Click here to switch to the map view.

The map label for this gene is 21673464

Identifier: 21673464

GI number: 21673464

Start: 632305

End: 633738

Strand: Direct

Name: 21673464

Synonym: CT0632

Alternate gene names: NA

Gene position: 632305-633738 (Clockwise)

Preceding gene: 21673461

Following gene: 21673465

Centisome position: 29.34

GC content: 54.95

Gene sequence:

>1434_bases
ATGGGGGTCGTGATGTTTTTCATTCCATCGTACTTCAGCTCGAATTTTTATCCTCTCGCCGCCGCTTTTCTGTTTGCCGT
TGTCGGACTGGTGAGCCTCAAGGCCGGGATTCTGCAATCGTTGCACGGCGAGCCGGTCGTAACGCAGGAGGGGGAGAGGG
TCATCAGTTACGGGCCGGTGCTTTTTCCGTTGGTATTTTTCTTGCAGGCACTGTTTCTGTGGGGTGAGCATGTCTGGATT
CTCCAAATCTCAATGCTGGTGCTGGGTATTGGCGATGCGCTGGCTGCACTGGTGGGGACGGCAGCCGGTGGACGGCATAT
CGAGAACCTCACCAAAAGCCGGAAGAGCATTGAGGGGTCGATGGCCATGTTCATTTCCAGCCTTGTCATTCTTTCTGTAT
CAATCTTTGTTTTCCGGGACGCCTTTACCGGGGGGCTCGTTGGACAGCCGATCTGGAAGCTGCTTGCCCTGGCATTGCTT
CTGGCGCTGCTGGTCACGGCTGTTGAAGCGCTGCTTTCGTGGGGTCTCGACAATCTTTTCATCCCGCTTGCGATTGCCTA
TGTGCTTTATGTGGTCGATGTCAACAGTATGGTGACGATTGACGGCTTACTTCTTGGCGGGCTTTTTGCACTTTTCATTG
CGATCTTTTCGATCAAGGTCAAGTTTCTCAACAACAGCGGCGCCACGGCGACTTTTCTGCTCGGAACGACCATTTTCGGC
GTTGGCGGCATGGTCTGGACCGTGCCGATGCTGACCTTCTATCTGCTTTCCTCCATTCTCTCCAAGCTCGGTCACAAGCG
GAAGGCGAAGTTCGACCTGGTGTTCGAGAAGGGATCCCAGCGCGATGCCGGTCAAGTGTACGCCAATGGCGGCGTGGCAT
GGATCATGATGGTGATCTACTCGCTGACCGGCGATCCCTACATTTTCTTTGCCTATCTCGGCACGCTCGCCGCCGTGCAG
GCCGATACCTGGGCGACCGAAATCGGCACGATGTGGCCCAATGCCAAAGCGCGCCTCATTACCACCTTCAAGGATGTGCC
GGTTGGAACCTCCGGTGGCGTCTCCATTCCCGGCACGTTGGCATCGTTTCTCGGTTCGCTGCTCATCTGTTCAAGCGCCG
TTCTGATGAATGTGTCATGGATCGATCAGGTTGGCATCGTGACGTCGCTTCTGGTGATTGGCGTTTCCGGACTTTTCGCC
AGCCTCGTGGACAGCTTTTTTGGCGCGACGGTGCAGGCTCAGTATTACGATCCCATCCGCCAGAAGGTGACGGAACGGAC
GCACAGCATCGCTTCCGACGGCAGTCGTGTCGCCAACGAACTGCTCAAGGGATATGATTTTGTAAACAATGATCTGGTCA
ATACATTGTGTGCAATATCGGGTTCCGCTGTCGCCTACCTGGTTGTCCGGAATCTGGTCTCTTTATCATTGTGA

Upstream 100 bases:

>100_bases
TCTTTTGACTCTCGTCGGATTTTTTTTGGTGCTTGGTGAGCTGTTGACCAGAAAATTCAGTGTTACTCCGCTTGTCGTCC
GGAAGGTGATTCACCTGTGC

Downstream 100 bases:

>100_bases
ACCTATCAGAGGGAATCGAACATGCTTGAACATGCGAGTGGCGGAATCGTCTCGATGATTGCCGGCTCCGGTCCGGTGGT
GGTGATGGTGCTGCTGGTGT

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MGVVMFFIPSYFSSNFYPLAAAFLFAVVGLVSLKAGILQSLHGEPVVTQEGERVISYGPVLFPLVFFLQALFLWGEHVWI
LQISMLVLGIGDALAALVGTAAGGRHIENLTKSRKSIEGSMAMFISSLVILSVSIFVFRDAFTGGLVGQPIWKLLALALL
LALLVTAVEALLSWGLDNLFIPLAIAYVLYVVDVNSMVTIDGLLLGGLFALFIAIFSIKVKFLNNSGATATFLLGTTIFG
VGGMVWTVPMLTFYLLSSILSKLGHKRKAKFDLVFEKGSQRDAGQVYANGGVAWIMMVIYSLTGDPYIFFAYLGTLAAVQ
ADTWATEIGTMWPNAKARLITTFKDVPVGTSGGVSIPGTLASFLGSLLICSSAVLMNVSWIDQVGIVTSLLVIGVSGLFA
SLVDSFFGATVQAQYYDPIRQKVTERTHSIASDGSRVANELLKGYDFVNNDLVNTLCAISGSAVAYLVVRNLVSLSL

Sequences:

>Translated_477_residues
MGVVMFFIPSYFSSNFYPLAAAFLFAVVGLVSLKAGILQSLHGEPVVTQEGERVISYGPVLFPLVFFLQALFLWGEHVWI
LQISMLVLGIGDALAALVGTAAGGRHIENLTKSRKSIEGSMAMFISSLVILSVSIFVFRDAFTGGLVGQPIWKLLALALL
LALLVTAVEALLSWGLDNLFIPLAIAYVLYVVDVNSMVTIDGLLLGGLFALFIAIFSIKVKFLNNSGATATFLLGTTIFG
VGGMVWTVPMLTFYLLSSILSKLGHKRKAKFDLVFEKGSQRDAGQVYANGGVAWIMMVIYSLTGDPYIFFAYLGTLAAVQ
ADTWATEIGTMWPNAKARLITTFKDVPVGTSGGVSIPGTLASFLGSLLICSSAVLMNVSWIDQVGIVTSLLVIGVSGLFA
SLVDSFFGATVQAQYYDPIRQKVTERTHSIASDGSRVANELLKGYDFVNNDLVNTLCAISGSAVAYLVVRNLVSLSL
>Mature_476_residues
GVVMFFIPSYFSSNFYPLAAAFLFAVVGLVSLKAGILQSLHGEPVVTQEGERVISYGPVLFPLVFFLQALFLWGEHVWIL
QISMLVLGIGDALAALVGTAAGGRHIENLTKSRKSIEGSMAMFISSLVILSVSIFVFRDAFTGGLVGQPIWKLLALALLL
ALLVTAVEALLSWGLDNLFIPLAIAYVLYVVDVNSMVTIDGLLLGGLFALFIAIFSIKVKFLNNSGATATFLLGTTIFGV
GGMVWTVPMLTFYLLSSILSKLGHKRKAKFDLVFEKGSQRDAGQVYANGGVAWIMMVIYSLTGDPYIFFAYLGTLAAVQA
DTWATEIGTMWPNAKARLITTFKDVPVGTSGGVSIPGTLASFLGSLLICSSAVLMNVSWIDQVGIVTSLLVIGVSGLFAS
LVDSFFGATVQAQYYDPIRQKVTERTHSIASDGSRVANELLKGYDFVNNDLVNTLCAISGSAVAYLVVRNLVSLSL

Specific function: Unknown

COG id: COG1836

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TMEM19 family [H]

Homologues:

Organism=Homo sapiens, GI21361720, Length=260, Percent_Identity=28.8461538461538, Blast_Score=103, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002794 [H]

Pfam domain/function: PF01940 DUF92 [H]

EC number: NA

Molecular weight: Translated: 51117; Mature: 50986

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVVMFFIPSYFSSNFYPLAAAFLFAVVGLVSLKAGILQSLHGEPVVTQEGERVISYGPV
CCEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCH
LFPLVFFLQALFLWGEHVWILQISMLVLGIGDALAALVGTAAGGRHIENLTKSRKSIEGS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
MAMFISSLVILSVSIFVFRDAFTGGLVGQPIWKLLALALLLALLVTAVEALLSWGLDNLF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
IPLAIAYVLYVVDVNSMVTIDGLLLGGLFALFIAIFSIKVKFLNNSGATATFLLGTTIFG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHH
VGGMVWTVPMLTFYLLSSILSKLGHKRKAKFDLVFEKGSQRDAGQVYANGGVAWIMMVIY
HHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEEECCCCCCCCCEEECCCHHHHHHHHH
SLTGDPYIFFAYLGTLAAVQADTWATEIGTMWPNAKARLITTFKDVPVGTSGGVSIPGTL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHH
ASFLGSLLICSSAVLMNVSWIDQVGIVTSLLVIGVSGLFASLVDSFFGATVQAQYYDPIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHH
QKVTERTHSIASDGSRVANELLKGYDFVNNDLVNTLCAISGSAVAYLVVRNLVSLSL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GVVMFFIPSYFSSNFYPLAAAFLFAVVGLVSLKAGILQSLHGEPVVTQEGERVISYGPV
CEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCH
LFPLVFFLQALFLWGEHVWILQISMLVLGIGDALAALVGTAAGGRHIENLTKSRKSIEGS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
MAMFISSLVILSVSIFVFRDAFTGGLVGQPIWKLLALALLLALLVTAVEALLSWGLDNLF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
IPLAIAYVLYVVDVNSMVTIDGLLLGGLFALFIAIFSIKVKFLNNSGATATFLLGTTIFG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHH
VGGMVWTVPMLTFYLLSSILSKLGHKRKAKFDLVFEKGSQRDAGQVYANGGVAWIMMVIY
HHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEEECCCCCCCCCEEECCCHHHHHHHHH
SLTGDPYIFFAYLGTLAAVQADTWATEIGTMWPNAKARLITTFKDVPVGTSGGVSIPGTL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHH
ASFLGSLLICSSAVLMNVSWIDQVGIVTSLLVIGVSGLFASLVDSFFGATVQAQYYDPIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHH
QKVTERTHSIASDGSRVANELLKGYDFVNNDLVNTLCAISGSAVAYLVVRNLVSLSL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]