Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is 21673407

Identifier: 21673407

GI number: 21673407

Start: 579751

End: 580830

Strand: Direct

Name: 21673407

Synonym: CT0572

Alternate gene names: NA

Gene position: 579751-580830 (Clockwise)

Preceding gene: 21673406

Following gene: 21673409

Centisome position: 26.9

GC content: 60.37

Gene sequence:

>1080_bases
ATGGCTGAAAAGAAACATCTCGACAGGCTGAAAGCTGGAGTCGCAAGCTGGAACCACTGGCGCAAAGCGCAGCCGGAAGT
CCGGCCCGACCTCAGCCAGGCCGATTTCAGCGCCGCCGACCTGAAAGGCATCGATCTTTCGGAGGCCGACCTCGTCGGCG
CGACTTTCGCGAAAGCGACGCTCTCCGGCGCGGATTTGCGCGGGGCCGATCTTCGCGGAGCCGACCTGTCGGGCGCGCGG
CTCGACGGCGTCAATCTGAGCCGCAGCACCATCGATCTCTCCACGCGCTACGATGGCGTGACCGGATGCCAGATCGGCGT
CAACGGCCTCTACTCGCCATCGACCGACTCGGCGGCCCTGATGCGCCTCGATCCGCCCGGCAACTCCATGCAGGGCGCCA
ACGCCGAGGCGGTCGTCGAAAGTTTGCGCCAAGCGCGCAAGCTGCACACCTTTTCGGTGATTCTTGCCGGAATCGCGATG
CTTTTCATCGTCATCAAGCCCAAAACCATCACCCTGCCATATCTGGCCGGATCGTTCAAGTTTGATGACTTCAGCTATGC
TTTTCTGGCCACCATTCTCTCGGCGGCGCTCCTGAGCCAGGTGGTTTCATTCATCGACTCGGCGCTGCAAGGCGCGCGCT
ACCTCAACGACCGCCGCGCGGCGATGCTGGTCGGCCACTTTCCGTGGCTGCTCTCCAAATACGAAAGCGACCCGGCGAAC
AAGCGTCAGTCAAGGGTCCTGCGCTTTTTTATGATTTTTCATCCGCTGATCTACCTCTACTTTTTCGTCCAGTGGAGTGC
GCTCGCCATCGGCGACTGGGATTCGGTCATCCGGCACTACCAGCAGATGCCGATTATTTTTGGCGAATACCTCCTGCCGG
TCGTCTATGTCATTCTGATCCGCATCTGCCTGCACCTCTTCCGTCTCTCCGAAGGTTTCCAGAAGCCGATCCTTTTCGAC
GCCGAAACCGAACGCAGCCGCCGCACCGACATGGAACGCCTTACCGAAGCCATCGAGCGCCAGTCCGCCCTTACCGCCGA
GCTGGTGGATGTACTGAAAAAGAGGGAGGGGAAGAGTTGA

Upstream 100 bases:

>100_bases
CGCCTCGCTCTTCAACGCCATTCTCGCCTGGCTCGAAAGAACGCAGAAGACGGCGGGCGAAAGAACCGTGACCGTAACGA
ACTGATTTTCAATAAGTTGC

Downstream 100 bases:

>100_bases
GCGTTGAGCGCGAGAAAATGAAGAACGGCTTTACCGTCTCTAAACTGTTGTGCAGCATGAGCAGATTTGCAGTTGTTCCG
ATACGCCGCGTGAGTGTTTT

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: Pentapeptide Repeat Protein

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MAEKKHLDRLKAGVASWNHWRKAQPEVRPDLSQADFSAADLKGIDLSEADLVGATFAKATLSGADLRGADLRGADLSGAR
LDGVNLSRSTIDLSTRYDGVTGCQIGVNGLYSPSTDSAALMRLDPPGNSMQGANAEAVVESLRQARKLHTFSVILAGIAM
LFIVIKPKTITLPYLAGSFKFDDFSYAFLATILSAALLSQVVSFIDSALQGARYLNDRRAAMLVGHFPWLLSKYESDPAN
KRQSRVLRFFMIFHPLIYLYFFVQWSALAIGDWDSVIRHYQQMPIIFGEYLLPVVYVILIRICLHLFRLSEGFQKPILFD
AETERSRRTDMERLTEAIERQSALTAELVDVLKKREGKS

