| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673642
Identifier: 21673642
GI number: 21673642
Start: 774045
End: 775115
Strand: Direct
Name: 21673642
Synonym: CT0813
Alternate gene names: NA
Gene position: 774045-775115 (Clockwise)
Preceding gene: 21673641
Following gene: 21673651
Centisome position: 35.92
GC content: 59.01
Gene sequence:
>1071_bases ATGCCTGACGTGATGACCGTTCTGATCAATATTCTTTCGGCTTCCTGGTCGGTGTTGCTTGATGCGGCGCCTTGGGTGCT TTTCGGTTTTCTGGTTGCTGGCCTCGTCAAGGCGTTTGTGCCTGAAAAGCTCGTGGCGGCTCATCTTGGGCGTGGCTTTT CGAGTATCGTGAAAGCCTCCGCTATCGGCGTGCCGATTCCGCTGTGCAGTTGCGGGGTGATTCCGGCGGCGGCGGGTCTC AAAAAACAGGGCGCGGGAAAGGGGGCGGTGGCCTCGTTTCTTGTTTCCACTCCGGAAACCGGCATCGACTCGATTGCAAT CACTTACGCGCTGCTCGATCCACTGATGACGATTTTCAGACCTGTGGCGGCTTTCGTGACGGCCATTGCGACCGGCGTTG CCGTCTCCTTCACCGGCACTGACGAGCCTGCTGCTGCACCTGCCTCTGGGGGCGGGTCTTCGGGTTCAAGTTGTTCATGC GGCTGTGGTCACAAAAAAGTCGAGAAGCCAGGTGTGGCGCAGAAGATCAGGTCGGGTTTCTCCTTCGCGTTTGGCGAACT GCTCGGTGATGTGGGTGTCTGGCTGCTGGGCGGCGTGCTGCTTGCCGGTCTCATCTCGGTGTTCGTATCGGGGCAGTTCG TGGAGCGTTACCTGTCGAACGATGTCGTTGCCATGGTTATGATGCTTGCGATTTCGGTGCCGATGTACGTCTGCGCGACC TCATCGACACCCATTGTCGCGGCGCTCGCGTTGAAAGGTATTTCGCCGGGCGCGGCGCTCGTGTTTCTTCTCGCCGGTCC GGCGACCAACGCCGCATCGCTGCCGGTGATCTCGAAACTGCTCGGCAAAAAGGGCACGGTGGCCTATCTCGTGGTCATTG TGCTGATGTCGCTCCTGTTCGGCATCCTTGTCAACTACCTGTACGCCTGGCTCGGTCTGGATACGAAAAATTGGGTAAGC CGTGGTGCGCACGAGGAGGGCGGAGTTGTCGCTATCGTTTCGGCAATCGTGCTTGTCGTGCTGATCGCGCGAGCCCGCTT CGAAGCATGGCGATCTGTCCGTGAGCATTAA
Upstream 100 bases:
>100_bases GGGTTTGAACATGTGCAAGAGAGATAGGAGGGCTTTTTTTTTGATCAAATCATGAATATGTGATCATGCGAAAATGTATA AACAGCCAAAGTGGTGAACC
Downstream 100 bases:
>100_bases GGCGCGTGCAGCGGGATTTTCTTATCCTTTTTTTCCGACTGGCGCGAGGTAGATCGTGAACTCCTCTTCGCCATCGACGT CAAGGAGGCGATCCATCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Permease Family
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MPDVMTVLINILSASWSVLLDAAPWVLFGFLVAGLVKAFVPEKLVAAHLGRGFSSIVKASAIGVPIPLCSCGVIPAAAGL KKQGAGKGAVASFLVSTPETGIDSIAITYALLDPLMTIFRPVAAFVTAIATGVAVSFTGTDEPAAAPASGGGSSGSSCSC GCGHKKVEKPGVAQKIRSGFSFAFGELLGDVGVWLLGGVLLAGLISVFVSGQFVERYLSNDVVAMVMMLAISVPMYVCAT SSTPIVAALALKGISPGAALVFLLAGPATNAASLPVISKLLGKKGTVAYLVVIVLMSLLFGILVNYLYAWLGLDTKNWVS RGAHEEGGVVAIVSAIVLVVLIARARFEAWRSVREH
Sequences:
