| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673392
Identifier: 21673392
GI number: 21673392
Start: 565062
End: 565628
Strand: Direct
Name: 21673392
Synonym: CT0557
Alternate gene names: NA
Gene position: 565062-565628 (Clockwise)
Preceding gene: 21673389
Following gene: 21673393
Centisome position: 26.22
GC content: 51.15
Gene sequence:
>567_bases TTGATTGCAACCGTGAGTGCCAACCGATCCGATACTATGCGAATGTTTTCCGGCAGCCGTTCCATACCAGTCTTCGTCAT AAAGATTTTCTGCACCTGTTTTCTTTTTGTCCTCTCCGTTACCCTTTTGCCCGCGGCAGGCAGCGCTGCGAGTCCTGAAA TGATCCGCATTACCCGCGAGCGCAACCGGGTCGAAAGCACGCTCAAAGATCTCAAAAAGCAGCTCTCGGAGTATCAGTCA AAGCTCAACAGCACCAAAAAGAACGAGCGCCGTTCGCTAGCTGAGCTGAACAACATCCGCAAGCAGATCAAGGTTTATGA ACGTCTCATTGTCGAAAACCAGTCGCTTCTGAACAATCTCGACAATCAAATCGAGCAGCTTCAGAGCCAGCTTCAGGAAA ATCGAAAGACCTATCAGCATGTGTCATCTGACTTCCGGCAAGTGGTTATCGCGGCCTACAAGCATGGCGGAGACCGCGAT GCCGAGCTGATGCTCTCTTCGGGGTCGGTCAATAGTGCGATTGTGAGAGCCAGATATTTGGGATTTCTTTCAGGGGCGGT CAGGTAG
Upstream 100 bases:
>100_bases AAAGGCCTATTTAATTATTTCAGGCTCAGAAAAACAAATTTTATTTTAAAGCCACTTTTTATCTGAACCTGCAAACTGGC TCGTCCATTGTGCCGGTTTT
Downstream 100 bases:
>100_bases GTGAACGATTTGCGGTCGAGCGCACAGCAGATGGAGAGCAGCCGGGCGCAGCTTCAGCGGGTCTACCACGAGAAGGAGCT GGCAATGAAGAGCCAGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase; Membrane-Bound Metallopeptidase-Like
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MIATVSANRSDTMRMFSGSRSIPVFVIKIFCTCFLFVLSVTLLPAAGSAASPEMIRITRERNRVESTLKDLKKQLSEYQS KLNSTKKNERRSLAELNNIRKQIKVYERLIVENQSLLNNLDNQIEQLQSQLQENRKTYQHVSSDFRQVVIAAYKHGGDRD AELMLSSGSVNSAIVRARYLGFLSGAVR
Sequences:
>Translated_188_residues MIATVSANRSDTMRMFSGSRSIPVFVIKIFCTCFLFVLSVTLLPAAGSAASPEMIRITRERNRVESTLKDLKKQLSEYQS KLNSTKKNERRSLAELNNIRKQIKVYERLIVENQSLLNNLDNQIEQLQSQLQENRKTYQHVSSDFRQVVIAAYKHGGDRD AELMLSSGSVNSAIVRARYLGFLSGAVR >Mature_188_residues MIATVSANRSDTMRMFSGSRSIPVFVIKIFCTCFLFVLSVTLLPAAGSAASPEMIRITRERNRVESTLKDLKKQLSEYQS KLNSTKKNERRSLAELNNIRKQIKVYERLIVENQSLLNNLDNQIEQLQSQLQENRKTYQHVSSDFRQVVIAAYKHGGDRD AELMLSSGSVNSAIVRARYLGFLSGAVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21304; Mature: 21304
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIATVSANRSDTMRMFSGSRSIPVFVIKIFCTCFLFVLSVTLLPAAGSAASPEMIRITRE CEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH RNRVESTLKDLKKQLSEYQSKLNSTKKNERRSLAELNNIRKQIKVYERLIVENQSLLNNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DNQIEQLQSQLQENRKTYQHVSSDFRQVVIAAYKHGGDRDAELMLSSGSVNSAIVRARYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCCCHHHHHHHHHHH GFLSGAVR HHHHHCCC >Mature Secondary Structure MIATVSANRSDTMRMFSGSRSIPVFVIKIFCTCFLFVLSVTLLPAAGSAASPEMIRITRE CEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH RNRVESTLKDLKKQLSEYQSKLNSTKKNERRSLAELNNIRKQIKVYERLIVENQSLLNNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DNQIEQLQSQLQENRKTYQHVSSDFRQVVIAAYKHGGDRDAELMLSSGSVNSAIVRARYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCCCHHHHHHHHHHH GFLSGAVR HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA