| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673339
Identifier: 21673339
GI number: 21673339
Start: 514752
End: 515432
Strand: Direct
Name: 21673339
Synonym: CT0504
Alternate gene names: NA
Gene position: 514752-515432 (Clockwise)
Preceding gene: 21673337
Following gene: 21673341
Centisome position: 23.89
GC content: 54.77
Gene sequence:
>681_bases ATGGCTACGGCCATCTATGTGTTTTTCGATAACGATTACATTACCGATCGCGCCGGTATCCAGAAACTCTTCGAGCAGCG TCCGCTTGTTGAGGTGATCGTGCAGAGCATTCCCTACGTCTGGCTGTTTGCGCTCTTCTTGTTTATCGTGGCCGCTTTTT ACGGATTTCGCCACACCCGCAAAGGGTACCGTTACCCGATGTTCCGCGTTATCGGCGGTTCGCTTCTGGTCAGTTTCCTG CTGTGCGGTTTGCTCAATGTTTTCGATATCGGAAAGTACGTGCACCGCTATCTTATTGATAACGTAGAGGGTTACGGTAG TCTGGTCTATACCAATGACGTGCTCTGGGCGCAGCAGGAGAAAGGGTTGCTTGGCGGCAAGGTGGTGCGCTACACGCCTG GCGACAGCACGCTGGTCATCAGGGACTACCGGCACCATTTCTGGACGGTCGATCTTTCTCGCGCCAGGGCGCGTCCCGGC ACGAAGATAGTGACCGGTAAATATCTGAAAATCACCGGCCTCAAAACCGGCCAGAGCACATTCAAGGCCCTAACGATCCG ACCCTGGGTCAAAAAGAGCCACCATCGTCATCCGAAAGCTCCGAAGCCGACACCCGTGAAAAAGAGTTCGGCAAGCGGCA AGCCCGCGTCACCGCTATCTCCCGCTCAGCAACTGAAGTGA
Upstream 100 bases:
>100_bases AAAAAGGAAGCTCGTTCCGATTCCGCGCTGGCATTTCATCCTGAAACGCTCCGTTTTCTGGGCCTTGGCCCTGATTTCGG TCATCACAGGGGCCGTGTCG
Downstream 100 bases:
>100_bases AACGGCGGCAAGGAGCGTCGTCGTGACTGGCGTGCGTTATTCCTGACACCCCATCGGGGTCGCCCACCTGAATGTTCCTT CCATTCGGGCAGAGCGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MATAIYVFFDNDYITDRAGIQKLFEQRPLVEVIVQSIPYVWLFALFLFIVAAFYGFRHTRKGYRYPMFRVIGGSLLVSFL LCGLLNVFDIGKYVHRYLIDNVEGYGSLVYTNDVLWAQQEKGLLGGKVVRYTPGDSTLVIRDYRHHFWTVDLSRARARPG TKIVTGKYLKITGLKTGQSTFKALTIRPWVKKSHHRHPKAPKPTPVKKSSASGKPASPLSPAQQLK
Sequences:
>Translated_226_residues MATAIYVFFDNDYITDRAGIQKLFEQRPLVEVIVQSIPYVWLFALFLFIVAAFYGFRHTRKGYRYPMFRVIGGSLLVSFL LCGLLNVFDIGKYVHRYLIDNVEGYGSLVYTNDVLWAQQEKGLLGGKVVRYTPGDSTLVIRDYRHHFWTVDLSRARARPG TKIVTGKYLKITGLKTGQSTFKALTIRPWVKKSHHRHPKAPKPTPVKKSSASGKPASPLSPAQQLK >Mature_225_residues ATAIYVFFDNDYITDRAGIQKLFEQRPLVEVIVQSIPYVWLFALFLFIVAAFYGFRHTRKGYRYPMFRVIGGSLLVSFLL CGLLNVFDIGKYVHRYLIDNVEGYGSLVYTNDVLWAQQEKGLLGGKVVRYTPGDSTLVIRDYRHHFWTVDLSRARARPGT KIVTGKYLKITGLKTGQSTFKALTIRPWVKKSHHRHPKAPKPTPVKKSSASGKPASPLSPAQQLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25695; Mature: 25564
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAIYVFFDNDYITDRAGIQKLFEQRPLVEVIVQSIPYVWLFALFLFIVAAFYGFRHTR CCEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC KGYRYPMFRVIGGSLLVSFLLCGLLNVFDIGKYVHRYLIDNVEGYGSLVYTNDVLWAQQE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEHHC KGLLGGKVVRYTPGDSTLVIRDYRHHFWTVDLSRARARPGTKIVTGKYLKITGLKTGQST CCCCCCEEEEECCCCCEEEEEECCCEEEEEEHHHHCCCCCCEEEECCEEEEEECCCCHHH FKALTIRPWVKKSHHRHPKAPKPTPVKKSSASGKPASPLSPAQQLK HHEEEECHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC >Mature Secondary Structure ATAIYVFFDNDYITDRAGIQKLFEQRPLVEVIVQSIPYVWLFALFLFIVAAFYGFRHTR CEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC KGYRYPMFRVIGGSLLVSFLLCGLLNVFDIGKYVHRYLIDNVEGYGSLVYTNDVLWAQQE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEHHC KGLLGGKVVRYTPGDSTLVIRDYRHHFWTVDLSRARARPGTKIVTGKYLKITGLKTGQST CCCCCCEEEEECCCCCEEEEEECCCEEEEEEHHHHCCCCCCEEEECCEEEEEECCCCHHH FKALTIRPWVKKSHHRHPKAPKPTPVKKSSASGKPASPLSPAQQLK HHEEEECHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA