| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673306
Identifier: 21673306
GI number: 21673306
Start: 487937
End: 488791
Strand: Reverse
Name: 21673306
Synonym: CT0471
Alternate gene names: NA
Gene position: 488791-487937 (Counterclockwise)
Preceding gene: 21673307
Following gene: 21673305
Centisome position: 22.68
GC content: 57.43
Gene sequence:
>855_bases TTGCCCGGCGATAGCACTAATTTTATTTTCATGCTATCACCAACCACAAGCACCTTCGACATGCAGAAAAAAGCCACCCT TCTCGTCTCGGCGCTCATGCTCTCTTCGACGCCGCTCTTCGCCGCCATGCCGCTCGTAACCGACGACACCGGCACCCAGG GCGCAGGCCACGGCCAGATCGAAATCGGCTTTGAATCCACCAGCGACAAGGAAACCGAAGCGGGAGTATCGTGCAAGGAG ACCGGCGGTGCTATTTCGGCCACCTTCAGCTACGGCCTGACAGACAACATTGATCTGGTCGTTGGCCTGCCCTGGGAGTG GGACACGGTAAAAGAGAATGGCTTGAAGGTGGCTGATGAAAACGGCATTGGTGACCTCGCCCTGCAAATCAAATGGCGCT TTTACGAACTCCCGGACAGCGGCTTCAACCTCGCCATCAAACCCGGTCTCACCATCCCGACGGGTGATGAAAACAAAGGC TTCGGCACCGGCAAGGTTTCGGGCGACGTCACGCTCATCGCCACGCGCGAAGCCAAACTGGCCACCTTCCACGTCAACCT CGGTTACAGCCGTAACGCCTACAAGCTCGACGAAATCAGTGAATCATCGAGAAAAAACATCTGGCACGCCTCGATGGCCA CCGAGCTGAACGTGACCGACAAGCTCCGGGCCGTGGGCGACATCGGCATCGAAACCAATTCCGACAAGGATTCCGATACC GATCCGGCCTGGATTCTCGGCGGCCTGATCTACGCCGTCAACGACAATACCGATCTCGACATCGGCATCAAAGGCGGCCT GAATGACGCCGAAACCGACACCACGCTGCTCGCAGGCGTGACCATGCGATTCTAA
Upstream 100 bases:
>100_bases TGCTGGTCGGCGTGAAGCATCTCGACCTCTCCCTCTCCTCCGCTGATTGACAAGGCAGCGTTGAAAAGTTCTCTGCAGAA CGATTCAACACCGTTACCTG
Downstream 100 bases:
>100_bases CCAAATCACGGGAGTACGAATTATGCACATGTCAGATGCTCTGCTTTCGCCAGTTGTTGGCGGTGCGTTCTGGGCGGTCA GCGCAGGAATGATCGGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MPGDSTNFIFMLSPTTSTFDMQKKATLLVSALMLSSTPLFAAMPLVTDDTGTQGAGHGQIEIGFESTSDKETEAGVSCKE TGGAISATFSYGLTDNIDLVVGLPWEWDTVKENGLKVADENGIGDLALQIKWRFYELPDSGFNLAIKPGLTIPTGDENKG FGTGKVSGDVTLIATREAKLATFHVNLGYSRNAYKLDEISESSRKNIWHASMATELNVTDKLRAVGDIGIETNSDKDSDT DPAWILGGLIYAVNDNTDLDIGIKGGLNDAETDTTLLAGVTMRF
Sequences:
>Translated_284_residues MPGDSTNFIFMLSPTTSTFDMQKKATLLVSALMLSSTPLFAAMPLVTDDTGTQGAGHGQIEIGFESTSDKETEAGVSCKE TGGAISATFSYGLTDNIDLVVGLPWEWDTVKENGLKVADENGIGDLALQIKWRFYELPDSGFNLAIKPGLTIPTGDENKG FGTGKVSGDVTLIATREAKLATFHVNLGYSRNAYKLDEISESSRKNIWHASMATELNVTDKLRAVGDIGIETNSDKDSDT DPAWILGGLIYAVNDNTDLDIGIKGGLNDAETDTTLLAGVTMRF >Mature_283_residues PGDSTNFIFMLSPTTSTFDMQKKATLLVSALMLSSTPLFAAMPLVTDDTGTQGAGHGQIEIGFESTSDKETEAGVSCKET GGAISATFSYGLTDNIDLVVGLPWEWDTVKENGLKVADENGIGDLALQIKWRFYELPDSGFNLAIKPGLTIPTGDENKGF GTGKVSGDVTLIATREAKLATFHVNLGYSRNAYKLDEISESSRKNIWHASMATELNVTDKLRAVGDIGIETNSDKDSDTD PAWILGGLIYAVNDNTDLDIGIKGGLNDAETDTTLLAGVTMRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30375; Mature: 30244
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGDSTNFIFMLSPTTSTFDMQKKATLLVSALMLSSTPLFAAMPLVTDDTGTQGAGHGQI CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCCCEE EIGFESTSDKETEAGVSCKETGGAISATFSYGLTDNIDLVVGLPWEWDTVKENGLKVADE EEEECCCCCCCHHCCCEEHHCCCEEEEEEEECCCCCCEEEEECCCCCCCHHCCCEEEECC NGIGDLALQIKWRFYELPDSGFNLAIKPGLTIPTGDENKGFGTGKVSGDVTLIATREAKL CCCCEEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCEECCCCCCCEEEEEECCCEE ATFHVNLGYSRNAYKLDEISESSRKNIWHASMATELNVTDKLRAVGDIGIETNSDKDSDT EEEEEECCCCCCCEECHHHCCHHHCCEEEEEHEEECCCHHHHHHHEECCEECCCCCCCCC DPAWILGGLIYAVNDNTDLDIGIKGGLNDAETDTTLLAGVTMRF CCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECC >Mature Secondary Structure PGDSTNFIFMLSPTTSTFDMQKKATLLVSALMLSSTPLFAAMPLVTDDTGTQGAGHGQI CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCCCEE EIGFESTSDKETEAGVSCKETGGAISATFSYGLTDNIDLVVGLPWEWDTVKENGLKVADE EEEECCCCCCCHHCCCEEHHCCCEEEEEEEECCCCCCEEEEECCCCCCCHHCCCEEEECC NGIGDLALQIKWRFYELPDSGFNLAIKPGLTIPTGDENKGFGTGKVSGDVTLIATREAKL CCCCEEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCEECCCCCCCEEEEEECCCEE ATFHVNLGYSRNAYKLDEISESSRKNIWHASMATELNVTDKLRAVGDIGIETNSDKDSDT EEEEEECCCCCCCEECHHHCCHHHCCEEEEEHEEECCCHHHHHHHEECCEECCCCCCCCC DPAWILGGLIYAVNDNTDLDIGIKGGLNDAETDTTLLAGVTMRF CCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA