Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is ygaP [C]

Identifier: 21673349

GI number: 21673349

Start: 522645

End: 523115

Strand: Reverse

Name: ygaP [C]

Synonym: CT0514

Alternate gene names: 21673349

Gene position: 523115-522645 (Counterclockwise)

Preceding gene: 21673350

Following gene: 21673348

Centisome position: 24.28

GC content: 54.56

Gene sequence:

>471_bases
ATGGCTATCGCCACGGCCAGAGCTGGCGGAAAAGAAACAGGCACTGAACAGATGTACATTTTACAAGTAACTAACTCTCG
AAGCACTATGTCCAAGATGAGCAATGTGAAAGAGGTCAATGCCTCTACCGCCTTTTCGATGATAAAAAAAGGAGCGCTCC
TGGTCGATGTCCGCGAAACCCGGGAAATCAACCGCAAAGCGTTCGGCGTCTCCGATTATCTGTCGGTTCCGATGAGCCGG
TTCCAGAGCAGCCTTCACGAAATCCCGGCGGAGCGCAAGGTGATCCTCGCCTGCCACAGCGGCAACCGCAGCAGCATAGC
TTCGCGCATCCTGGTCAACAGCGGCCACCGCAAGGTGCACAACCTGCAACACGGCATCATCAGCTGGGAGCGAGAAGGGC
TACCGGTCAGAAAAAAGGAGTCACCAAGCCCGTTGACCATGCTATTCCAAATGTTCCGCAAAGAGGCCTGA

Upstream 100 bases:

>100_bases
TTTTTCCGATATTTTGTATTATCCGTACCCGCACGGGCATCGGCAGAAAAAGCAACCGCCCCTCGCCGCCCGGTGCGCCT
GATAACCGCCTGTTTGCACA

Downstream 100 bases:

>100_bases
AACATTCCCGAACTGACAGGCAGGCCGGAAGCATAGAAAAATCGACCAGCGGAATATTTCCGGAAAGGAACTCTCTCGTG
ACGCTCTCGGCCTGCACTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Transferase/Hydrolase

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MAIATARAGGKETGTEQMYILQVTNSRSTMSKMSNVKEVNASTAFSMIKKGALLVDVRETREINRKAFGVSDYLSVPMSR
FQSSLHEIPAERKVILACHSGNRSSIASRILVNSGHRKVHNLQHGIISWEREGLPVRKKESPSPLTMLFQMFRKEA

Sequences:

>Translated_156_residues
MAIATARAGGKETGTEQMYILQVTNSRSTMSKMSNVKEVNASTAFSMIKKGALLVDVRETREINRKAFGVSDYLSVPMSR
FQSSLHEIPAERKVILACHSGNRSSIASRILVNSGHRKVHNLQHGIISWEREGLPVRKKESPSPLTMLFQMFRKEA
>Mature_155_residues
AIATARAGGKETGTEQMYILQVTNSRSTMSKMSNVKEVNASTAFSMIKKGALLVDVRETREINRKAFGVSDYLSVPMSRF
QSSLHEIPAERKVILACHSGNRSSIASRILVNSGHRKVHNLQHGIISWEREGLPVRKKESPSPLTMLFQMFRKEA

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17417; Mature: 17286

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIATARAGGKETGTEQMYILQVTNSRSTMSKMSNVKEVNASTAFSMIKKGALLVDVRET
CCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHH
REINRKAFGVSDYLSVPMSRFQSSLHEIPAERKVILACHSGNRSSIASRILVNSGHRKVH
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCHHHH
NLQHGIISWEREGLPVRKKESPSPLTMLFQMFRKEA
HHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
AIATARAGGKETGTEQMYILQVTNSRSTMSKMSNVKEVNASTAFSMIKKGALLVDVRET
CCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHH
REINRKAFGVSDYLSVPMSRFQSSLHEIPAERKVILACHSGNRSSIASRILVNSGHRKVH
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCHHHH
NLQHGIISWEREGLPVRKKESPSPLTMLFQMFRKEA
HHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA