Click here to switch to the map view.

The map label for this gene is 21673352

Identifier: 21673352

GI number: 21673352

Start: 523963

End: 524622

Strand: Reverse

Name: 21673352

Synonym: CT0517

Alternate gene names: NA

Gene position: 524622-523963 (Counterclockwise)

Preceding gene: 21673353

Following gene: 21673351

Centisome position: 24.35

GC content: 44.39

Gene sequence:

>660_bases
ATGAAGAAATACGCAATTACCTCTATAGCTGCAGCAATGCTATCGGCACCAGCTATAACAGCTACAGCGGATCCTTTATA
TATCAGCCTTTCTGGTGGACTGAACCTTATGAGTAATAGTGACGCGAAGGTTTCGGACACTGAGACATCGATCAAAAATG
CTGTTGAGTACAAGCGAGGATATGCTCTGGAGGGCGCGTTTGGCGAAAAAACAGGTGTGTTCCGTGGAGAAATCGCCGTT
GGCTACCAATCAAGTGATGTCGATAAGGTATTAGGTTCAGACATCGTTGAGCAATTGGGTGAAATCGATAATTACGAAGA
TCTCACAGTCACGGCATCAGCACTTACGGTCATGTATAATGTTTATGCTGATTATGACATGAAAGGGATACTCTCTCCCT
ATCTGATGGGAGGTCTCGGAGCAGCGTTTGTGGATATGGGAACTTCGTTCAAAGTCGATGGGGTCGAGTATGATAGTTCA
TACGACAAGACCGTATTTGCCTGGCAACTTGGAGCTGGTTTAGGTATCAAGATAACGAATAATGTAGCTCTTGACTTGGG
CTACCGTTATTTCAAAACGGGAGACCTTGATTTGGAAAATAAGACAAAGCTCTCATTTGGAGGCAGCAAAATCCTCCTTG
GAATGCGCTACAACCTCTAA

Upstream 100 bases:

>100_bases
CATTTCAATCAGAAGAGAAGAATTTATACCGGCTGACAACGTAAAAAATCAGGATATCACTCATTACAGATGAAATCCAC
CAAACACAACCAAGTGTAAA

Downstream 100 bases:

>100_bases
CCTGCTTTGACTATTGAATTGACGGCATCAAACCTTTTGATGCCGTCAATTCTTTTTGGCCCTATTTCATCTTACCATCA
GTTCTCCCCCATCACGCACG

Product: tia invasion determinant-related protein

Products: NA

Alternate protein names: Porin Opacity Type; Surface Antigen Msp4 Family Protein; Tia Invasion Determinant-Related Protein; Hemagglutinin-Related Protein

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKKYAITSIAAAMLSAPAITATADPLYISLSGGLNLMSNSDAKVSDTETSIKNAVEYKRGYALEGAFGEKTGVFRGEIAV
GYQSSDVDKVLGSDIVEQLGEIDNYEDLTVTASALTVMYNVYADYDMKGILSPYLMGGLGAAFVDMGTSFKVDGVEYDSS
YDKTVFAWQLGAGLGIKITNNVALDLGYRYFKTGDLDLENKTKLSFGGSKILLGMRYNL

Sequences:

>Translated_219_residues
MKKYAITSIAAAMLSAPAITATADPLYISLSGGLNLMSNSDAKVSDTETSIKNAVEYKRGYALEGAFGEKTGVFRGEIAV
GYQSSDVDKVLGSDIVEQLGEIDNYEDLTVTASALTVMYNVYADYDMKGILSPYLMGGLGAAFVDMGTSFKVDGVEYDSS
YDKTVFAWQLGAGLGIKITNNVALDLGYRYFKTGDLDLENKTKLSFGGSKILLGMRYNL
>Mature_219_residues
MKKYAITSIAAAMLSAPAITATADPLYISLSGGLNLMSNSDAKVSDTETSIKNAVEYKRGYALEGAFGEKTGVFRGEIAV
GYQSSDVDKVLGSDIVEQLGEIDNYEDLTVTASALTVMYNVYADYDMKGILSPYLMGGLGAAFVDMGTSFKVDGVEYDSS
YDKTVFAWQLGAGLGIKITNNVALDLGYRYFKTGDLDLENKTKLSFGGSKILLGMRYNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23522; Mature: 23522

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYAITSIAAAMLSAPAITATADPLYISLSGGLNLMSNSDAKVSDTETSIKNAVEYKRG
CCCHHHHHHHHHHHCCCCEEECCCCEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHCC
YALEGAFGEKTGVFRGEIAVGYQSSDVDKVLGSDIVEQLGEIDNYEDLTVTASALTVMYN
EEEECCCCCCCCCEECEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHH
VYADYDMKGILSPYLMGGLGAAFVDMGTSFKVDGVEYDSSYDKTVFAWQLGAGLGIKITN
HHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCEEECCCCCCEEEEEEECCCCEEEEEC
NVALDLGYRYFKTGDLDLENKTKLSFGGSKILLGMRYNL
CEEEECCEEEEECCCCCCCCCEEEEECCCEEEEEEEECC
>Mature Secondary Structure
MKKYAITSIAAAMLSAPAITATADPLYISLSGGLNLMSNSDAKVSDTETSIKNAVEYKRG
CCCHHHHHHHHHHHCCCCEEECCCCEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHCC
YALEGAFGEKTGVFRGEIAVGYQSSDVDKVLGSDIVEQLGEIDNYEDLTVTASALTVMYN
EEEECCCCCCCCCEECEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHH
VYADYDMKGILSPYLMGGLGAAFVDMGTSFKVDGVEYDSSYDKTVFAWQLGAGLGIKITN
HHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCEEECCCCCCEEEEEEECCCCEEEEEC
NVALDLGYRYFKTGDLDLENKTKLSFGGSKILLGMRYNL
CEEEECCEEEEECCCCCCCCCEEEEECCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA