Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21673336

Identifier: 21673336

GI number: 21673336

Start: 513233

End: 513949

Strand: Direct

Name: 21673336

Synonym: CT0501

Alternate gene names: NA

Gene position: 513233-513949 (Clockwise)

Preceding gene: 21673327

Following gene: 21673337

Centisome position: 23.82

GC content: 52.58

Gene sequence:

>717_bases
GTGTCGCAGGGTAAATCATGGAAATATTGTACCGGGGACGAACGAGGCTTCTGCGCGCAAGGTGTTCAGCGCATTTTTTC
TGCGAAAGATCCGTTTTTGACCGACGTGATTTGGCGGATCGAAATGCGTAAAAAGGTGATTAGATTGTCTCTGAATTCAT
CTGCCTCGAACGCTCGAAAAACGGTAAGGCCGGTGAATTGTTATAACCATTCGGTACAGAAAATCAGGGGACCATTGATT
CACAACTTCAAGGGCGGCCTCAGAGCCGTGTCGATATTCGAGGCCGGAAAGGGGATTCTGGTTTTGTCGCTGGCGCTGCT
GCTGTCTACTTTCGTTTCCCGCGATCTTCCCGGTATTATTGCCGAGATCAAAACGCGATGGAATGTCGATCCGTCAAGTC
ACATGCCGCATTTGGCCAAGATGCTCATGCAGGACTTGACCGGAGCGCGGCTTCACTTTCTGATAATGCTGGCCGCCATC
TATGCGCTCATGCGCTTTATCGAGGCGTATGGACTCTGGTTCGCGAGACGTTGGGCCGAGTGGTTCGCGCTGGTGAGCGG
CGGGGTCTATCTGCCGATTGAGCTCTATGAGCTTGCCAAAGGCTTCAGCTGGTTGAAAATGGGGATTCTGACCATCAACC
TCATTATCGTTGCCTACATGGCTTGGCTGCTGATTCGCGGCAAGAGCGTGCTGAAGAGCGATGAGGGCGACGCGTGA

Upstream 100 bases:

>100_bases
TCAAATTTAATCAGAATAATTTAGGTATAAAAATTAAATTTCAGTAAAAAATAAATTTTTGATATAAGTGTTTTTGCTGA
ATAACCAGAGTATTGCCAGT

Downstream 100 bases:

>100_bases
CCCCGGTTGACCTGTATTGAAAAGATGGTGTGCCCGGAAGGTTCGGTTTTTAAGAAATGTTCAATGCAAAATGGCAGGTT
TTTCAGTCAATAGTCCCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MSQGKSWKYCTGDERGFCAQGVQRIFSAKDPFLTDVIWRIEMRKKVIRLSLNSSASNARKTVRPVNCYNHSVQKIRGPLI
HNFKGGLRAVSIFEAGKGILVLSLALLLSTFVSRDLPGIIAEIKTRWNVDPSSHMPHLAKMLMQDLTGARLHFLIMLAAI
YALMRFIEAYGLWFARRWAEWFALVSGGVYLPIELYELAKGFSWLKMGILTINLIIVAYMAWLLIRGKSVLKSDEGDA

Sequences:

>Translated_238_residues
MSQGKSWKYCTGDERGFCAQGVQRIFSAKDPFLTDVIWRIEMRKKVIRLSLNSSASNARKTVRPVNCYNHSVQKIRGPLI
HNFKGGLRAVSIFEAGKGILVLSLALLLSTFVSRDLPGIIAEIKTRWNVDPSSHMPHLAKMLMQDLTGARLHFLIMLAAI
YALMRFIEAYGLWFARRWAEWFALVSGGVYLPIELYELAKGFSWLKMGILTINLIIVAYMAWLLIRGKSVLKSDEGDA
>Mature_237_residues
SQGKSWKYCTGDERGFCAQGVQRIFSAKDPFLTDVIWRIEMRKKVIRLSLNSSASNARKTVRPVNCYNHSVQKIRGPLIH
NFKGGLRAVSIFEAGKGILVLSLALLLSTFVSRDLPGIIAEIKTRWNVDPSSHMPHLAKMLMQDLTGARLHFLIMLAAIY
ALMRFIEAYGLWFARRWAEWFALVSGGVYLPIELYELAKGFSWLKMGILTINLIIVAYMAWLLIRGKSVLKSDEGDA

Specific function: Unknown

COG id: COG3305

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26909; Mature: 26778

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQGKSWKYCTGDERGFCAQGVQRIFSAKDPFLTDVIWRIEMRKKVIRLSLNSSASNARK
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
TVRPVNCYNHSVQKIRGPLIHNFKGGLRAVSIFEAGKGILVLSLALLLSTFVSRDLPGII
HCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHH
AEIKTRWNVDPSSHMPHLAKMLMQDLTGARLHFLIMLAAIYALMRFIEAYGLWFARRWAE
HHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFALVSGGVYLPIELYELAKGFSWLKMGILTINLIIVAYMAWLLIRGKSVLKSDEGDA
HHHHHHCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCC
>Mature Secondary Structure 
SQGKSWKYCTGDERGFCAQGVQRIFSAKDPFLTDVIWRIEMRKKVIRLSLNSSASNARK
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
TVRPVNCYNHSVQKIRGPLIHNFKGGLRAVSIFEAGKGILVLSLALLLSTFVSRDLPGII
HCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHH
AEIKTRWNVDPSSHMPHLAKMLMQDLTGARLHFLIMLAAIYALMRFIEAYGLWFARRWAE
HHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFALVSGGVYLPIELYELAKGFSWLKMGILTINLIIVAYMAWLLIRGKSVLKSDEGDA
HHHHHHCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA