEEECCCCEEEECCC LEELPPGHCGGMYLAGVYDKSEADVEELVKCPMWTDVSVWHEGEKFCLSCNRALEHEQVL HHHCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHH DMKKGILHRRTTFKNQHGKILTLETSRLVFMHDPHRGYMRVKITPRNFSGQIRVLSGLNG HHHHHHHHHHHHCCCCCCCEEEEECCEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCC EVYNRGFFPREQYKHLQLERIERGRNFMYLEMKTRERGIRIAVGASWKMMNGQERKRRWE CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCEEECCCHHHHHCCC PRIYGEKFTSEITIDASRGHTYAFEKLAVVMTNRDVPTERAHNMMREAICNLRCYVRTGV CCCCCCCCCCEEEEECCCCCEEHHHEEEEEEECCCCCHHHHHHHHHHHHHCEEEEEECCC PVEIGRHLDVWRELWKQADVRIEGDDTAQQALRYNIYQLLINGPSKPGPIGAKFLSSEGY CCCCCCHHHHHHHHHHHCCCEECCCCHHHHHHHHHHEEEEECCCCCCCCCCHHEECCCCC MGHVFWDTEIFILPFYIYNFPSMARNILMYRCNTLPGAMMNASKSGCEGARFAWESATTG EEEEEECCEEEEEEHHHHCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCEEECCCCCC EDVTPRFASKLEKTIRLIYTGMEEEHIVSDVIYGVERYFRVTGDESFLLHCGLEMVFLTA CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCEEEECCHHHHHHHH RYWASRVTKVGEHYEIHKVIGPDEFHEHVNNNAYTNWLVKWHLRLASMLFRHVRKTAPEA HHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LQEVAGKIALRDDEPARWLEISRKLKFSQEAETGLVEQFDGYFDLKDRVIERYDRSGNPV HHHHHCEEEECCCCCHHHHHHHHHHCCCCHHHCCHHHHHCCCCCHHHHHHHHHCCCCCCC LPAGVTYRNIGRTRLIKQADVLLMMLLFPHSFSFEEKKVNYDFYEPRTVHKSSLSHCTYA CCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH MMGLAVSERNNAYRYFMKTAQFDLENLHNNTELGIHAASVGGSWQTVIHGFAGLTLKSDR HHHHHEECCCCCEEEEHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCEEECCE IVINPWLPKKWERLSFRVRWRERDVYLDITHSEVSIRIDAVSDVTLPCTLYGQNYKIRTN EEEECCCCCCHHCCEEEEEEEECEEEEEEECCEEEEEEEEECCCEEEEEEECCCEEEECC KPYTLQYCLSK CCEEEEEEECC >Mature Secondary Structure TGSSLLDDGKPVDELDSLFELSPEEWLLRKKGFRKSPKAIQINETLLTTGNGYLNVRGS CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEECCEEEECCCCEEEECCC LEELPPGHCGGMYLAGVYDKSEADVEELVKCPMWTDVSVWHEGEKFCLSCNRALEHEQVL HHHCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHH DMKKGILHRRTTFKNQHGKILTLETSRLVFMHDPHRGYMRVKITPRNFSGQIRVLSGLNG HHHHHHHHHHHHCCCCCCCEEEEECCEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCC EVYNRGFFPREQYKHLQLERIERGRNFMYLEMKTRERGIRIAVGASWKMMNGQERKRRWE CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCEEECCCHHHHHCCC PRIYGEKFTSEITIDASRGHTYAFEKLAVVMTNRDVPTERAHNMMREAICNLRCYVRTGV CCCCCCCCCCEEEEECCCCCEEHHHEEEEEEECCCCCHHHHHHHHHHHHHCEEEEEECCC PVEIGRHLDVWRELWKQADVRIEGDDTAQQALRYNIYQLLINGPSKPGPIGAKFLSSEGY CCCCCCHHHHHHHHHHHCCCEECCCCHHHHHHHHHHEEEEECCCCCCCCCCHHEECCCCC MGHVFWDTEIFILPFYIYNFPSMARNILMYRCNTLPGAMMNASKSGCEGARFAWESATTG EEEEEECCEEEEEEHHHHCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCEEECCCCCC EDVTPRFASKLEKTIRLIYTGMEEEHIVSDVIYGVERYFRVTGDESFLLHCGLEMVFLTA CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCEEEECCHHHHHHHH RYWASRVTKVGEHYEIHKVIGPDEFHEHVNNNAYTNWLVKWHLRLASMLFRHVRKTAPEA HHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LQEVAGKIALRDDEPARWLEISRKLKFSQEAETGLVEQFDGYFDLKDRVIERYDRSGNPV HHHHHCEEEECCCCCHHHHHHHHHHCCCCHHHCCHHHHHCCCCCHHHHHHHHHCCCCCCC LPAGVTYRNIGRTRLIKQADVLLMMLLFPHSFSFEEKKVNYDFYEPRTVHKSSLSHCTYA CCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH MMGLAVSERNNAYRYFMKTAQFDLENLHNNTELGIHAASVGGSWQTVIHGFAGLTLKSDR HHHHHEECCCCCEEEEHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCEEECCE IVINPWLPKKWERLSFRVRWRERDVYLDITHSEVSIRIDAVSDVTLPCTLYGQNYKIRTN EEEECCCCCCHHCCEEEEEEEECEEEEEEECCEEEEEEEEECCCEEEEEEECCCEEEECC KPYTLQYCLSK CCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA