| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673318
Identifier: 21673318
GI number: 21673318
Start: 498401
End: 499279
Strand: Direct
Name: 21673318
Synonym: CT0483
Alternate gene names: NA
Gene position: 498401-499279 (Clockwise)
Preceding gene: 21673317
Following gene: 21673319
Centisome position: 23.13
GC content: 58.93
Gene sequence:
>879_bases ATGAAGAAAGTGCTTGTGGCCGGAGCGACCGGTTACCTTGGCCGGTATGCGGTGCAGGAGTTCAAGAATCGCGGGTACTG GGTGCGCGCGCTGGTGCGCAATCCCGAGAAGTTCAAAAAGCCGGGGCCGTTTTTCGCGCCAGAGATCGACACGCTCGTTG ACGATGTGGTGTTCGGCGACGCTACCAAGCCGGAAACCATCGCCGGGCTGTGCGACGGCATCGACGTGGTTTTTTCGTCG CTCGGCATGATCAAGCCCGACTTCGAGCACGACAACTTCGACGTGGATTATCAGGGCAACATGAACATTCTCGCCGAGGC GCTGAAGGCCGGGGTGAAGAAGTTCGTGTACGTTTCGGTCTTCGACGCGCATCGCATGATGAACATCCCGAACGTGCAGG CGCACGAAAAGTTCGTCCGCGAGTTGCAGGCCGCGAAGATTGAGAGCACAATCATCCGTCCGAACGGCTTCTTTTCGGAA ATCGGCCAGTTCGTGGCCCGTGCTCGCCGCGGCTTCATGCTGTGGATTGGCGACGGCTACAACCGTCAGAACCCCATCCA CGGCGCCGACCTGGCCAAAGTGTGCGCCGATGCGGTGGACAGCAGCGAAAAAGAGATCGAAGTCGGCGGCCCGGAGGTGT TCACTTACCGTGAAATGGTCGATCTGGCTATCGAAATCGCCGGAACGCAGCCCGTACAGGTTTCACTGCCCTTCTGGCTG GCTGACGGCATCGTCGGCGTGCTGGGCCTCTTCAATCGCGATGTGCACGATGTCGCACTGTTTGCCACCACGCTCAGCAA GATGGATTTCGTTTCGCCGAAGTACGGCACCCACCGTCTGCGCGACTTCTTCAACGAGTGCAAATTGCTACCGCTGTAA
Upstream 100 bases:
>100_bases CCGCTCCTGAGATTGGCATTCCCCATTCTGCGCCCCTCGCCTGAATTGCGTATATTGCCCGTCGAAAAAGCGTTATCCAT CAACCTTATCCGAGCAATCA
Downstream 100 bases:
>100_bases GGCACCGGTTGTTATACGCGAGTGAAGCCGGATAGCCGCCGGCTTCATTTATCCGCCTTTCAACTCTTTTCAATTTGAGT CGCAAGATGCGGCAGCAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NmrA Family Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NmrA-Like Family; NAD Dependent Epimerase/Dehydratase Family Protein; NADH Dehydrogenase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; NADH-Ubiquinone Oxidoreductase; Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase; NADH Dehydrogenase/Oxidoreductase-Like Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate Sugar Epimerase; NmrA-Like; NAD Dependent Epimerase/Dehydratase; UDP-Glucose 4-Epimerase; NADH Dehydrogenase/NADH Dehydrogenase Protein; Nucleotide-Diphosphate-Sugar Epimerase; Homolog NADH Dehydrogenase; NADH-Ubiquinone Oxidoreductase Family Protein; NADH Dehydrogenase-Like Protein; Glucose/Sorbosone Dehydrogenase-Like Protein; NADH-Ubiquinone Oxidoreductase -Like Protein; NmrA-Like Family Protein; NADH-Ubiquinone Oxidoreductase Putativ; NADH-Quinone Oxidoreductase; NADH-Ubiquinone Oxidoreductase Subunit
