| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673323
Identifier: 21673323
GI number: 21673323
Start: 502380
End: 503705
Strand: Direct
Name: 21673323
Synonym: CT0488
Alternate gene names: NA
Gene position: 502380-503705 (Clockwise)
Preceding gene: 21673322
Following gene: 21673325
Centisome position: 23.31
GC content: 52.87
Gene sequence:
>1326_bases ATGCTTAAATCTTTGCTGCGTATTCTCAGCCTGCGTCAGGATGCGGAGGCATTCGATGCCATCCACAACGCGGTCGAGGC TGATATCATGTTCAGCGGGGCGCGCATCTGGGTGCTGATTTCTGCCATTATCCTCGCCTCGGTCGGCCTCAACATGAACT CCAGCGCGGTTATCATTGGCGCCATGCTGATTTCGCCGCTCATGGGCCCGATCAACGGCATGGGCTACAGCATCGCGACC TATGATTTCCCGTTGCTCCGGAAGTCTTTCAAGAACTTCTCTTTTGCGGTGATTTCGAGTCTGGTCGCTTCAACCCTCTA TTTTGCCATCACTCCGGTATCCAGCGCTCATTCGGAGTTGCTTGCCCGCACGAGTCCCACCATCTATGATGTACTGGTCG CGCTGTTTGGCGGCTTGGCCGGGGCGATCTCCCTGACCACGAAACTCAAGGGCAACGTGGTACCGGGTGTGGCGATTGCC ACGGCGCTCATGCCACCGCTCTGCACGGCGGGCTATGGCTTGGCGACCGGCCACTTCACCTTCTTTTTTGGTGCGCTCTA CCTTTTTACAATCAATAGCGTTTTCATCGGACTTGCCAATGTCGGTTTCGCGCGAGTGATGCGGATTCCGCTACGAAGCT CTCTTCCGGAAGAGAAAAGAACCGGTATCAACCGTATCATCACGGCGGTCATTCTGGTTACACTGATCCCGAGCGTCTAT TTCGGCTATGTGCTTGTCAAGAAGGAGCATTTTATTGAAACCGCCACAAGGTTTGTTCAAACGGTCAGCCTTTTCAAAGG GAATTTTCTGCTTCGCTATGACATTGATGGCGATAGCCGCACGATTTCAATGATTTATGCCGGCGAACCGCTGACCAGTG ACGACAAGGTGGAATTGGGCAGGCGAGCGGAAAAATTCGGCCTCGAGCAGGTCACCCTGAAGTTCGAACAGGGGCTGGTA ATCAGTAAAGACAAGGAATTTCAGGATAAGCTGAGTCAAATGGTAGAGACGGATCGTCAGAAAATTGAAATCGCTCGTCT CAATGCGGCGTTGCAAGCCAATCAAAGGCAGCAAGATAGTCTCCGTCAGGTCAAATACACCGGCCTGAAACTTCTCAATG AACTCAAGCCGTTGTTTCCGCAGATTACGAGCTGCCTTTATGCTGAGTCCTATCTTTTTTCAGACAGCACGGGCAAGAAA CCTCTGCACAGAAGTTACGTTCTCCTTTCGGCGGCAAAACCCATCAGCCGGGTTGACCGCACGAAAATGGAGAACTGGCT CAAAGCCCGGTTGCAGAACGACAGCCTGCGGGTGGTGTTCGAGTGA
Upstream 100 bases:
>100_bases TTGTAGGAGGCTTCACGGAAGTTTTCCGGCACTTTCCCTGGTTTGTTTTGATTTCGGGATGCCGTGCCAGCCGCCGGTTT GATCAACTATCCTGTTAGCC
Downstream 100 bases:
>100_bases ATGTCAGCGCTTGATGGCCGCCTGGCTCTTTTTATCCGCGCTGTTTTCTTGATTGATGGAGCTGTGGGGAGGATTAACCG CAGTATTCTTTCTTCTCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MLKSLLRILSLRQDAEAFDAIHNAVEADIMFSGARIWVLISAIILASVGLNMNSSAVIIGAMLISPLMGPINGMGYSIAT YDFPLLRKSFKNFSFAVISSLVASTLYFAITPVSSAHSELLARTSPTIYDVLVALFGGLAGAISLTTKLKGNVVPGVAIA TALMPPLCTAGYGLATGHFTFFFGALYLFTINSVFIGLANVGFARVMRIPLRSSLPEEKRTGINRIITAVILVTLIPSVY FGYVLVKKEHFIETATRFVQTVSLFKGNFLLRYDIDGDSRTISMIYAGEPLTSDDKVELGRRAEKFGLEQVTLKFEQGLV ISKDKEFQDKLSQMVETDRQKIEIARLNAALQANQRQQDSLRQVKYTGLKLLNELKPLFPQITSCLYAESYLFSDSTGKK PLHRSYVLLSAAKPISRVDRTKMENWLKARLQNDSLRVVFE
Sequences:
>Translated_441_residues MLKSLLRILSLRQDAEAFDAIHNAVEADIMFSGARIWVLISAIILASVGLNMNSSAVIIGAMLISPLMGPINGMGYSIAT YDFPLLRKSFKNFSFAVISSLVASTLYFAITPVSSAHSELLARTSPTIYDVLVALFGGLAGAISLTTKLKGNVVPGVAIA TALMPPLCTAGYGLATGHFTFFFGALYLFTINSVFIGLANVGFARVMRIPLRSSLPEEKRTGINRIITAVILVTLIPSVY FGYVLVKKEHFIETATRFVQTVSLFKGNFLLRYDIDGDSRTISMIYAGEPLTSDDKVELGRRAEKFGLEQVTLKFEQGLV ISKDKEFQDKLSQMVETDRQKIEIARLNAALQANQRQQDSLRQVKYTGLKLLNELKPLFPQITSCLYAESYLFSDSTGKK PLHRSYVLLSAAKPISRVDRTKMENWLKARLQNDSLRVVFE >Mature_441_residues MLKSLLRILSLRQDAEAFDAIHNAVEADIMFSGARIWVLISAIILASVGLNMNSSAVIIGAMLISPLMGPINGMGYSIAT YDFPLLRKSFKNFSFAVISSLVASTLYFAITPVSSAHSELLARTSPTIYDVLVALFGGLAGAISLTTKLKGNVVPGVAIA TALMPPLCTAGYGLATGHFTFFFGALYLFTINSVFIGLANVGFARVMRIPLRSSLPEEKRTGINRIITAVILVTLIPSVY FGYVLVKKEHFIETATRFVQTVSLFKGNFLLRYDIDGDSRTISMIYAGEPLTSDDKVELGRRAEKFGLEQVTLKFEQGLV ISKDKEFQDKLSQMVETDRQKIEIARLNAALQANQRQQDSLRQVKYTGLKLLNELKPLFPQITSCLYAESYLFSDSTGKK PLHRSYVLLSAAKPISRVDRTKMENWLKARLQNDSLRVVFE
Specific function: Unknown
COG id: COG1808
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005233 - InterPro: IPR013031 - InterPro: IPR005240 [H]
Pfam domain/function: PF04087 DUF389 [H]
EC number: NA
Molecular weight: Translated: 48752; Mature: 48752
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKSLLRILSLRQDAEAFDAIHNAVEADIMFSGARIWVLISAIILASVGLNMNSSAVIIG CHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCCCCCCHHHHH AMLISPLMGPINGMGYSIATYDFPLLRKSFKNFSFAVISSLVASTLYFAITPVSSAHSEL HHHHHHHHCCCCCCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH LARTSPTIYDVLVALFGGLAGAISLTTKLKGNVVPGVAIATALMPPLCTAGYGLATGHFT HHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHCCCCCCHHHHH FFFGALYLFTINSVFIGLANVGFARVMRIPLRSSLPEEKRTGINRIITAVILVTLIPSVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH FGYVLVKKEHFIETATRFVQTVSLFKGNFLLRYDIDGDSRTISMIYAGEPLTSDDKVELG HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECCCCCCCCHHHHH RRAEKFGLEQVTLKFEQGLVISKDKEFQDKLSQMVETDRQKIEIARLNAALQANQRQQDS HHHHHHCHHHHEEHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LRQVKYTGLKLLNELKPLFPQITSCLYAESYLFSDSTGKKPLHRSYVLLSAAKPISRVDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEECCCHHHHHHH TKMENWLKARLQNDSLRVVFE HHHHHHHHHHHCCCCEEEEEC >Mature Secondary Structure MLKSLLRILSLRQDAEAFDAIHNAVEADIMFSGARIWVLISAIILASVGLNMNSSAVIIG CHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCCCCCCHHHHH AMLISPLMGPINGMGYSIATYDFPLLRKSFKNFSFAVISSLVASTLYFAITPVSSAHSEL HHHHHHHHCCCCCCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH LARTSPTIYDVLVALFGGLAGAISLTTKLKGNVVPGVAIATALMPPLCTAGYGLATGHFT HHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHCCCCCCHHHHH FFFGALYLFTINSVFIGLANVGFARVMRIPLRSSLPEEKRTGINRIITAVILVTLIPSVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH FGYVLVKKEHFIETATRFVQTVSLFKGNFLLRYDIDGDSRTISMIYAGEPLTSDDKVELG HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECCCCCCCCHHHHH RRAEKFGLEQVTLKFEQGLVISKDKEFQDKLSQMVETDRQKIEIARLNAALQANQRQQDS HHHHHHCHHHHEEHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LRQVKYTGLKLLNELKPLFPQITSCLYAESYLFSDSTGKKPLHRSYVLLSAAKPISRVDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEECCCHHHHHHH TKMENWLKARLQNDSLRVVFE HHHHHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]