>Translated_356_residues MPDVMTVLINILSASWSVLLDAAPWVLFGFLVAGLVKAFVPEKLVAAHLGRGFSSIVKASAIGVPIPLCSCGVIPAAAGL KKQGAGKGAVASFLVSTPETGIDSIAITYALLDPLMTIFRPVAAFVTAIATGVAVSFTGTDEPAAAPASGGGSSGSSCSC GCGHKKVEKPGVAQKIRSGFSFAFGELLGDVGVWLLGGVLLAGLISVFVSGQFVERYLSNDVVAMVMMLAISVPMYVCAT SSTPIVAALALKGISPGAALVFLLAGPATNAASLPVISKLLGKKGTVAYLVVIVLMSLLFGILVNYLYAWLGLDTKNWVS RGAHEEGGVVAIVSAIVLVVLIARARFEAWRSVREH >Mature_355_residues PDVMTVLINILSASWSVLLDAAPWVLFGFLVAGLVKAFVPEKLVAAHLGRGFSSIVKASAIGVPIPLCSCGVIPAAAGLK KQGAGKGAVASFLVSTPETGIDSIAITYALLDPLMTIFRPVAAFVTAIATGVAVSFTGTDEPAAAPASGGGSSGSSCSCG CGHKKVEKPGVAQKIRSGFSFAFGELLGDVGVWLLGGVLLAGLISVFVSGQFVERYLSNDVVAMVMMLAISVPMYVCATS STPIVAALALKGISPGAALVFLLAGPATNAASLPVISKLLGKKGTVAYLVVIVLMSLLFGILVNYLYAWLGLDTKNWVSR GAHEEGGVVAIVSAIVLVVLIARARFEAWRSVREH
Specific function: Unknown
COG id: COG0701
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36488; Mature: 36356
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDVMTVLINILSASWSVLLDAAPWVLFGFLVAGLVKAFVPEKLVAAHLGRGFSSIVKAS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AIGVPIPLCSCGVIPAAAGLKKQGAGKGAVASFLVSTPETGIDSIAITYALLDPLMTIFR HCCCCCCHHHCCCHHHHCCCHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH PVAAFVTAIATGVAVSFTGTDEPAAAPASGGGSSGSSCSCGCGHKKVEKPGVAQKIRSGF HHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH SFAFGELLGDVGVWLLGGVLLAGLISVFVSGQFVERYLSNDVVAMVMMLAISVPMYVCAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEC SSTPIVAALALKGISPGAALVFLLAGPATNAASLPVISKLLGKKGTVAYLVVIVLMSLLF CCCHHHHHHHHHCCCCHHHEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH GILVNYLYAWLGLDTKNWVSRGAHEEGGVVAIVSAIVLVVLIARARFEAWRSVREH HHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PDVMTVLINILSASWSVLLDAAPWVLFGFLVAGLVKAFVPEKLVAAHLGRGFSSIVKAS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AIGVPIPLCSCGVIPAAAGLKKQGAGKGAVASFLVSTPETGIDSIAITYALLDPLMTIFR HCCCCCCHHHCCCHHHHCCCHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH PVAAFVTAIATGVAVSFTGTDEPAAAPASGGGSSGSSCSCGCGHKKVEKPGVAQKIRSGF HHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH SFAFGELLGDVGVWLLGGVLLAGLISVFVSGQFVERYLSNDVVAMVMMLAISVPMYVCAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEC SSTPIVAALALKGISPGAALVFLLAGPATNAASLPVISKLLGKKGTVAYLVVIVLMSLLF CCCHHHHHHHHHCCCCHHHEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH GILVNYLYAWLGLDTKNWVSRGAHEEGGVVAIVSAIVLVVLIARARFEAWRSVREH HHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA