Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21673509

Identifier: 21673509

GI number: 21673509

Start: 670112

End: 671140

Strand: Direct

Name: 21673509

Synonym: CT0678

Alternate gene names: NA

Gene position: 670112-671140 (Clockwise)

Preceding gene: 21673508

Following gene: 21673510

Centisome position: 31.1

GC content: 60.93

Gene sequence:

>1029_bases
GTGACGCTGGCGTTGGGACGATTGGACAGCATCACCCTGTTGCTTCCCGACCCCGAACTGTTTCTCTATTCCTACGTGCG
TCGCGAGGCGGTGCTCTCTTCGCAGATTGAAGGCACCCAATCCACCCTGACCCAGTTGATGCTGTTTGAGCTGGAGGAGA
GTCCGGGGGTACCTTTCGATGATGTGGTGGAGGTCTCCAACTACGTTGCGGCACTCGACCATGGCGTTGCGCGACTCAAG
GAGGGCTTCCCGCTCTCCAATCGTCTGATTCGGGAAATGCACACCGTGCTCCTCTTCCGTGGGCGAGGGAGCAACAAGGG
CCCGGGGGAATTCCGCCGCTCCCAAAACTGGATCGGCGGCACGCGGCCCGGAAATGCCCTTTTTGTTCCGCCGCCCCCGC
ACCTCGTGCCGCAGTGCATGGCGGATCTTGAGCGCTTCTTGCACGACGAGAACAACCCGTACCCCTCGGTGCTCAAGGCC
GCGCTGGCCCACGTGCAGTTCGAGACCATCCATCCGTTCCTCGACGGAAACGGGAGGATCGGGCGGTTACTGATCGCGTT
CATTCTGCATCACGACGGGATTCTTTCCCGTCCGCTGCTCTACCTCAGTCTCTACTTCAAGCGGCACCGTGAAACCTATT
ACCGCTTGCTCGATCGGGTGCGGACCGAAGGCGATTGGGAAGCCTGGACCGACTTTTTCCTCGAAGGCGTGCGGGAAACA
GCGGGTAACGCGGTGGACACGGCCAGGAGGCTCATTGCGCTCTTCGAAGCGGATCAGCAGAAGATTCAATCCCTGGGACG
ATCGGCCTCCAGCACCTTGCAGGTGTTTCAGGCGTTCAAGGAGCGCCCCCTCCTTACCGTGGGCCGCATTTCGGAGCGCA
CCGGATTGTCCTTTCCCGCTGCGAATCAGGCTGTTGGGCGGATGGAAAAAAAGCTTGGCATCGTGCGCGAGATCACCGGC
CGCCGCCGCGAGCGTGCCTATGCCTACGATCAGTACGTGGCGATCCTGAACGAAGGGGCGGAGGAATGA

Upstream 100 bases:

>100_bases
CTCCATGAGCGGTGAAAACGTTCGGGCCTTCGTACCGGCTCCACTACCACCCGATCCGCCGCTTGAGGACACCCCCGCGC
GGCGCAAGCTGCTCGAGGAG

Downstream 100 bases:

>100_bases
GGAGGGAGTTGGGTATGGGGAGTGAGTGGCTGGGTGAAGAATGCGAGATCGTGATGGGTCAGTCGCCGCCCAGCGAAACT
TGCAACACAGTTGGAATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MTLALGRLDSITLLLPDPELFLYSYVRREAVLSSQIEGTQSTLTQLMLFELEESPGVPFDDVVEVSNYVAALDHGVARLK
EGFPLSNRLIREMHTVLLFRGRGSNKGPGEFRRSQNWIGGTRPGNALFVPPPPHLVPQCMADLERFLHDENNPYPSVLKA
ALAHVQFETIHPFLDGNGRIGRLLIAFILHHDGILSRPLLYLSLYFKRHRETYYRLLDRVRTEGDWEAWTDFFLEGVRET
AGNAVDTARRLIALFEADQQKIQSLGRSASSTLQVFQAFKERPLLTVGRISERTGLSFPAANQAVGRMEKKLGIVREITG
RRRERAYAYDQYVAILNEGAEE

Sequences:

>Translated_342_residues
MTLALGRLDSITLLLPDPELFLYSYVRREAVLSSQIEGTQSTLTQLMLFELEESPGVPFDDVVEVSNYVAALDHGVARLK
EGFPLSNRLIREMHTVLLFRGRGSNKGPGEFRRSQNWIGGTRPGNALFVPPPPHLVPQCMADLERFLHDENNPYPSVLKA
ALAHVQFETIHPFLDGNGRIGRLLIAFILHHDGILSRPLLYLSLYFKRHRETYYRLLDRVRTEGDWEAWTDFFLEGVRET
AGNAVDTARRLIALFEADQQKIQSLGRSASSTLQVFQAFKERPLLTVGRISERTGLSFPAANQAVGRMEKKLGIVREITG
RRRERAYAYDQYVAILNEGAEE
>Mature_341_residues
TLALGRLDSITLLLPDPELFLYSYVRREAVLSSQIEGTQSTLTQLMLFELEESPGVPFDDVVEVSNYVAALDHGVARLKE
GFPLSNRLIREMHTVLLFRGRGSNKGPGEFRRSQNWIGGTRPGNALFVPPPPHLVPQCMADLERFLHDENNPYPSVLKAA
LAHVQFETIHPFLDGNGRIGRLLIAFILHHDGILSRPLLYLSLYFKRHRETYYRLLDRVRTEGDWEAWTDFFLEGVRETA
GNAVDTARRLIALFEADQQKIQSLGRSASSTLQVFQAFKERPLLTVGRISERTGLSFPAANQAVGRMEKKLGIVREITGR
RRERAYAYDQYVAILNEGAEE

Specific function: Unknown

COG id: COG3177

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 fido domain [H]

Homologues:

Organism=Drosophila melanogaster, GI24582217, Length=209, Percent_Identity=31.5789473684211, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003812 [H]

Pfam domain/function: PF02661 Fic [H]

EC number: NA

Molecular weight: Translated: 38765; Mature: 38634

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLALGRLDSITLLLPDPELFLYSYVRREAVLSSQIEGTQSTLTQLMLFELEESPGVPFD
CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHH
DVVEVSNYVAALDHGVARLKEGFPLSNRLIREMHTVLLFRGRGSNKGPGEFRRSQNWIGG
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCHHHHHCCCCCCC
TRPGNALFVPPPPHLVPQCMADLERFLHDENNPYPSVLKAALAHVQFETIHPFLDGNGRI
CCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCH
GRLLIAFILHHDGILSRPLLYLSLYFKRHRETYYRLLDRVRTEGDWEAWTDFFLEGVRET
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AGNAVDTARRLIALFEADQQKIQSLGRSASSTLQVFQAFKERPLLTVGRISERTGLSFPA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCHHHCCCCCCC
ANQAVGRMEKKLGIVREITGRRRERAYAYDQYVAILNEGAEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TLALGRLDSITLLLPDPELFLYSYVRREAVLSSQIEGTQSTLTQLMLFELEESPGVPFD
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHH
DVVEVSNYVAALDHGVARLKEGFPLSNRLIREMHTVLLFRGRGSNKGPGEFRRSQNWIGG
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCHHHHHCCCCCCC
TRPGNALFVPPPPHLVPQCMADLERFLHDENNPYPSVLKAALAHVQFETIHPFLDGNGRI
CCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCH
GRLLIAFILHHDGILSRPLLYLSLYFKRHRETYYRLLDRVRTEGDWEAWTDFFLEGVRET
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AGNAVDTARRLIALFEADQQKIQSLGRSASSTLQVFQAFKERPLLTVGRISERTGLSFPA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCHHHCCCCCCC
ANQAVGRMEKKLGIVREITGRRRERAYAYDQYVAILNEGAEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]