| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673507
Identifier: 21673507
GI number: 21673507
Start: 667961
End: 669658
Strand: Direct
Name: 21673507
Synonym: CT0676
Alternate gene names: NA
Gene position: 667961-669658 (Clockwise)
Preceding gene: 21673506
Following gene: 21673508
Centisome position: 31.0
GC content: 66.25
Gene sequence:
>1698_bases ATGAACCCAGAGGCGCTACGCAAGCTGATCGACACTGGGGAAACCCAAGCCGTCGAATTCAAAGGCGAAGAACGTACGCC GCTGAACGATCGCACGCTGGTTGAGGCAGTGGTGTGCCTCGCCAATCGCAGCGGCAGCGACACCGGCTGGTTGCTCGTCG GTGTCGAGGACGATGGCCGTATCACCGGGGCCCGGCAGCGCCATGACCATGGCACCGATCCCGACCGATTGGCCGCGCTC ATCGCTGCGCGCACGCGGCCGAGCCTGTCGGTACGGGTGTACACCGTCACGCTCAATGGTGTTCCGGTGCTTGCCATCGA AGTGCCGCCCCAGCGCGTGCCTGTGGCCACGAGCGAAGGCGTCTTCCTGCGTCGCGCACTCGGTGGTGACGGCCGCCCGG CCTGTTTGCCGATGGATGCGGCCGCAATGCAGTCATTGCAGGCCGACCGTGGTCTGCTCGACCCCTCGGCACAGGTCGTC GCTGCGGCAGGTTGGCATGACCTCGACCCGCTGGAGTTCGAGCGCTTCCGCCGCAGTGTCCGCGAGCGCCGCGGGCGTAG TGACGAGTCGTTGCTCGATCTGCCCGATCTGGAGCTGGCCAAGGCGCTCGGTGTCGTCGATGCCAACGGCCAGGTGCGCG GTGTGCGGCTCGCGGCGCTCCTGCTGTTCGGGAAAGAAGACGCCTTACGCCGCTTGGTGCCCACACATGAAGTCGCATTC CAGGCGCTGCGCGGGCTGGAGGTCGAAACCAACGACTTCTTCCGTTGGCCGCTGCTGCGCGTGATGGAAGAGATCGAGGT CCGCATCCGCGCACGCAACCGCGAACGGGAACTGATGGTGGGGCTGTTGCGTGTCGGCGTTCCCGACTACGCGGAGCGCG CCCTGCGTGAAGCGCTGGCCAACGCCCTCATCCACCGCGACTACCAGCGTTTGGGCGCCGTGCACTTCCAGTGGCACGCC GACCATATCGAGATCAGCAATCCCGGCGGACTGCCGGAGGGTGTGCGCCTTGACAACCTGCTCGTCACCGCGCCGCGCCC GCGCAACCCGCTGCTGGCCGATGCTTTCAAGCGCGCCGGCATCGTCGAGCGCACCGCGCGCGGTATCGACACCATCTTCT ACGAACAGTTGCGCAACGGCCGCCCGGCGCCCTCCTATGCCCGCAGCGACGCCACGACGGTTGTCGTTGTCATCCCGGGT GGCGAAGCGAACCTCGATTTCGTACGCCTCCTCGTCACCGAAGCGCAAAGCGGCCGGGTACTGGGGCTGGATGAACTGCT CATCCTCAACGCCCTGTGGCAGGAGCGTACGCTCGCCACGGACGCCGCCGCTCGCCTCATCCAAAAGCCCGAAGCAGACG CCCGGGCAACCTTCCGTCATCTCGTGGAGGCTGGGCTTGTCGAGGAGCGCGGCCAAAAGAAAGGCCGCACCTGGCACCTT TCCGCCGCCGCCTACCGCGCCCTGGGCGACCGGGCCGCGTACGTGCGCCAGCACGGCTTCGAGCCGCTGCAACAGGAGCA GATGGTGTTGCAATACGTCCGGAAGCATGGCTCCATCAGCCGGGGCGAGGCGGCTGACCTGTGCCGTCTCGGCCCGATGC AAGCATACCGATTGCTCAAGCGGCTTGAGACAGAGGGCAAGATAGCACGGACTGGAGGCTCTACAAAGGGTGTCCGATAT GCCATGGCGAGCAAATAA
Upstream 100 bases:
>100_bases GGCTGGCGGCGCAGTGGCGGCAGCAGCGGGACGAGGCGGCGAAGCTCGATGCGGCGATTGAGGCGAACCTCAAAGAACTG GGTTTCTGGGAGTGACTTCG
Downstream 100 bases:
>100_bases TCGCTCGCGCGCAATTCATAATTGCACGCGAGCAAATAATACGACGGAAGCAGCCGCCATAATTGAACGGTCGCCAAATA AGGAGCCTCTTGTGAGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: ATP-Dependent DNA Helicase RecG-Related Protein; AAA-4 Family Protein
Number of amino acids: Translated: 565; Mature: 565
Protein sequence:
>565_residues MNPEALRKLIDTGETQAVEFKGEERTPLNDRTLVEAVVCLANRSGSDTGWLLVGVEDDGRITGARQRHDHGTDPDRLAAL IAARTRPSLSVRVYTVTLNGVPVLAIEVPPQRVPVATSEGVFLRRALGGDGRPACLPMDAAAMQSLQADRGLLDPSAQVV AAAGWHDLDPLEFERFRRSVRERRGRSDESLLDLPDLELAKALGVVDANGQVRGVRLAALLLFGKEDALRRLVPTHEVAF QALRGLEVETNDFFRWPLLRVMEEIEVRIRARNRERELMVGLLRVGVPDYAERALREALANALIHRDYQRLGAVHFQWHA DHIEISNPGGLPEGVRLDNLLVTAPRPRNPLLADAFKRAGIVERTARGIDTIFYEQLRNGRPAPSYARSDATTVVVVIPG GEANLDFVRLLVTEAQSGRVLGLDELLILNALWQERTLATDAAARLIQKPEADARATFRHLVEAGLVEERGQKKGRTWHL SAAAYRALGDRAAYVRQHGFEPLQQEQMVLQYVRKHGSISRGEAADLCRLGPMQAYRLLKRLETEGKIARTGGSTKGVRY AMASK
Sequences:
>Translated_565_residues MNPEALRKLIDTGETQAVEFKGEERTPLNDRTLVEAVVCLANRSGSDTGWLLVGVEDDGRITGARQRHDHGTDPDRLAAL IAARTRPSLSVRVYTVTLNGVPVLAIEVPPQRVPVATSEGVFLRRALGGDGRPACLPMDAAAMQSLQADRGLLDPSAQVV AAAGWHDLDPLEFERFRRSVRERRGRSDESLLDLPDLELAKALGVVDANGQVRGVRLAALLLFGKEDALRRLVPTHEVAF QALRGLEVETNDFFRWPLLRVMEEIEVRIRARNRERELMVGLLRVGVPDYAERALREALANALIHRDYQRLGAVHFQWHA DHIEISNPGGLPEGVRLDNLLVTAPRPRNPLLADAFKRAGIVERTARGIDTIFYEQLRNGRPAPSYARSDATTVVVVIPG GEANLDFVRLLVTEAQSGRVLGLDELLILNALWQERTLATDAAARLIQKPEADARATFRHLVEAGLVEERGQKKGRTWHL SAAAYRALGDRAAYVRQHGFEPLQQEQMVLQYVRKHGSISRGEAADLCRLGPMQAYRLLKRLETEGKIARTGGSTKGVRY AMASK >Mature_565_residues MNPEALRKLIDTGETQAVEFKGEERTPLNDRTLVEAVVCLANRSGSDTGWLLVGVEDDGRITGARQRHDHGTDPDRLAAL IAARTRPSLSVRVYTVTLNGVPVLAIEVPPQRVPVATSEGVFLRRALGGDGRPACLPMDAAAMQSLQADRGLLDPSAQVV AAAGWHDLDPLEFERFRRSVRERRGRSDESLLDLPDLELAKALGVVDANGQVRGVRLAALLLFGKEDALRRLVPTHEVAF QALRGLEVETNDFFRWPLLRVMEEIEVRIRARNRERELMVGLLRVGVPDYAERALREALANALIHRDYQRLGAVHFQWHA DHIEISNPGGLPEGVRLDNLLVTAPRPRNPLLADAFKRAGIVERTARGIDTIFYEQLRNGRPAPSYARSDATTVVVVIPG GEANLDFVRLLVTEAQSGRVLGLDELLILNALWQERTLATDAAARLIQKPEADARATFRHLVEAGLVEERGQKKGRTWHL SAAAYRALGDRAAYVRQHGFEPLQQEQMVLQYVRKHGSISRGEAADLCRLGPMQAYRLLKRLETEGKIARTGGSTKGVRY AMASK
Specific function: Unknown
COG id: COG2865
COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62566; Mature: 62566
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPEALRKLIDTGETQAVEFKGEERTPLNDRTLVEAVVCLANRSGSDTGWLLVGVEDDGR CCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC ITGARQRHDHGTDPDRLAALIAARTRPSLSVRVYTVTLNGVPVLAIEVPPQRVPVATSEG CCCCHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCC VFLRRALGGDGRPACLPMDAAAMQSLQADRGLLDPSAQVVAAAGWHDLDPLEFERFRRSV CEEEHHHCCCCCCCEECCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHH RERRGRSDESLLDLPDLELAKALGVVDANGQVRGVRLAALLLFGKEDALRRLVPTHEVAF HHHCCCCCCCCCCCCCHHHHHHHCEECCCCCCCHHEEEHHHHCCCHHHHHHHCCHHHHHH QALRGLEVETNDFFRWPLLRVMEEIEVRIRARNRERELMVGLLRVGVPDYAERALREALA HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHH NALIHRDYQRLGAVHFQWHADHIEISNPGGLPEGVRLDNLLVTAPRPRNPLLADAFKRAG HHHHHHHHHHHCCEEEEEECCEEEECCCCCCCCCCEECCEEEECCCCCCCHHHHHHHHCC IVERTARGIDTIFYEQLRNGRPAPSYARSDATTVVVVIPGGEANLDFVRLLVTEAQSGRV HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCE LGLDELLILNALWQERTLATDAAARLIQKPEADARATFRHLVEAGLVEERGQKKGRTWHL ECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE SAAAYRALGDRAAYVRQHGFEPLQQEQMVLQYVRKHGSISRGEAADLCRLGPMQAYRLLK HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHH RLETEGKIARTGGSTKGVRYAMASK HHCCCCCEEECCCCCCCEEEECCCC >Mature Secondary Structure MNPEALRKLIDTGETQAVEFKGEERTPLNDRTLVEAVVCLANRSGSDTGWLLVGVEDDGR CCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC ITGARQRHDHGTDPDRLAALIAARTRPSLSVRVYTVTLNGVPVLAIEVPPQRVPVATSEG CCCCHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCC VFLRRALGGDGRPACLPMDAAAMQSLQADRGLLDPSAQVVAAAGWHDLDPLEFERFRRSV CEEEHHHCCCCCCCEECCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHH RERRGRSDESLLDLPDLELAKALGVVDANGQVRGVRLAALLLFGKEDALRRLVPTHEVAF HHHCCCCCCCCCCCCCHHHHHHHCEECCCCCCCHHEEEHHHHCCCHHHHHHHCCHHHHHH QALRGLEVETNDFFRWPLLRVMEEIEVRIRARNRERELMVGLLRVGVPDYAERALREALA HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHH NALIHRDYQRLGAVHFQWHADHIEISNPGGLPEGVRLDNLLVTAPRPRNPLLADAFKRAG HHHHHHHHHHHCCEEEEEECCEEEECCCCCCCCCCEECCEEEECCCCCCCHHHHHHHHCC IVERTARGIDTIFYEQLRNGRPAPSYARSDATTVVVVIPGGEANLDFVRLLVTEAQSGRV HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCE LGLDELLILNALWQERTLATDAAARLIQKPEADARATFRHLVEAGLVEERGQKKGRTWHL ECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE SAAAYRALGDRAAYVRQHGFEPLQQEQMVLQYVRKHGSISRGEAADLCRLGPMQAYRLLK HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHH RLETEGKIARTGGSTKGVRYAMASK HHCCCCCEEECCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA