| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673592
Identifier: 21673592
GI number: 21673592
Start: 736583
End: 737176
Strand: Direct
Name: 21673592
Synonym: CT0762
Alternate gene names: NA
Gene position: 736583-737176 (Clockwise)
Preceding gene: 21673591
Following gene: 21673593
Centisome position: 34.18
GC content: 52.86
Gene sequence:
>594_bases ATGCAGCTCGATACACGCCGGTTCGCCTCTCTGGTCTCATGGATCATCAGTCCTGTCGTCGTGGCCCCGGCAGTTTATCT GCTTATTGTTCTGTATCGTTATTCGGCTACATCCAGTCATCTCGACTGGTTTCTGGTGCTGTTTCTTTCGGCCACGATTG TTCCGATGTTCCTGATTTACGGACTCAAGAAGATCGGCCGGGTTTCGGATTACAATATCACTTTCCGGGAGCAGCGATTC CTGCCGCTGCTGGTGCTGGTTGGGGTCAATCTCGTTGGCTACGAGCTGATGAAGCAGCTCGACGCGCCGCGATTTCTCTC GGCGATTCTGCTTTTCAATGCCGTCAATACGGTCTTCATCCTCTTGGTCACGCTTCAGTGGAAAATCAGCATTCATCTCT TTTCCCTGACCTCGTCTATCGCGCTGCTCGTGCTCTCCTTCGGGCTGCCCGCGCTGGTGTTGCTCTGCTTCGTGCCGCTC CTGATGTGGTCGCGCATTTATCTCAAGGCCCATAACTTTATGCAGACGCTTGTTGGCAGCATCATCGGTTTTCTGCTGAT GTACGGTGAATTCAAATGGTGGCTTGCACTGTGA
Upstream 100 bases:
>100_bases CGGCGTTCTCCTGTTTTCGCTTTCTCAGGGAAAGGATTATCTTCATTAGCGCTTGAAATGCGCCATCTGGATCATTCACC ATCATTTTGCCTGGTTTTTA
Downstream 100 bases:
>100_bases GTAAACGGCGTTACAGCGTGGTGCTGGTGACATACGGGGAGGTCGAGAAGCTTTCAGTGCGCGCGCTCTGGCCGAGTTCC CGGAAGATCATCGAGGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MQLDTRRFASLVSWIISPVVVAPAVYLLIVLYRYSATSSHLDWFLVLFLSATIVPMFLIYGLKKIGRVSDYNITFREQRF LPLLVLVGVNLVGYELMKQLDAPRFLSAILLFNAVNTVFILLVTLQWKISIHLFSLTSSIALLVLSFGLPALVLLCFVPL LMWSRIYLKAHNFMQTLVGSIIGFLLMYGEFKWWLAL
Sequences:
>Translated_197_residues MQLDTRRFASLVSWIISPVVVAPAVYLLIVLYRYSATSSHLDWFLVLFLSATIVPMFLIYGLKKIGRVSDYNITFREQRF LPLLVLVGVNLVGYELMKQLDAPRFLSAILLFNAVNTVFILLVTLQWKISIHLFSLTSSIALLVLSFGLPALVLLCFVPL LMWSRIYLKAHNFMQTLVGSIIGFLLMYGEFKWWLAL >Mature_197_residues MQLDTRRFASLVSWIISPVVVAPAVYLLIVLYRYSATSSHLDWFLVLFLSATIVPMFLIYGLKKIGRVSDYNITFREQRF LPLLVLVGVNLVGYELMKQLDAPRFLSAILLFNAVNTVFILLVTLQWKISIHLFSLTSSIALLVLSFGLPALVLLCFVPL LMWSRIYLKAHNFMQTLVGSIIGFLLMYGEFKWWLAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22539; Mature: 22539
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLDTRRFASLVSWIISPVVVAPAVYLLIVLYRYSATSSHLDWFLVLFLSATIVPMFLIY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GLKKIGRVSDYNITFREQRFLPLLVLVGVNLVGYELMKQLDAPRFLSAILLFNAVNTVFI HHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LLVTLQWKISIHLFSLTSSIALLVLSFGLPALVLLCFVPLLMWSRIYLKAHNFMQTLVGS HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIGFLLMYGEFKWWLAL HHHHHHHHHCHHHHCCC >Mature Secondary Structure MQLDTRRFASLVSWIISPVVVAPAVYLLIVLYRYSATSSHLDWFLVLFLSATIVPMFLIY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GLKKIGRVSDYNITFREQRFLPLLVLVGVNLVGYELMKQLDAPRFLSAILLFNAVNTVFI HHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LLVTLQWKISIHLFSLTSSIALLVLSFGLPALVLLCFVPLLMWSRIYLKAHNFMQTLVGS HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIGFLLMYGEFKWWLAL HHHHHHHHHCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA