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The map label for this gene is ydeM [H]

Identifier: 21673622

GI number: 21673622

Start: 758961

End: 760145

Strand: Direct

Name: ydeM [H]

Synonym: CT0792

Alternate gene names: 21673622

Gene position: 758961-760145 (Clockwise)

Preceding gene: 21673621

Following gene: 21673623

Centisome position: 35.22

GC content: 58.23

Gene sequence:

>1185_bases
ATGACGAGCAGAGAGGAGTTTCTCGAAAAACTCGCTCAGGCAGGCACGCTGAACCTGATTTTTCAACTGACCGATCAGTG
TGCGCTTTCGTGCCGGTATTGCTTCGCGAAAGGCTCCCATCCATCCGGAGGCCTTCGCATTGCCGATGACCTGCTCGATG
CGGCCATCCGTAGCGCGTTCGATACGCGCCACCACCAGGTCTCCTTCGAGTGGACAGGAGGAGAGCCGTTTTTCGCAGGC
ATCGATTTTTATCGCAAGGTCGATCGCCTCCAAAAAAAGTACGCTACCAAGCCCTACGCGAATACCATTCAGACGAGTGG
CTACGTGCATGACCGGGAGTTGATCGCCTGGCTTGCCGGGCACGGTTTTCGCATCTCCTCTACCATTGACGGCCCGCCGG
AACTGCATGATTTCCAGCGCCCTGTGAATGGCGGCGGCCCGTCGCTCGGCGCGGTGCTCGCAACGCGCGAAACGATCATC
GAGCATCAGGGGCACTGTGGCTGCATTTGCACGGTTACGCGGAACAGCCTCGGCAAGGAGGGGGCGATTCTTGATTACTA
CCGTTCGCTCGGCATTGAAGCCTTTCACAGCAATCCGTATTACTATTTTTCCAAAAATCTTGTTGGCGACGAAAGTCTCG
CGCTTGATGCTGACGGCTACGCCGCGTATTTTATCGCCCAGTTCAACGCCTGGTTTGAGGGCGGGCGCAAGCTCCCGATG
CCCGGCACGCTCAACTACATTCTGCGCTCGCTGACTGCAGGAGCCGGGTTGAAGCAGTCGGTCTGCACCTTCGGCGGGCG
CTGCCTGACCAATTTTCTGGCCATCACGCCCGATGGCGATGCGTGGCTTTGTCCCAAGTTCGCGGGGTTCGATGAGATGC
GCCTCGGCAACGTTGGCAAGATGGCTATCACCGACATCCTTTCTGACGCCAATCCCGCCATGGCGCGCCTCATCGACGAG
CGCCTGGATGCGATACACACCTGCGAAGCGGATGAGTGCCGCTTTCAGTACCTTTGCAACGCGGGGTGTCCTTACTACTC
TTTCATCGCCAGCGGAGGCCGGAACATCGCCGTGAAGGATTCCCTTTGCACAGGCAAGCAGCTGCTTTTCGAATACCTCG
AATCGGTGGTCGAGCTGATCGATCCCGCTCGACTTCCCGAACCCAGCCCCCTCGAACATGCGTAA

Upstream 100 bases:

>100_bases
ACATAATGATTATTCGGATAGCGGCGTGCACACGGACAGCCACGGCAACGAGCACTGCAACACGCACGGCGACGCGAACC
GTTATTGAAGGGCGACCGGT

Downstream 100 bases:

>100_bases
CATTATCTGTCGCACGGAGGCTGTCCGCCGTCTTTGCATTGTCGCGTTGCTCGCTCTGCTTCTTTTGCCCGTCGAGTGAT
TCCTTTTTTGTGCCGTGAAT

Product: AslB/AtsB family protein

Products: NA

Alternate protein names: AnSME homolog [H]

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MTSREEFLEKLAQAGTLNLIFQLTDQCALSCRYCFAKGSHPSGGLRIADDLLDAAIRSAFDTRHHQVSFEWTGGEPFFAG
IDFYRKVDRLQKKYATKPYANTIQTSGYVHDRELIAWLAGHGFRISSTIDGPPELHDFQRPVNGGGPSLGAVLATRETII
EHQGHCGCICTVTRNSLGKEGAILDYYRSLGIEAFHSNPYYYFSKNLVGDESLALDADGYAAYFIAQFNAWFEGGRKLPM
PGTLNYILRSLTAGAGLKQSVCTFGGRCLTNFLAITPDGDAWLCPKFAGFDEMRLGNVGKMAITDILSDANPAMARLIDE
RLDAIHTCEADECRFQYLCNAGCPYYSFIASGGRNIAVKDSLCTGKQLLFEYLESVVELIDPARLPEPSPLEHA

Sequences:

>Translated_394_residues
MTSREEFLEKLAQAGTLNLIFQLTDQCALSCRYCFAKGSHPSGGLRIADDLLDAAIRSAFDTRHHQVSFEWTGGEPFFAG
IDFYRKVDRLQKKYATKPYANTIQTSGYVHDRELIAWLAGHGFRISSTIDGPPELHDFQRPVNGGGPSLGAVLATRETII
EHQGHCGCICTVTRNSLGKEGAILDYYRSLGIEAFHSNPYYYFSKNLVGDESLALDADGYAAYFIAQFNAWFEGGRKLPM
PGTLNYILRSLTAGAGLKQSVCTFGGRCLTNFLAITPDGDAWLCPKFAGFDEMRLGNVGKMAITDILSDANPAMARLIDE
RLDAIHTCEADECRFQYLCNAGCPYYSFIASGGRNIAVKDSLCTGKQLLFEYLESVVELIDPARLPEPSPLEHA
>Mature_393_residues
TSREEFLEKLAQAGTLNLIFQLTDQCALSCRYCFAKGSHPSGGLRIADDLLDAAIRSAFDTRHHQVSFEWTGGEPFFAGI
DFYRKVDRLQKKYATKPYANTIQTSGYVHDRELIAWLAGHGFRISSTIDGPPELHDFQRPVNGGGPSLGAVLATRETIIE
HQGHCGCICTVTRNSLGKEGAILDYYRSLGIEAFHSNPYYYFSKNLVGDESLALDADGYAAYFIAQFNAWFEGGRKLPMP
GTLNYILRSLTAGAGLKQSVCTFGGRCLTNFLAITPDGDAWLCPKFAGFDEMRLGNVGKMAITDILSDANPAMARLIDER
LDAIHTCEADECRFQYLCNAGCPYYSFIASGGRNIAVKDSLCTGKQLLFEYLESVVELIDPARLPEPSPLEHA

Specific function: Unknown

COG id: COG0641

COG function: function code R; Arylsulfatase regulator (Fe-S oxidoreductase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. Anaerobic sulfatase-maturating enzyme family [H]

Homologues:

Organism=Escherichia coli, GI87081923, Length=379, Percent_Identity=26.3852242744063, Blast_Score=128, Evalue=6e-31,
Organism=Escherichia coli, GI48994973, Length=387, Percent_Identity=25.3229974160207, Blast_Score=119, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 43427; Mature: 43295

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSREEFLEKLAQAGTLNLIFQLTDQCALSCRYCFAKGSHPSGGLRIADDLLDAAIRSAF
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
DTRHHQVSFEWTGGEPFFAGIDFYRKVDRLQKKYATKPYANTIQTSGYVHDRELIAWLAG
HCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEHHHHHHHHHC
HGFRISSTIDGPPELHDFQRPVNGGGPSLGAVLATRETIIEHQGHCGCICTVTRNSLGKE
CCEEEECCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC
GAILDYYRSLGIEAFHSNPYYYFSKNLVGDESLALDADGYAAYFIAQFNAWFEGGRKLPM
CCHHHHHHHCCCEEEECCCEEEEECCCCCCCCEEECCCCCEEEHHHHHHHHHHCCCCCCC
PGTLNYILRSLTAGAGLKQSVCTFGGRCLTNFLAITPDGDAWLCPKFAGFDEMRLGNVGK
CCHHHHHHHHHHCCCCCHHHHHHHCCHHHHHEEEECCCCCEEECCCCCCCCCHHCCCCCH
MAITDILSDANPAMARLIDERLDAIHTCEADECRFQYLCNAGCPYYSFIASGGRNIAVKD
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHCCCCEEEEEC
SLCTGKQLLFEYLESVVELIDPARLPEPSPLEHA
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSREEFLEKLAQAGTLNLIFQLTDQCALSCRYCFAKGSHPSGGLRIADDLLDAAIRSAF
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
DTRHHQVSFEWTGGEPFFAGIDFYRKVDRLQKKYATKPYANTIQTSGYVHDRELIAWLAG
HCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEHHHHHHHHHC
HGFRISSTIDGPPELHDFQRPVNGGGPSLGAVLATRETIIEHQGHCGCICTVTRNSLGKE
CCEEEECCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC
GAILDYYRSLGIEAFHSNPYYYFSKNLVGDESLALDADGYAAYFIAQFNAWFEGGRKLPM
CCHHHHHHHCCCEEEECCCEEEEECCCCCCCCEEECCCCCEEEHHHHHHHHHHCCCCCCC
PGTLNYILRSLTAGAGLKQSVCTFGGRCLTNFLAITPDGDAWLCPKFAGFDEMRLGNVGK
CCHHHHHHHHHHCCCCCHHHHHHHCCHHHHHEEEECCCCCEEECCCCCCCCCHHCCCCCH
MAITDILSDANPAMARLIDERLDAIHTCEADECRFQYLCNAGCPYYSFIASGGRNIAVKD
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHCCCCEEEEEC
SLCTGKQLLFEYLESVVELIDPARLPEPSPLEHA
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]