Sequences:

>Translated_359_residues
MAEKKHLDRLKAGVASWNHWRKAQPEVRPDLSQADFSAADLKGIDLSEADLVGATFAKATLSGADLRGADLRGADLSGAR
LDGVNLSRSTIDLSTRYDGVTGCQIGVNGLYSPSTDSAALMRLDPPGNSMQGANAEAVVESLRQARKLHTFSVILAGIAM
LFIVIKPKTITLPYLAGSFKFDDFSYAFLATILSAALLSQVVSFIDSALQGARYLNDRRAAMLVGHFPWLLSKYESDPAN
KRQSRVLRFFMIFHPLIYLYFFVQWSALAIGDWDSVIRHYQQMPIIFGEYLLPVVYVILIRICLHLFRLSEGFQKPILFD
AETERSRRTDMERLTEAIERQSALTAELVDVLKKREGKS
>Mature_358_residues
AEKKHLDRLKAGVASWNHWRKAQPEVRPDLSQADFSAADLKGIDLSEADLVGATFAKATLSGADLRGADLRGADLSGARL
DGVNLSRSTIDLSTRYDGVTGCQIGVNGLYSPSTDSAALMRLDPPGNSMQGANAEAVVESLRQARKLHTFSVILAGIAML
FIVIKPKTITLPYLAGSFKFDDFSYAFLATILSAALLSQVVSFIDSALQGARYLNDRRAAMLVGHFPWLLSKYESDPANK
RQSRVLRFFMIFHPLIYLYFFVQWSALAIGDWDSVIRHYQQMPIIFGEYLLPVVYVILIRICLHLFRLSEGFQKPILFDA
ETERSRRTDMERLTEAIERQSALTAELVDVLKKREGKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40013; Mature: 39881

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKKHLDRLKAGVASWNHWRKAQPEVRPDLSQADFSAADLKGIDLSEADLVGATFAKAT
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHH
LSGADLRGADLRGADLSGARLDGVNLSRSTIDLSTRYDGVTGCQIGVNGLYSPSTDSAAL
HCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEHHCCCCCCCCEECCCCCCCCCCCCCEE
MRLDPPGNSMQGANAEAVVESLRQARKLHTFSVILAGIAMLFIVIKPKTITLPYLAGSFK
EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEECCCCC
FDDFSYAFLATILSAALLSQVVSFIDSALQGARYLNDRRAAMLVGHFPWLLSKYESDPAN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCH
KRQSRVLRFFMIFHPLIYLYFFVQWSALAIGDWDSVIRHYQQMPIIFGEYLLPVVYVILI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RICLHLFRLSEGFQKPILFDAETERSRRTDMERLTEAIERQSALTAELVDVLKKREGKS
HHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AEKKHLDRLKAGVASWNHWRKAQPEVRPDLSQADFSAADLKGIDLSEADLVGATFAKAT
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHH
LSGADLRGADLRGADLSGARLDGVNLSRSTIDLSTRYDGVTGCQIGVNGLYSPSTDSAAL
HCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEHHCCCCCCCCEECCCCCCCCCCCCCEE
MRLDPPGNSMQGANAEAVVESLRQARKLHTFSVILAGIAMLFIVIKPKTITLPYLAGSFK
EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEECCCCC
FDDFSYAFLATILSAALLSQVVSFIDSALQGARYLNDRRAAMLVGHFPWLLSKYESDPAN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCH
KRQSRVLRFFMIFHPLIYLYFFVQWSALAIGDWDSVIRHYQQMPIIFGEYLLPVVYVILI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RICLHLFRLSEGFQKPILFDAETERSRRTDMERLTEAIERQSALTAELVDVLKKREGKS
HHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA