| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673509
Identifier: 21673509
GI number: 21673509
Start: 670112
End: 671140
Strand: Direct
Name: 21673509
Synonym: CT0678
Alternate gene names: NA
Gene position: 670112-671140 (Clockwise)
Preceding gene: 21673508
Following gene: 21673510
Centisome position: 31.1
GC content: 60.93
Gene sequence:
>1029_bases GTGACGCTGGCGTTGGGACGATTGGACAGCATCACCCTGTTGCTTCCCGACCCCGAACTGTTTCTCTATTCCTACGTGCG TCGCGAGGCGGTGCTCTCTTCGCAGATTGAAGGCACCCAATCCACCCTGACCCAGTTGATGCTGTTTGAGCTGGAGGAGA GTCCGGGGGTACCTTTCGATGATGTGGTGGAGGTCTCCAACTACGTTGCGGCACTCGACCATGGCGTTGCGCGACTCAAG GAGGGCTTCCCGCTCTCCAATCGTCTGATTCGGGAAATGCACACCGTGCTCCTCTTCCGTGGGCGAGGGAGCAACAAGGG CCCGGGGGAATTCCGCCGCTCCCAAAACTGGATCGGCGGCACGCGGCCCGGAAATGCCCTTTTTGTTCCGCCGCCCCCGC ACCTCGTGCCGCAGTGCATGGCGGATCTTGAGCGCTTCTTGCACGACGAGAACAACCCGTACCCCTCGGTGCTCAAGGCC GCGCTGGCCCACGTGCAGTTCGAGACCATCCATCCGTTCCTCGACGGAAACGGGAGGATCGGGCGGTTACTGATCGCGTT CATTCTGCATCACGACGGGATTCTTTCCCGTCCGCTGCTCTACCTCAGTCTCTACTTCAAGCGGCACCGTGAAACCTATT ACCGCTTGCTCGATCGGGTGCGGACCGAAGGCGATTGGGAAGCCTGGACCGACTTTTTCCTCGAAGGCGTGCGGGAAACA GCGGGTAACGCGGTGGACACGGCCAGGAGGCTCATTGCGCTCTTCGAAGCGGATCAGCAGAAGATTCAATCCCTGGGACG ATCGGCCTCCAGCACCTTGCAGGTGTTTCAGGCGTTCAAGGAGCGCCCCCTCCTTACCGTGGGCCGCATTTCGGAGCGCA CCGGATTGTCCTTTCCCGCTGCGAATCAGGCTGTTGGGCGGATGGAAAAAAAGCTTGGCATCGTGCGCGAGATCACCGGC CGCCGCCGCGAGCGTGCCTATGCCTACGATCAGTACGTGGCGATCCTGAACGAAGGGGCGGAGGAATGA
Upstream 100 bases:
>100_bases CTCCATGAGCGGTGAAAACGTTCGGGCCTTCGTACCGGCTCCACTACCACCCGATCCGCCGCTTGAGGACACCCCCGCGC GGCGCAAGCTGCTCGAGGAG
Downstream 100 bases:
>100_bases GGAGGGAGTTGGGTATGGGGAGTGAGTGGCTGGGTGAAGAATGCGAGATCGTGATGGGTCAGTCGCCGCCCAGCGAAACT TGCAACACAGTTGGAATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MTLALGRLDSITLLLPDPELFLYSYVRREAVLSSQIEGTQSTLTQLMLFELEESPGVPFDDVVEVSNYVAALDHGVARLK EGFPLSNRLIREMHTVLLFRGRGSNKGPGEFRRSQNWIGGTRPGNALFVPPPPHLVPQCMADLERFLHDENNPYPSVLKA ALAHVQFETIHPFLDGNGRIGRLLIAFILHHDGILSRPLLYLSLYFKRHRETYYRLLDRVRTEGDWEAWTDFFLEGVRET AGNAVDTARRLIALFEADQQKIQSLGRSASSTLQVFQAFKERPLLTVGRISERTGLSFPAANQAVGRMEKKLGIVREITG RRRERAYAYDQYVAILNEGAEE
Sequences:
>Translated_342_residues MTLALGRLDSITLLLPDPELFLYSYVRREAVLSSQIEGTQSTLTQLMLFELEESPGVPFDDVVEVSNYVAALDHGVARLK EGFPLSNRLIREMHTVLLFRGRGSNKGPGEFRRSQNWIGGTRPGNALFVPPPPHLVPQCMADLERFLHDENNPYPSVLKA ALAHVQFETIHPFLDGNGRIGRLLIAFILHHDGILSRPLLYLSLYFKRHRETYYRLLDRVRTEGDWEAWTDFFLEGVRET AGNAVDTARRLIALFEADQQKIQSLGRSASSTLQVFQAFKERPLLTVGRISERTGLSFPAANQAVGRMEKKLGIVREITG RRRERAYAYDQYVAILNEGAEE >Mature_341_residues TLALGRLDSITLLLPDPELFLYSYVRREAVLSSQIEGTQSTLTQLMLFELEESPGVPFDDVVEVSNYVAALDHGVARLKE GFPLSNRLIREMHTVLLFRGRGSNKGPGEFRRSQNWIGGTRPGNALFVPPPPHLVPQCMADLERFLHDENNPYPSVLKAA LAHVQFETIHPFLDGNGRIGRLLIAFILHHDGILSRPLLYLSLYFKRHRETYYRLLDRVRTEGDWEAWTDFFLEGVRETA GNAVDTARRLIALFEADQQKIQSLGRSASSTLQVFQAFKERPLLTVGRISERTGLSFPAANQAVGRMEKKLGIVREITGR RRERAYAYDQYVAILNEGAEE
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 fido domain [H]
Homologues:
Organism=Drosophila melanogaster, GI24582217, Length=209, Percent_Identity=31.5789473684211, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003812 [H]
Pfam domain/function: PF02661 Fic [H]
EC number: NA
Molecular weight: Translated: 38765; Mature: 38634
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLALGRLDSITLLLPDPELFLYSYVRREAVLSSQIEGTQSTLTQLMLFELEESPGVPFD CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHH DVVEVSNYVAALDHGVARLKEGFPLSNRLIREMHTVLLFRGRGSNKGPGEFRRSQNWIGG HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCHHHHHCCCCCCC TRPGNALFVPPPPHLVPQCMADLERFLHDENNPYPSVLKAALAHVQFETIHPFLDGNGRI CCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCH GRLLIAFILHHDGILSRPLLYLSLYFKRHRETYYRLLDRVRTEGDWEAWTDFFLEGVRET HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AGNAVDTARRLIALFEADQQKIQSLGRSASSTLQVFQAFKERPLLTVGRISERTGLSFPA CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCHHHCCCCCCC ANQAVGRMEKKLGIVREITGRRRERAYAYDQYVAILNEGAEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TLALGRLDSITLLLPDPELFLYSYVRREAVLSSQIEGTQSTLTQLMLFELEESPGVPFD CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHH DVVEVSNYVAALDHGVARLKEGFPLSNRLIREMHTVLLFRGRGSNKGPGEFRRSQNWIGG HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCHHHHHCCCCCCC TRPGNALFVPPPPHLVPQCMADLERFLHDENNPYPSVLKAALAHVQFETIHPFLDGNGRI CCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCH GRLLIAFILHHDGILSRPLLYLSLYFKRHRETYYRLLDRVRTEGDWEAWTDFFLEGVRET HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AGNAVDTARRLIALFEADQQKIQSLGRSASSTLQVFQAFKERPLLTVGRISERTGLSFPA CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCHHHCCCCCCC ANQAVGRMEKKLGIVREITGRRRERAYAYDQYVAILNEGAEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]