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The map label for this gene is ybbK [C]

Identifier: 21673626

GI number: 21673626

Start: 762268

End: 763017

Strand: Direct

Name: ybbK [C]

Synonym: CT0796

Alternate gene names: 21673626

Gene position: 762268-763017 (Clockwise)

Preceding gene: 21673625

Following gene: 21673627

Centisome position: 35.37

GC content: 56.8

Gene sequence:

>750_bases
ATGCTTTTCATGAATATTCTGGTTTTACTGGCGCTGGCGGTGGCGTTTTTCGTTTCCGCGGTCAAGATTCTGCCCGAGTA
TGAGCGGGCAGTCATATTCCGGCTTGGCCGGATTATAAGAGCCAAGGGGCCGGGACTGATCATTCTGATTCCCTATATCG
ACCGGATGGTGAGGGTTGACCTGAGAACGGTGACGCTTGACGTGCCTCCGCAGGACATCATCACGCGCGACAACGTTTCG
GTCAAGGTGAGTGCCGTGGTCTACTTCCGGGTGATCGACCCGATCAAGGCGATCATCGATGTGGCCGACTTCCATTTCGC
CACCTCGCAGCTCGCCCAGACGACCCTGCGCAGCGTTTGCGGGCAGGGCGAGATGGATAATCTGCTCGCTGAGCGTGACG
AGATCAATGAACGCATCCAGTCCATTCTCGACAAGGATACCGCGCCGTGGGGGGTGAAGGTCGGCAAGGTCGAAGTCAAG
GAGATCGACCTTCCCGAGGGGATGCGCCGGGCGATGGCCAAACAGGCCGAGGCCGAGCGCGAGCGCCGCTCCAAGATCAT
CAATGCCGAGGGCGAGTTCCAGGCGGCACAGCGTATCTCTGAAGCTGCAGCCATTATTGCGCAGAATCCGGCAGCCTTGC
AGTTGCGCTATCTCCAGACCTTGCAGGATATCGCCGTTGAGAACAACTCGACTACGATTTTTCCTGTGCCGATCGATCTG
TTAACGTCATTTTTTGAGAAAAAAGCGTGA

Upstream 100 bases:

>100_bases
GCATCGGCAAACGGTTTGATTCCTGCCGGATCACAGGTAACGGTCACAGGGATCGAGGGGATGAGGCTCATGGTGAAACA
AAATAGCAAGGAGGAGTGAT

Downstream 100 bases:

>100_bases
TCCGGTTTTCCATTTCTTCAATCATCAAACGATACGGTCATGATTACCATCAAGTCGATTCTCTGTCCGATGGATTTTTC
CGATGCGTCGAAGAAGGCAT

Product: band 7 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MLFMNILVLLALAVAFFVSAVKILPEYERAVIFRLGRIIRAKGPGLIILIPYIDRMVRVDLRTVTLDVPPQDIITRDNVS
VKVSAVVYFRVIDPIKAIIDVADFHFATSQLAQTTLRSVCGQGEMDNLLAERDEINERIQSILDKDTAPWGVKVGKVEVK
EIDLPEGMRRAMAKQAEAERERRSKIINAEGEFQAAQRISEAAAIIAQNPAALQLRYLQTLQDIAVENNSTTIFPVPIDL
LTSFFEKKA

Sequences:

>Translated_249_residues
MLFMNILVLLALAVAFFVSAVKILPEYERAVIFRLGRIIRAKGPGLIILIPYIDRMVRVDLRTVTLDVPPQDIITRDNVS
VKVSAVVYFRVIDPIKAIIDVADFHFATSQLAQTTLRSVCGQGEMDNLLAERDEINERIQSILDKDTAPWGVKVGKVEVK
EIDLPEGMRRAMAKQAEAERERRSKIINAEGEFQAAQRISEAAAIIAQNPAALQLRYLQTLQDIAVENNSTTIFPVPIDL
LTSFFEKKA
>Mature_249_residues
MLFMNILVLLALAVAFFVSAVKILPEYERAVIFRLGRIIRAKGPGLIILIPYIDRMVRVDLRTVTLDVPPQDIITRDNVS
VKVSAVVYFRVIDPIKAIIDVADFHFATSQLAQTTLRSVCGQGEMDNLLAERDEINERIQSILDKDTAPWGVKVGKVEVK
EIDLPEGMRRAMAKQAEAERERRSKIINAEGEFQAAQRISEAAAIIAQNPAALQLRYLQTLQDIAVENNSTTIFPVPIDL
LTSFFEKKA

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI221316744, Length=238, Percent_Identity=48.7394957983193, Blast_Score=229, Evalue=1e-60,
Organism=Homo sapiens, GI21686995, Length=238, Percent_Identity=48.7394957983193, Blast_Score=229, Evalue=1e-60,
Organism=Homo sapiens, GI38016911, Length=231, Percent_Identity=49.7835497835498, Blast_Score=219, Evalue=1e-57,
Organism=Homo sapiens, GI7657615, Length=227, Percent_Identity=38.3259911894273, Blast_Score=166, Evalue=2e-41,
Organism=Homo sapiens, GI7305503, Length=183, Percent_Identity=36.6120218579235, Blast_Score=133, Evalue=2e-31,
Organism=Homo sapiens, GI20149563, Length=160, Percent_Identity=36.25, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI38016907, Length=57, Percent_Identity=59.6491228070175, Blast_Score=76, Evalue=3e-14,
Organism=Escherichia coli, GI1786697, Length=196, Percent_Identity=35.7142857142857, Blast_Score=143, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI71987612, Length=250, Percent_Identity=49.6, Blast_Score=224, Evalue=4e-59,
Organism=Caenorhabditis elegans, GI25153583, Length=250, Percent_Identity=49.6, Blast_Score=224, Evalue=4e-59,
Organism=Caenorhabditis elegans, GI71987621, Length=250, Percent_Identity=49.6, Blast_Score=223, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI17569493, Length=237, Percent_Identity=45.9915611814346, Blast_Score=217, Evalue=4e-57,
Organism=Caenorhabditis elegans, GI17570459, Length=250, Percent_Identity=44.8, Blast_Score=217, Evalue=4e-57,
Organism=Caenorhabditis elegans, GI193209764, Length=237, Percent_Identity=45.9915611814346, Blast_Score=217, Evalue=6e-57,
Organism=Caenorhabditis elegans, GI193210507, Length=244, Percent_Identity=48.3606557377049, Blast_Score=215, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI17570161, Length=244, Percent_Identity=48.3606557377049, Blast_Score=215, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI17569497, Length=237, Percent_Identity=44.3037974683544, Blast_Score=211, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI71989948, Length=234, Percent_Identity=49.1452991452991, Blast_Score=211, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17569499, Length=249, Percent_Identity=46.9879518072289, Blast_Score=209, Evalue=9e-55,
Organism=Caenorhabditis elegans, GI32566490, Length=224, Percent_Identity=47.3214285714286, Blast_Score=193, Evalue=8e-50,
Organism=Caenorhabditis elegans, GI71989955, Length=184, Percent_Identity=51.0869565217391, Blast_Score=167, Evalue=5e-42,
Organism=Caenorhabditis elegans, GI32564147, Length=188, Percent_Identity=37.7659574468085, Blast_Score=135, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI71989963, Length=122, Percent_Identity=53.2786885245902, Blast_Score=132, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17542664, Length=174, Percent_Identity=28.735632183908, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI45556022, Length=246, Percent_Identity=49.1869918699187, Blast_Score=233, Evalue=6e-62,
Organism=Drosophila melanogaster, GI18860517, Length=249, Percent_Identity=48.1927710843374, Blast_Score=226, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24657857, Length=249, Percent_Identity=49.7991967871486, Blast_Score=224, Evalue=4e-59,
Organism=Drosophila melanogaster, GI62484448, Length=249, Percent_Identity=49.7991967871486, Blast_Score=224, Evalue=5e-59,
Organism=Drosophila melanogaster, GI281365664, Length=249, Percent_Identity=49.7991967871486, Blast_Score=224, Evalue=5e-59,
Organism=Drosophila melanogaster, GI62484274, Length=249, Percent_Identity=49.7991967871486, Blast_Score=223, Evalue=1e-58,
Organism=Drosophila melanogaster, GI28573263, Length=244, Percent_Identity=42.2131147540984, Blast_Score=203, Evalue=8e-53,
Organism=Drosophila melanogaster, GI21356845, Length=247, Percent_Identity=40.4858299595142, Blast_Score=197, Evalue=5e-51,
Organism=Drosophila melanogaster, GI281361631, Length=230, Percent_Identity=41.304347826087, Blast_Score=191, Evalue=3e-49,
Organism=Drosophila melanogaster, GI281361633, Length=230, Percent_Identity=41.304347826087, Blast_Score=191, Evalue=4e-49,
Organism=Drosophila melanogaster, GI281361635, Length=185, Percent_Identity=40.5405405405405, Blast_Score=149, Evalue=2e-36,
Organism=Drosophila melanogaster, GI45550506, Length=184, Percent_Identity=40.2173913043478, Blast_Score=139, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 27874; Mature: 27874

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFMNILVLLALAVAFFVSAVKILPEYERAVIFRLGRIIRAKGPGLIILIPYIDRMVRVD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHH
LRTVTLDVPPQDIITRDNVSVKVSAVVYFRVIDPIKAIIDVADFHFATSQLAQTTLRSVC
EEEEEEECCCHHHEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GQGEMDNLLAERDEINERIQSILDKDTAPWGVKVGKVEVKEIDLPEGMRRAMAKQAEAER
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECEEEEEECCCCHHHHHHHHHHHHHHH
ERRSKIINAEGEFQAAQRISEAAAIIAQNPAALQLRYLQTLQDIAVENNSTTIFPVPIDL
HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHH
LTSFFEKKA
HHHHHHHCC
>Mature Secondary Structure
MLFMNILVLLALAVAFFVSAVKILPEYERAVIFRLGRIIRAKGPGLIILIPYIDRMVRVD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHH
LRTVTLDVPPQDIITRDNVSVKVSAVVYFRVIDPIKAIIDVADFHFATSQLAQTTLRSVC
EEEEEEECCCHHHEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GQGEMDNLLAERDEINERIQSILDKDTAPWGVKVGKVEVKEIDLPEGMRRAMAKQAEAER
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECEEEEEECCCCHHHHHHHHHHHHHHH
ERRSKIINAEGEFQAAQRISEAAAIIAQNPAALQLRYLQTLQDIAVENNSTTIFPVPIDL
HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHH
LTSFFEKKA
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]