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MKKVLVAGATGYLGRYAVQEFKNRGYWVRALVRNPEKFKKPGPFFAPEIDTLVDDVVFGDATKPETIAGLCDGIDVVFSS LGMIKPDFEHDNFDVDYQGNMNILAEALKAGVKKFVYVSVFDAHRMMNIPNVQAHEKFVRELQAAKIESTIIRPNGFFSE IGQFVARARRGFMLWIGDGYNRQNPIHGADLAKVCADAVDSSEKEIEVGGPEVFTYREMVDLAIEIAGTQPVQVSLPFWL ADGIVGVLGLFNRDVHDVALFATTLSKMDFVSPKYGTHRLRDFFNECKLLPL
Sequences:
>Translated_292_residues MKKVLVAGATGYLGRYAVQEFKNRGYWVRALVRNPEKFKKPGPFFAPEIDTLVDDVVFGDATKPETIAGLCDGIDVVFSS LGMIKPDFEHDNFDVDYQGNMNILAEALKAGVKKFVYVSVFDAHRMMNIPNVQAHEKFVRELQAAKIESTIIRPNGFFSE IGQFVARARRGFMLWIGDGYNRQNPIHGADLAKVCADAVDSSEKEIEVGGPEVFTYREMVDLAIEIAGTQPVQVSLPFWL ADGIVGVLGLFNRDVHDVALFATTLSKMDFVSPKYGTHRLRDFFNECKLLPL >Mature_292_residues MKKVLVAGATGYLGRYAVQEFKNRGYWVRALVRNPEKFKKPGPFFAPEIDTLVDDVVFGDATKPETIAGLCDGIDVVFSS LGMIKPDFEHDNFDVDYQGNMNILAEALKAGVKKFVYVSVFDAHRMMNIPNVQAHEKFVRELQAAKIESTIIRPNGFFSE IGQFVARARRGFMLWIGDGYNRQNPIHGADLAKVCADAVDSSEKEIEVGGPEVFTYREMVDLAIEIAGTQPVQVSLPFWL ADGIVGVLGLFNRDVHDVALFATTLSKMDFVSPKYGTHRLRDFFNECKLLPL
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32620; Mature: 32620
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVLVAGATGYLGRYAVQEFKNRGYWVRALVRNPEKFKKPGPFFAPEIDTLVDDVVFGD CCCEEEECCCHHHHHHHHHHHHCCCEEEEHHHCCCHHHCCCCCCCCCCHHHHHHHHHCCC ATKPETIAGLCDGIDVVFSSLGMIKPDFEHDNFDVDYQGNMNILAEALKAGVKKFVYVSV CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHEEEEEE FDAHRMMNIPNVQAHEKFVRELQAAKIESTIIRPNGFFSEIGQFVARARRGFMLWIGDGY EHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCEEEEEECCC NRQNPIHGADLAKVCADAVDSSEKEIEVGGPEVFTYREMVDLAIEIAGTQPVQVSLPFWL CCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHH ADGIVGVLGLFNRDVHDVALFATTLSKMDFVSPKYGTHRLRDFFNECKLLPL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MKKVLVAGATGYLGRYAVQEFKNRGYWVRALVRNPEKFKKPGPFFAPEIDTLVDDVVFGD CCCEEEECCCHHHHHHHHHHHHCCCEEEEHHHCCCHHHCCCCCCCCCCHHHHHHHHHCCC ATKPETIAGLCDGIDVVFSSLGMIKPDFEHDNFDVDYQGNMNILAEALKAGVKKFVYVSV CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHEEEEEE FDAHRMMNIPNVQAHEKFVRELQAAKIESTIIRPNGFFSEIGQFVARARRGFMLWIGDGY EHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCEEEEEECCC NRQNPIHGADLAKVCADAVDSSEKEIEVGGPEVFTYREMVDLAIEIAGTQPVQVSLPFWL CCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHH ADGIVGVLGLFNRDVHDVALFATTLSKMDFVSPKYGTHRLRDFFNECKLLPL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA