| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673534
Identifier: 21673534
GI number: 21673534
Start: 688707
End: 689453
Strand: Direct
Name: 21673534
Synonym: CT0704
Alternate gene names: NA
Gene position: 688707-689453 (Clockwise)
Preceding gene: 21673522
Following gene: 21673536
Centisome position: 31.96
GC content: 60.78
Gene sequence:
>747_bases ATGTCCGCTCTCTCGTTTCGAGGCAACTCGCCCGGCATCGAATACACCGTCAAGGTGAGCCAGCGGGCGCGCTATGCCCG CCTGAAAATGTCGCCGGTGGAGGGGTTGACGGTGGTGGTGCCGGTCGGCTTCGACAAAAAACAGGTGCCCGCGCTGGTCG AGAGCAAGAGGGAGTGGATTCTGAAGGTGCGGCGAACCTTCGACAAGCATCGCGCTGCCGCACCCGCGCAGGGCGACGCG GCGTTGCCGACGGTGATCGAGCTTGCAGGAATCGGCGAATCGTGGCGGGTCAGATATCGCAGCGAGCCACGTCAGCGCAT CACGATCACGGAAAAGGGCGAAGGCGAGCTTGAGGTTTCCGGTCCGGTCAGTGAGCACGCCATGTGCTTTGCGGCGCTCG AACAGTGGCTGAAACATCGCGCGAAGCTCAAGCTCGGGGCGCAGCTCATGCGGCTGGCGTCGATTAACGGCTTCAAGGTT TCTGGAGTGTCGGTGAAAAAGCAGAAAAGCCGGTGGGGGAGTTGTTCGTCACGGGGCAACATCAATCTCAATCTCAAGCT GATCTTCTTGCCGCCGCTGCTGGTGCGCTACATCATGATTCACGAGCTGTGCCACACGCTGCATATGAATCACTCCGCCC GCTACTGGGAGACGGTTGCGCGGTTCGATCCGGACTGCGTCGTCCATGATCGCGAGATGAAACATGCGTGGCGCTTCGTG CCTGCGTGGTTTTCCAACGCTCGCTGA
Upstream 100 bases:
>100_bases GCTGGCGGAGCGCCGGGAAGGGGATATCCGCTTTTTTTATCTTGCGCGGCTGGTTATACTCCGGGAGCATTTCCGCAACG ATCATTCTGTTCCGCCCAGC
Downstream 100 bases:
>100_bases CGGCGGTCGCGCGTTTCAGCGCTTTTCGAAGCGCTGGTTCGGCATCGATTTGATGCCCGAAAAGATGAGCGATGCGACGA GCAGTATCACCCCCCAGACA
Product: zinc protease, putative
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MSALSFRGNSPGIEYTVKVSQRARYARLKMSPVEGLTVVVPVGFDKKQVPALVESKREWILKVRRTFDKHRAAAPAQGDA ALPTVIELAGIGESWRVRYRSEPRQRITITEKGEGELEVSGPVSEHAMCFAALEQWLKHRAKLKLGAQLMRLASINGFKV SGVSVKKQKSRWGSCSSRGNINLNLKLIFLPPLLVRYIMIHELCHTLHMNHSARYWETVARFDPDCVVHDREMKHAWRFV PAWFSNAR
Sequences:
>Translated_248_residues MSALSFRGNSPGIEYTVKVSQRARYARLKMSPVEGLTVVVPVGFDKKQVPALVESKREWILKVRRTFDKHRAAAPAQGDA ALPTVIELAGIGESWRVRYRSEPRQRITITEKGEGELEVSGPVSEHAMCFAALEQWLKHRAKLKLGAQLMRLASINGFKV SGVSVKKQKSRWGSCSSRGNINLNLKLIFLPPLLVRYIMIHELCHTLHMNHSARYWETVARFDPDCVVHDREMKHAWRFV PAWFSNAR >Mature_247_residues SALSFRGNSPGIEYTVKVSQRARYARLKMSPVEGLTVVVPVGFDKKQVPALVESKREWILKVRRTFDKHRAAAPAQGDAA LPTVIELAGIGESWRVRYRSEPRQRITITEKGEGELEVSGPVSEHAMCFAALEQWLKHRAKLKLGAQLMRLASINGFKVS GVSVKKQKSRWGSCSSRGNINLNLKLIFLPPLLVRYIMIHELCHTLHMNHSARYWETVARFDPDCVVHDREMKHAWRFVP AWFSNAR
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28214; Mature: 28083
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALSFRGNSPGIEYTVKVSQRARYARLKMSPVEGLTVVVPVGFDKKQVPALVESKREWI CCCCCCCCCCCCEEEEEEECCCCHHHHEECCCCCCEEEEEECCCCHHHCCHHHHHHHHHH LKVRRTFDKHRAAAPAQGDAALPTVIELAGIGESWRVRYRSEPRQRITITEKGEGELEVS HHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHEEEECCCCCEEEEEEECCCCEEEEC GPVSEHAMCFAALEQWLKHRAKLKLGAQLMRLASINGFKVSGVSVKKQKSRWGSCSSRGN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEHHHHHCCCCCCCCCC INLNLKLIFLPPLLVRYIMIHELCHTLHMNHSARYWETVARFDPDCVVHDREMKHAWRFV EEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHH PAWFSNAR HHHHCCCC >Mature Secondary Structure SALSFRGNSPGIEYTVKVSQRARYARLKMSPVEGLTVVVPVGFDKKQVPALVESKREWI CCCCCCCCCCCEEEEEEECCCCHHHHEECCCCCCEEEEEECCCCHHHCCHHHHHHHHHH LKVRRTFDKHRAAAPAQGDAALPTVIELAGIGESWRVRYRSEPRQRITITEKGEGELEVS HHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHEEEECCCCCEEEEEEECCCCEEEEC GPVSEHAMCFAALEQWLKHRAKLKLGAQLMRLASINGFKVSGVSVKKQKSRWGSCSSRGN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEHHHHHCCCCCCCCCC INLNLKLIFLPPLLVRYIMIHELCHTLHMNHSARYWETVARFDPDCVVHDREMKHAWRFV EEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHH PAWFSNAR HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA