| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673429
Identifier: 21673429
GI number: 21673429
Start: 596165
End: 596629
Strand: Direct
Name: 21673429
Synonym: CT0594
Alternate gene names: NA
Gene position: 596165-596629 (Clockwise)
Preceding gene: 21673424
Following gene: 21673430
Centisome position: 27.66
GC content: 58.06
Gene sequence:
>465_bases TTGGGTTGCGTATATTGCTTGTGTAAAGGTCTGTCAAACGATCCATTGCGGAGATTCCTGAACATGCCGCATCGCCAGCT TGATCATACCGCCGACCTCTGTTTCGAGGTGACTGCGGGTAGTTATCCGGAACTGTTGGGCGAGGCTTTGTGCGCCATGA CGGAGTGGATCGGGCCGGAGTGGAAAAATAGTGCGGTTGAACGCCCGTTCCGGATCGAAGCGCCTGACCGGGTAGCACTG CTGGTCGATCTGCTCAACGAAGCGCTCGCCCTGTCGCAGATTTACCGCGAAGCTTACGGCGCGCTTTCGATCCGCTCGAG CGGCGAGGAGTTCATCGAAGGCGCGTTTCTCGGCAGGGCGATTTCCGGCGCGCGGAATGAAATCAAGGCCGTAACCTGGC ATGGCGCGAAGGTCGAGCAGCGGGCTGACGGTTCGTGGTTGGCAATCCTGTTGATGGATATCTGA
Upstream 100 bases:
>100_bases GTCAAGGCTTTGCTCAAGGTAAGAAAAAAGGTCACCTCGAAAAACTTGCTCCCCGTTCGCTCACGACACTTTTTCGAGGT GCCTAAAATGCGACAAGGCG
Downstream 100 bases:
>100_bases TGGAGGGCAGGCGAGTATTCGCCGGGTTGCCCGTGGGCCGGGAGCTTGCCGAGGCAGTCGGGGAGTTCCGGCAGGGGCAC TCCGGGTTGAGAGTGCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MGCVYCLCKGLSNDPLRRFLNMPHRQLDHTADLCFEVTAGSYPELLGEALCAMTEWIGPEWKNSAVERPFRIEAPDRVAL LVDLLNEALALSQIYREAYGALSIRSSGEEFIEGAFLGRAISGARNEIKAVTWHGAKVEQRADGSWLAILLMDI
Sequences:
>Translated_154_residues MGCVYCLCKGLSNDPLRRFLNMPHRQLDHTADLCFEVTAGSYPELLGEALCAMTEWIGPEWKNSAVERPFRIEAPDRVAL LVDLLNEALALSQIYREAYGALSIRSSGEEFIEGAFLGRAISGARNEIKAVTWHGAKVEQRADGSWLAILLMDI >Mature_153_residues GCVYCLCKGLSNDPLRRFLNMPHRQLDHTADLCFEVTAGSYPELLGEALCAMTEWIGPEWKNSAVERPFRIEAPDRVALL VDLLNEALALSQIYREAYGALSIRSSGEEFIEGAFLGRAISGARNEIKAVTWHGAKVEQRADGSWLAILLMDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17113; Mature: 16982
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCVYCLCKGLSNDPLRRFLNMPHRQLDHTADLCFEVTAGSYPELLGEALCAMTEWIGPE CCHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC WKNSAVERPFRIEAPDRVALLVDLLNEALALSQIYREAYGALSIRSSGEEFIEGAFLGRA CCCHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH ISGARNEIKAVTWHGAKVEQRADGSWLAILLMDI HHHHHHHHEEEEECCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure GCVYCLCKGLSNDPLRRFLNMPHRQLDHTADLCFEVTAGSYPELLGEALCAMTEWIGPE CHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC WKNSAVERPFRIEAPDRVALLVDLLNEALALSQIYREAYGALSIRSSGEEFIEGAFLGRA CCCHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH ISGARNEIKAVTWHGAKVEQRADGSWLAILLMDI HHHHHHHHEEEEECCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA