Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21673323

Identifier: 21673323

GI number: 21673323

Start: 502380

End: 503705

Strand: Direct

Name: 21673323

Synonym: CT0488

Alternate gene names: NA

Gene position: 502380-503705 (Clockwise)

Preceding gene: 21673322

Following gene: 21673325

Centisome position: 23.31

GC content: 52.87

Gene sequence:

>1326_bases
ATGCTTAAATCTTTGCTGCGTATTCTCAGCCTGCGTCAGGATGCGGAGGCATTCGATGCCATCCACAACGCGGTCGAGGC
TGATATCATGTTCAGCGGGGCGCGCATCTGGGTGCTGATTTCTGCCATTATCCTCGCCTCGGTCGGCCTCAACATGAACT
CCAGCGCGGTTATCATTGGCGCCATGCTGATTTCGCCGCTCATGGGCCCGATCAACGGCATGGGCTACAGCATCGCGACC
TATGATTTCCCGTTGCTCCGGAAGTCTTTCAAGAACTTCTCTTTTGCGGTGATTTCGAGTCTGGTCGCTTCAACCCTCTA
TTTTGCCATCACTCCGGTATCCAGCGCTCATTCGGAGTTGCTTGCCCGCACGAGTCCCACCATCTATGATGTACTGGTCG
CGCTGTTTGGCGGCTTGGCCGGGGCGATCTCCCTGACCACGAAACTCAAGGGCAACGTGGTACCGGGTGTGGCGATTGCC
ACGGCGCTCATGCCACCGCTCTGCACGGCGGGCTATGGCTTGGCGACCGGCCACTTCACCTTCTTTTTTGGTGCGCTCTA
CCTTTTTACAATCAATAGCGTTTTCATCGGACTTGCCAATGTCGGTTTCGCGCGAGTGATGCGGATTCCGCTACGAAGCT
CTCTTCCGGAAGAGAAAAGAACCGGTATCAACCGTATCATCACGGCGGTCATTCTGGTTACACTGATCCCGAGCGTCTAT
TTCGGCTATGTGCTTGTCAAGAAGGAGCATTTTATTGAAACCGCCACAAGGTTTGTTCAAACGGTCAGCCTTTTCAAAGG
GAATTTTCTGCTTCGCTATGACATTGATGGCGATAGCCGCACGATTTCAATGATTTATGCCGGCGAACCGCTGACCAGTG
ACGACAAGGTGGAATTGGGCAGGCGAGCGGAAAAATTCGGCCTCGAGCAGGTCACCCTGAAGTTCGAACAGGGGCTGGTA
ATCAGTAAAGACAAGGAATTTCAGGATAAGCTGAGTCAAATGGTAGAGACGGATCGTCAGAAAATTGAAATCGCTCGTCT
CAATGCGGCGTTGCAAGCCAATCAAAGGCAGCAAGATAGTCTCCGTCAGGTCAAATACACCGGCCTGAAACTTCTCAATG
AACTCAAGCCGTTGTTTCCGCAGATTACGAGCTGCCTTTATGCTGAGTCCTATCTTTTTTCAGACAGCACGGGCAAGAAA
CCTCTGCACAGAAGTTACGTTCTCCTTTCGGCGGCAAAACCCATCAGCCGGGTTGACCGCACGAAAATGGAGAACTGGCT
CAAAGCCCGGTTGCAGAACGACAGCCTGCGGGTGGTGTTCGAGTGA

Upstream 100 bases:

>100_bases
TTGTAGGAGGCTTCACGGAAGTTTTCCGGCACTTTCCCTGGTTTGTTTTGATTTCGGGATGCCGTGCCAGCCGCCGGTTT
GATCAACTATCCTGTTAGCC

Downstream 100 bases:

>100_bases
ATGTCAGCGCTTGATGGCCGCCTGGCTCTTTTTATCCGCGCTGTTTTCTTGATTGATGGAGCTGTGGGGAGGATTAACCG
CAGTATTCTTTCTTCTCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MLKSLLRILSLRQDAEAFDAIHNAVEADIMFSGARIWVLISAIILASVGLNMNSSAVIIGAMLISPLMGPINGMGYSIAT
YDFPLLRKSFKNFSFAVISSLVASTLYFAITPVSSAHSELLARTSPTIYDVLVALFGGLAGAISLTTKLKGNVVPGVAIA
TALMPPLCTAGYGLATGHFTFFFGALYLFTINSVFIGLANVGFARVMRIPLRSSLPEEKRTGINRIITAVILVTLIPSVY
FGYVLVKKEHFIETATRFVQTVSLFKGNFLLRYDIDGDSRTISMIYAGEPLTSDDKVELGRRAEKFGLEQVTLKFEQGLV
ISKDKEFQDKLSQMVETDRQKIEIARLNAALQANQRQQDSLRQVKYTGLKLLNELKPLFPQITSCLYAESYLFSDSTGKK
PLHRSYVLLSAAKPISRVDRTKMENWLKARLQNDSLRVVFE

Sequences:

>Translated_441_residues
MLKSLLRILSLRQDAEAFDAIHNAVEADIMFSGARIWVLISAIILASVGLNMNSSAVIIGAMLISPLMGPINGMGYSIAT
YDFPLLRKSFKNFSFAVISSLVASTLYFAITPVSSAHSELLARTSPTIYDVLVALFGGLAGAISLTTKLKGNVVPGVAIA
TALMPPLCTAGYGLATGHFTFFFGALYLFTINSVFIGLANVGFARVMRIPLRSSLPEEKRTGINRIITAVILVTLIPSVY
FGYVLVKKEHFIETATRFVQTVSLFKGNFLLRYDIDGDSRTISMIYAGEPLTSDDKVELGRRAEKFGLEQVTLKFEQGLV
ISKDKEFQDKLSQMVETDRQKIEIARLNAALQANQRQQDSLRQVKYTGLKLLNELKPLFPQITSCLYAESYLFSDSTGKK
PLHRSYVLLSAAKPISRVDRTKMENWLKARLQNDSLRVVFE
>Mature_441_residues
MLKSLLRILSLRQDAEAFDAIHNAVEADIMFSGARIWVLISAIILASVGLNMNSSAVIIGAMLISPLMGPINGMGYSIAT
YDFPLLRKSFKNFSFAVISSLVASTLYFAITPVSSAHSELLARTSPTIYDVLVALFGGLAGAISLTTKLKGNVVPGVAIA
TALMPPLCTAGYGLATGHFTFFFGALYLFTINSVFIGLANVGFARVMRIPLRSSLPEEKRTGINRIITAVILVTLIPSVY
FGYVLVKKEHFIETATRFVQTVSLFKGNFLLRYDIDGDSRTISMIYAGEPLTSDDKVELGRRAEKFGLEQVTLKFEQGLV
ISKDKEFQDKLSQMVETDRQKIEIARLNAALQANQRQQDSLRQVKYTGLKLLNELKPLFPQITSCLYAESYLFSDSTGKK
PLHRSYVLLSAAKPISRVDRTKMENWLKARLQNDSLRVVFE

Specific function: Unknown

COG id: COG1808

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005233
- InterPro:   IPR013031
- InterPro:   IPR005240 [H]

Pfam domain/function: PF04087 DUF389 [H]

EC number: NA

Molecular weight: Translated: 48752; Mature: 48752

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSLLRILSLRQDAEAFDAIHNAVEADIMFSGARIWVLISAIILASVGLNMNSSAVIIG
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCCCCCCHHHHH
AMLISPLMGPINGMGYSIATYDFPLLRKSFKNFSFAVISSLVASTLYFAITPVSSAHSEL
HHHHHHHHCCCCCCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
LARTSPTIYDVLVALFGGLAGAISLTTKLKGNVVPGVAIATALMPPLCTAGYGLATGHFT
HHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHCCCCCCHHHHH
FFFGALYLFTINSVFIGLANVGFARVMRIPLRSSLPEEKRTGINRIITAVILVTLIPSVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FGYVLVKKEHFIETATRFVQTVSLFKGNFLLRYDIDGDSRTISMIYAGEPLTSDDKVELG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECCCCCCCCHHHHH
RRAEKFGLEQVTLKFEQGLVISKDKEFQDKLSQMVETDRQKIEIARLNAALQANQRQQDS
HHHHHHCHHHHEEHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LRQVKYTGLKLLNELKPLFPQITSCLYAESYLFSDSTGKKPLHRSYVLLSAAKPISRVDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEECCCHHHHHHH
TKMENWLKARLQNDSLRVVFE
HHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MLKSLLRILSLRQDAEAFDAIHNAVEADIMFSGARIWVLISAIILASVGLNMNSSAVIIG
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCCCCCCHHHHH
AMLISPLMGPINGMGYSIATYDFPLLRKSFKNFSFAVISSLVASTLYFAITPVSSAHSEL
HHHHHHHHCCCCCCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
LARTSPTIYDVLVALFGGLAGAISLTTKLKGNVVPGVAIATALMPPLCTAGYGLATGHFT
HHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHCCCCCCHHHHH
FFFGALYLFTINSVFIGLANVGFARVMRIPLRSSLPEEKRTGINRIITAVILVTLIPSVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FGYVLVKKEHFIETATRFVQTVSLFKGNFLLRYDIDGDSRTISMIYAGEPLTSDDKVELG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECCCCCCCCHHHHH
RRAEKFGLEQVTLKFEQGLVISKDKEFQDKLSQMVETDRQKIEIARLNAALQANQRQQDS
HHHHHHCHHHHEEHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LRQVKYTGLKLLNELKPLFPQITSCLYAESYLFSDSTGKKPLHRSYVLLSAAKPISRVDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEECCCHHHHHHH
TKMENWLKARLQNDSLRVVFE
HHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]