| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673572
Identifier: 21673572
GI number: 21673572
Start: 720181
End: 721017
Strand: Direct
Name: 21673572
Synonym: CT0742
Alternate gene names: NA
Gene position: 720181-721017 (Clockwise)
Preceding gene: 21673571
Following gene: 21673573
Centisome position: 33.42
GC content: 55.79
Gene sequence:
>837_bases ATGAATAATCTCGAATTGTCACTGATTGTTGGCGTCGGGGCCCTGTTCGCAGGAATGCTCGGCTCGCTGACAGGACTCGG CGGCGGAGTAGTTATCGTGCCGTTGCTCACACTCGGACTCGGCATCGATCTGCGCTATGCTGTCGGAACTTCGCTGGTCG CTGTCATCGCGACGTCATCTGGCGCTGCTGCAGCCTATGTCAAGGAGGGTTTTTCGAATATTCGCATCGGCTTGTTCCTC GAAGTGGCCACCACCGTCGGCGCCCTTGTCGGCGCATTTCTTGCCGGTATGCTTGCGACCAATATCATCGCTATCATTTT CGGTCTCGTGCTGCTCTATTCGGCATACCTGTCAACCAAGGCTAAAGAGGATCACTCCGATGATGTCAACCCCGATCCGC TGGCGATAAAGTTCAAACTCAACAGCAGCTATCCCACCGAAGAAGGCGTCAAGCACTACAGCGTACACAACGTCGGTGCA GGCTTCGGCCTGATGTGGCTTGCGGGCATTCTCTCCGGTCTGCTTGGCATCGGCTCGGGCGCGGTCAAGGTGCTCGCGAT GGATCACGCCATGCGTCTGCCGTTCAAGGTTTCGGCCACAACCAGCAACTTCATGATCGGCGTGACCGCTGCCGCCAGCG CCGGCGTCTATTTTCAGCGCGGCTATATCAATGCGGGGCTGACTTTTCCAGTCATGCTTGGTATTCTTGCCGGTTCGTTT ATCGGTGCAAAGCTTTTGATGGTCGCCAAAACGAAGTGGCTGCGGCTGATTTTCGGTGTGGTGATTTTTGCGCTCGGTCT CGAGATGATTTTCAACGGCATAACCGGGAGGATCTGA
Upstream 100 bases:
>100_bases CTCCATCCGTCCTCTTTGTTTCTCTATCTTTCGCTGTTCCCGCATCTCTCATAGTTTGTCAGTTGCCCCTTGTTTTTCAT CCATCATTAGGATCAATTTC
Downstream 100 bases:
>100_bases CGATGAACGCACACCACAAACCTGAAATGAACGACCTTCGCATGACGGGCATTATCGGCAATCTTCTGCGTTTCGGCGTG CTGCTTGCCGCGTCGATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Domain Protein
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MNNLELSLIVGVGALFAGMLGSLTGLGGGVVIVPLLTLGLGIDLRYAVGTSLVAVIATSSGAAAAYVKEGFSNIRIGLFL EVATTVGALVGAFLAGMLATNIIAIIFGLVLLYSAYLSTKAKEDHSDDVNPDPLAIKFKLNSSYPTEEGVKHYSVHNVGA GFGLMWLAGILSGLLGIGSGAVKVLAMDHAMRLPFKVSATTSNFMIGVTAAASAGVYFQRGYINAGLTFPVMLGILAGSF IGAKLLMVAKTKWLRLIFGVVIFALGLEMIFNGITGRI
Sequences:
>Translated_278_residues MNNLELSLIVGVGALFAGMLGSLTGLGGGVVIVPLLTLGLGIDLRYAVGTSLVAVIATSSGAAAAYVKEGFSNIRIGLFL EVATTVGALVGAFLAGMLATNIIAIIFGLVLLYSAYLSTKAKEDHSDDVNPDPLAIKFKLNSSYPTEEGVKHYSVHNVGA GFGLMWLAGILSGLLGIGSGAVKVLAMDHAMRLPFKVSATTSNFMIGVTAAASAGVYFQRGYINAGLTFPVMLGILAGSF IGAKLLMVAKTKWLRLIFGVVIFALGLEMIFNGITGRI >Mature_278_residues MNNLELSLIVGVGALFAGMLGSLTGLGGGVVIVPLLTLGLGIDLRYAVGTSLVAVIATSSGAAAAYVKEGFSNIRIGLFL EVATTVGALVGAFLAGMLATNIIAIIFGLVLLYSAYLSTKAKEDHSDDVNPDPLAIKFKLNSSYPTEEGVKHYSVHNVGA GFGLMWLAGILSGLLGIGSGAVKVLAMDHAMRLPFKVSATTSNFMIGVTAAASAGVYFQRGYINAGLTFPVMLGILAGSF IGAKLLMVAKTKWLRLIFGVVIFALGLEMIFNGITGRI
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28749; Mature: 28749
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: PS00046 HISTONE_H2A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLELSLIVGVGALFAGMLGSLTGLGGGVVIVPLLTLGLGIDLRYAVGTSLVAVIATSS CCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEHHHHHHHHEEEEECCC GAAAAYVKEGFSNIRIGLFLEVATTVGALVGAFLAGMLATNIIAIIFGLVLLYSAYLSTK CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AKEDHSDDVNPDPLAIKFKLNSSYPTEEGVKHYSVHNVGAGFGLMWLAGILSGLLGIGSG CCCCCCCCCCCCCEEEEEEECCCCCCHHCCHHHEECCCCCCHHHHHHHHHHHHHHHCCCC AVKVLAMDHAMRLPFKVSATTSNFMIGVTAAASAGVYFQRGYINAGLTFPVMLGILAGSF CEEEEEEHHHHCCCEEEEECCCCEEEEEEHHHCCCEEEECCCCCCCCHHHHHHHHHHHHH IGAKLLMVAKTKWLRLIFGVVIFALGLEMIFNGITGRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNNLELSLIVGVGALFAGMLGSLTGLGGGVVIVPLLTLGLGIDLRYAVGTSLVAVIATSS CCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEHHHHHHHHEEEEECCC GAAAAYVKEGFSNIRIGLFLEVATTVGALVGAFLAGMLATNIIAIIFGLVLLYSAYLSTK CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AKEDHSDDVNPDPLAIKFKLNSSYPTEEGVKHYSVHNVGAGFGLMWLAGILSGLLGIGSG CCCCCCCCCCCCCEEEEEEECCCCCCHHCCHHHEECCCCCCHHHHHHHHHHHHHHHCCCC AVKVLAMDHAMRLPFKVSATTSNFMIGVTAAASAGVYFQRGYINAGLTFPVMLGILAGSF CEEEEEEHHHHCCCEEEEECCCCEEEEEEHHHCCCEEEECCCCCCCCHHHHHHHHHHHHH IGAKLLMVAKTKWLRLIFGVVIFALGLEMIFNGITGRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA