| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is ygaP [C]
Identifier: 21673349
GI number: 21673349
Start: 522645
End: 523115
Strand: Reverse
Name: ygaP [C]
Synonym: CT0514
Alternate gene names: 21673349
Gene position: 523115-522645 (Counterclockwise)
Preceding gene: 21673350
Following gene: 21673348
Centisome position: 24.28
GC content: 54.56
Gene sequence:
>471_bases ATGGCTATCGCCACGGCCAGAGCTGGCGGAAAAGAAACAGGCACTGAACAGATGTACATTTTACAAGTAACTAACTCTCG AAGCACTATGTCCAAGATGAGCAATGTGAAAGAGGTCAATGCCTCTACCGCCTTTTCGATGATAAAAAAAGGAGCGCTCC TGGTCGATGTCCGCGAAACCCGGGAAATCAACCGCAAAGCGTTCGGCGTCTCCGATTATCTGTCGGTTCCGATGAGCCGG TTCCAGAGCAGCCTTCACGAAATCCCGGCGGAGCGCAAGGTGATCCTCGCCTGCCACAGCGGCAACCGCAGCAGCATAGC TTCGCGCATCCTGGTCAACAGCGGCCACCGCAAGGTGCACAACCTGCAACACGGCATCATCAGCTGGGAGCGAGAAGGGC TACCGGTCAGAAAAAAGGAGTCACCAAGCCCGTTGACCATGCTATTCCAAATGTTCCGCAAAGAGGCCTGA
Upstream 100 bases:
>100_bases TTTTTCCGATATTTTGTATTATCCGTACCCGCACGGGCATCGGCAGAAAAAGCAACCGCCCCTCGCCGCCCGGTGCGCCT GATAACCGCCTGTTTGCACA
Downstream 100 bases:
>100_bases AACATTCCCGAACTGACAGGCAGGCCGGAAGCATAGAAAAATCGACCAGCGGAATATTTCCGGAAAGGAACTCTCTCGTG ACGCTCTCGGCCTGCACTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Transferase/Hydrolase
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MAIATARAGGKETGTEQMYILQVTNSRSTMSKMSNVKEVNASTAFSMIKKGALLVDVRETREINRKAFGVSDYLSVPMSR FQSSLHEIPAERKVILACHSGNRSSIASRILVNSGHRKVHNLQHGIISWEREGLPVRKKESPSPLTMLFQMFRKEA
Sequences:
>Translated_156_residues MAIATARAGGKETGTEQMYILQVTNSRSTMSKMSNVKEVNASTAFSMIKKGALLVDVRETREINRKAFGVSDYLSVPMSR FQSSLHEIPAERKVILACHSGNRSSIASRILVNSGHRKVHNLQHGIISWEREGLPVRKKESPSPLTMLFQMFRKEA >Mature_155_residues AIATARAGGKETGTEQMYILQVTNSRSTMSKMSNVKEVNASTAFSMIKKGALLVDVRETREINRKAFGVSDYLSVPMSRF QSSLHEIPAERKVILACHSGNRSSIASRILVNSGHRKVHNLQHGIISWEREGLPVRKKESPSPLTMLFQMFRKEA
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17417; Mature: 17286
Theoretical pI: Translated: 11.01; Mature: 11.01
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIATARAGGKETGTEQMYILQVTNSRSTMSKMSNVKEVNASTAFSMIKKGALLVDVRET CCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHH REINRKAFGVSDYLSVPMSRFQSSLHEIPAERKVILACHSGNRSSIASRILVNSGHRKVH HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCHHHH NLQHGIISWEREGLPVRKKESPSPLTMLFQMFRKEA HHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure AIATARAGGKETGTEQMYILQVTNSRSTMSKMSNVKEVNASTAFSMIKKGALLVDVRET CCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHH REINRKAFGVSDYLSVPMSRFQSSLHEIPAERKVILACHSGNRSSIASRILVNSGHRKVH HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCHHHH NLQHGIISWEREGLPVRKKESPSPLTMLFQMFRKEA HHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA