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The map label for this gene is pds [H]

Identifier: 21673636

GI number: 21673636

Start: 770217

End: 771614

Strand: Direct

Name: pds [H]

Synonym: CT0807

Alternate gene names: 21673636

Gene position: 770217-771614 (Clockwise)

Preceding gene: 21673635

Following gene: 21673640

Centisome position: 35.74

GC content: 59.37

Gene sequence:

>1398_bases
TTGCAAGGAATGAACGGAGAGAAAAAAAAGGTTCTGATCATCGGCGGCGGCCTTGCGGGTCTGACCGCGGTCAAGAGGCT
CGTTGATCGCGGGTTTCAGGTCAAGGTGCTCGAAAAACGACCCATCTATGGCGGCAAGGTTTCTGCCTGGAAGGACGAGG
AGGGGGACTGGATCGAATCCGGCACCCACTGCTTTTTTGGCGCGTACGGCGTGCTCTACGATCTCATGAAGGAGATCAAG
ACCTACCACGCCGTCATCTGGAAGGAACACCAGCTCACCTACACGCTCGAAGGGGGCAACAGCTTTACCTTCAACACCTG
GGACCTGCCCAGCCCGCTGCATCTGCTTCCGGCGATCATCAAGAACGGCTACTTCACCTTCGGCGAGATGGCCGCTTTCT
CGAAGTCGCTGATTCCGCTTGCGCTCCAGAAGGCCAACTACCCGCCAACGCAGGATCACCTCACCTTCGCCGAGTGGGCC
GAGCAAAAAAAATTCGGCAAGCGGTTGATGGACAAGATGTTCCGCCCGATGTCGCTCGCGCTCAAGTTCATTCCGCCGGA
GGAGATTTCGGCCAAGATCATTCTTGACGTCACCGAGACCTTCTACCGCATTCCCGATTCGTCGCGCATGGGCTTCCTGA
AAGGCTCGCCGCAGGAGTACCTGCATCAGCCGCTCGTCGATTACTCCACGCAGAAAGGCGCGGTGTTCCAGAACAACATC
ACGGTGGACGAGCTGCTCTTCGACGGCCAGCAGATTCGCGGCGTACAGTTGCGCAACGGTGAGATTCTCGACGCGGATTA
CTATGTCGCCGCGCTGCCGATTCACAATCTCTGCAAAGTGCTGCCGTCGTCGCTCAAGCAGCAAGACCGCTTTTTCGGTG
ATCTCGACAGGCTGAAGGGCGTGCCGGTCATCTCGGTGCAGCTCTGGTACGACCGCGAAATTTCGCCTATCGACAACGTG
CTCTTCAGTCCGGATGGCGTGATTCCGGTCTACGCCAATCTCGCCCGCACCACGCCCGACTACCGCATGCTGCGCGGCGA
GCGCTTCGAGGGCAAGACGCGCTTCGAGTTCTGCGTCGCCCCTGCGCGTGAGCTGATGGCGCTGACCAAAGAGGAGATCA
TCGCGCGGGTTGACCAAAGCGTTCGGGCCAACTTCCCGAAGGAGACGCAGGGGGCGAAAATCCTCAAGTCCACGCTGGTC
AAGATTCCGCGCTCGGTCTATGCGCCGCTGCCGGGGATGGAAAAGTTCCGCCCGACGCAGAAGACGCCGGTTGGAAATCT
GTTCCTCGCGGGCGGATTCTCGCAGCAGCTCTATTACGATTCGATGGGCGGGGCGGTGATGAGCGCCAATCTGGCGGTCG
ATGCGCTTGTGAAGGCGGCCTCCGACAATGGCCATTGA

Upstream 100 bases:

>100_bases
GAGCTTGAATTTATCGACGAAGCGACGCTGTCGCGGGCGATGGAGGGGCGCTCGGCCATCTGAGCCGCCAGCAGTCGCAA
CAACAGTTATTCAGTCATAT

Downstream 100 bases:

>100_bases
CGGTCGCTGGAAAAGATTCGGGAAACTTTTCGATACCGTGCAAAAGTTGTTCTTTTTCCCGATTTAAATGTTATATTTGC
TGACCTTTTTGAAAGTGACC

Product: phytoene desaturase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MQGMNGEKKKVLIIGGGLAGLTAVKRLVDRGFQVKVLEKRPIYGGKVSAWKDEEGDWIESGTHCFFGAYGVLYDLMKEIK
TYHAVIWKEHQLTYTLEGGNSFTFNTWDLPSPLHLLPAIIKNGYFTFGEMAAFSKSLIPLALQKANYPPTQDHLTFAEWA
EQKKFGKRLMDKMFRPMSLALKFIPPEEISAKIILDVTETFYRIPDSSRMGFLKGSPQEYLHQPLVDYSTQKGAVFQNNI
TVDELLFDGQQIRGVQLRNGEILDADYYVAALPIHNLCKVLPSSLKQQDRFFGDLDRLKGVPVISVQLWYDREISPIDNV
LFSPDGVIPVYANLARTTPDYRMLRGERFEGKTRFEFCVAPARELMALTKEEIIARVDQSVRANFPKETQGAKILKSTLV
KIPRSVYAPLPGMEKFRPTQKTPVGNLFLAGGFSQQLYYDSMGGAVMSANLAVDALVKAASDNGH

Sequences:

>Translated_465_residues
MQGMNGEKKKVLIIGGGLAGLTAVKRLVDRGFQVKVLEKRPIYGGKVSAWKDEEGDWIESGTHCFFGAYGVLYDLMKEIK
TYHAVIWKEHQLTYTLEGGNSFTFNTWDLPSPLHLLPAIIKNGYFTFGEMAAFSKSLIPLALQKANYPPTQDHLTFAEWA
EQKKFGKRLMDKMFRPMSLALKFIPPEEISAKIILDVTETFYRIPDSSRMGFLKGSPQEYLHQPLVDYSTQKGAVFQNNI
TVDELLFDGQQIRGVQLRNGEILDADYYVAALPIHNLCKVLPSSLKQQDRFFGDLDRLKGVPVISVQLWYDREISPIDNV
LFSPDGVIPVYANLARTTPDYRMLRGERFEGKTRFEFCVAPARELMALTKEEIIARVDQSVRANFPKETQGAKILKSTLV
KIPRSVYAPLPGMEKFRPTQKTPVGNLFLAGGFSQQLYYDSMGGAVMSANLAVDALVKAASDNGH
>Mature_465_residues
MQGMNGEKKKVLIIGGGLAGLTAVKRLVDRGFQVKVLEKRPIYGGKVSAWKDEEGDWIESGTHCFFGAYGVLYDLMKEIK
TYHAVIWKEHQLTYTLEGGNSFTFNTWDLPSPLHLLPAIIKNGYFTFGEMAAFSKSLIPLALQKANYPPTQDHLTFAEWA
EQKKFGKRLMDKMFRPMSLALKFIPPEEISAKIILDVTETFYRIPDSSRMGFLKGSPQEYLHQPLVDYSTQKGAVFQNNI
TVDELLFDGQQIRGVQLRNGEILDADYYVAALPIHNLCKVLPSSLKQQDRFFGDLDRLKGVPVISVQLWYDREISPIDNV
LFSPDGVIPVYANLARTTPDYRMLRGERFEGKTRFEFCVAPARELMALTKEEIIARVDQSVRANFPKETQGAKILKSTLV
KIPRSVYAPLPGMEKFRPTQKTPVGNLFLAGGFSQQLYYDSMGGAVMSANLAVDALVKAASDNGH

Specific function: This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene [H]

COG id: COG3349

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001613
- InterPro:   IPR002937
- InterPro:   IPR014102 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 52254; Mature: 52254

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGMNGEKKKVLIIGGGLAGLTAVKRLVDRGFQVKVLEKRPIYGGKVSAWKDEEGDWIES
CCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHC
GTHCFFGAYGVLYDLMKEIKTYHAVIWKEHQLTYTLEGGNSFTFNTWDLPSPLHLLPAII
CCCHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEEECCCEEEEECCCCCCHHHHHHHHH
KNGYFTFGEMAAFSKSLIPLALQKANYPPTQDHLTFAEWAEQKKFGKRLMDKMFRPMSLA
HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHE
LKFIPPEEISAKIILDVTETFYRIPDSSRMGFLKGSPQEYLHQPLVDYSTQKGAVFQNNI
EECCCCHHCCEEEEEEEHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHCCCCCCCEEECCC
TVDELLFDGQQIRGVQLRNGEILDADYYVAALPIHNLCKVLPSSLKQQDRFFGDLDRLKG
CHHHHHHCCCCCCEEEECCCEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHCC
VPVISVQLWYDREISPIDNVLFSPDGVIPVYANLARTTPDYRMLRGERFEGKTRFEFCVA
CCEEEEEEEECCCCCHHHHHEECCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCEEHH
PARELMALTKEEIIARVDQSVRANFPKETQGAKILKSTLVKIPRSVYAPLPGMEKFRPTQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCHHHCCCCC
KTPVGNLFLAGGFSQQLYYDSMGGAVMSANLAVDALVKAASDNGH
CCCCCCEEEECCCCHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQGMNGEKKKVLIIGGGLAGLTAVKRLVDRGFQVKVLEKRPIYGGKVSAWKDEEGDWIES
CCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHC
GTHCFFGAYGVLYDLMKEIKTYHAVIWKEHQLTYTLEGGNSFTFNTWDLPSPLHLLPAII
CCCHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEEECCCEEEEECCCCCCHHHHHHHHH
KNGYFTFGEMAAFSKSLIPLALQKANYPPTQDHLTFAEWAEQKKFGKRLMDKMFRPMSLA
HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHE
LKFIPPEEISAKIILDVTETFYRIPDSSRMGFLKGSPQEYLHQPLVDYSTQKGAVFQNNI
EECCCCHHCCEEEEEEEHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHCCCCCCCEEECCC
TVDELLFDGQQIRGVQLRNGEILDADYYVAALPIHNLCKVLPSSLKQQDRFFGDLDRLKG
CHHHHHHCCCCCCEEEECCCEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHCC
VPVISVQLWYDREISPIDNVLFSPDGVIPVYANLARTTPDYRMLRGERFEGKTRFEFCVA
CCEEEEEEEECCCCCHHHHHEECCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCEEHH
PARELMALTKEEIIARVDQSVRANFPKETQGAKILKSTLVKIPRSVYAPLPGMEKFRPTQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCHHHCCCCC
KTPVGNLFLAGGFSQQLYYDSMGGAVMSANLAVDALVKAASDNGH
CCCCCCEEEECCCCHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1581575; 8905231 [H]