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The map label for this gene is hofQ [C]

Identifier: 21673269

GI number: 21673269

Start: 449805

End: 451142

Strand: Direct

Name: hofQ [C]

Synonym: CT0430

Alternate gene names: 21673269

Gene position: 449805-451142 (Clockwise)

Preceding gene: 21673268

Following gene: 21673270

Centisome position: 20.87

GC content: 52.24

Gene sequence:

>1338_bases
ATGGATTTTTCTGCATACGCACCTTCGAGCTATTCTGTTCCTGAAGGTGAATCCAGGGTCTACCGGCTTGCCGTGCCAGC
CAAGCGTGTTGCTGTGGGGGACCCTGCCATTGCAGATTTTATTATGATCAGCCCCTCAGAACTCTATCTGTCGGGCAAAA
AAACAGGCGCTACCAATCTTATTGTCTGGGGCAAAAACGGCAACTTCACCACTGCTCCGCTGGTTGTCAGCCGGAATGTC
AAACCCATACAGGACCTGTTGAGAGCTGTTTTGCCGAAAGAGCACGATATTCAGCTATACTCCTCAGGGGATGCCTTGGT
ATTGGCTGGTTCCGTGTCCAACGCTTTGGCTGCTGAAACCGCTATCCGCCTGGTAAAAACCTTTTTGGGGGGCACAGTTC
CGGATGTTACCCCAGAAGCCACCCTGACCAAGAAAAGCGAGGCAGCGACGGGCACATCGGGGGGAACCAGTATATCAGGC
ATGACTGGAGTCGCCAGCGCCGCAGGTATGTCTGGTGCTGCGACAGTGGCATCTTCCGGCATTCATGGTTTTATCAACCT
TCTCAAAATACGCGATCCGCAGCAGGTCCGCCTCGAAGTGCGCATTGCTGAAGTTTCGAAGTCCTACATGGAAGCTCTGG
GCTTCAGCTGGACGCAAGGCGTGGGCAGCACCGCAGGCAGCAGCCTTATGACAGGGTTTGTCAGCAACGCAACGCTCAAC
CTCCTCCTGAAGAATAGCGGAAATCTTAAGGTTGAAGCAGATAGTCAAAAAAACTGGATTAAAATGCTGGCTGAACCCAC
CATTGTCGCCATGAGTGGTCAGGAAGGGTATTTTCTGGTTGGAGGCAAAATTTATACACCTACCCCAACAGGAAACGGAG
CAGTCGACTATCAGGAACGCACCTATGGTGTAGGGTTGCGATTTACTCCTACCGTGCTGGATGCAGGCCGTATTTCGCTC
AAGGTTGCTCCCGAGGTCTCTGAGCCCGACTCGCAATTCCAATCTGCAGGAAGCCTGTATAATTTGCCTGCCTTTAAAGT
CAGTGCGGCTTCCACCACCGTTGAAATGAACGAGGGACAGAACCTTGTTATCGGCGGCCTTCTGAAAGACAAACTTACCG
AAACAATCGAGGCCGTGCCTTTGCTGGGTCAACTTCCCCTGCTCGGCGCATTGTTCCGTCACACTTCGATGGATTCTGAA
AAGGTCGAGGTCATCGTCATTGTTCGCCCGACACTGGTCAAAGCAAGCGATACCGTGCCGGAGCTTCCGACAGACAGGTT
TGTTCCGCCTGGTCCAAATAGGCTTTTTCTCGAAGGAAAACTTCAAGGCTCGAAATAA

Upstream 100 bases:

>100_bases
CCCTGCATTTGTAACTCCAAAAACCACTCCTGCGCCTGCGGCTAAAAAGGCTGCTCCTGCGTACGTGGCAAAAAAGTACT
CACGCGTACGCGCTAGTGCG

Downstream 100 bases:

>100_bases
CATGAACAGGATGCACGCAAATACCGCCGCCATGCGTCACGCGCAGGCGCCGAAGCATGCTCAATTTCAGAAGGGTGCGG
TGATGGTAGAATTTGCGTTT

Product: type II secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MDFSAYAPSSYSVPEGESRVYRLAVPAKRVAVGDPAIADFIMISPSELYLSGKKTGATNLIVWGKNGNFTTAPLVVSRNV
KPIQDLLRAVLPKEHDIQLYSSGDALVLAGSVSNALAAETAIRLVKTFLGGTVPDVTPEATLTKKSEAATGTSGGTSISG
MTGVASAAGMSGAATVASSGIHGFINLLKIRDPQQVRLEVRIAEVSKSYMEALGFSWTQGVGSTAGSSLMTGFVSNATLN
LLLKNSGNLKVEADSQKNWIKMLAEPTIVAMSGQEGYFLVGGKIYTPTPTGNGAVDYQERTYGVGLRFTPTVLDAGRISL
KVAPEVSEPDSQFQSAGSLYNLPAFKVSAASTTVEMNEGQNLVIGGLLKDKLTETIEAVPLLGQLPLLGALFRHTSMDSE
KVEVIVIVRPTLVKASDTVPELPTDRFVPPGPNRLFLEGKLQGSK

Sequences:

>Translated_445_residues
MDFSAYAPSSYSVPEGESRVYRLAVPAKRVAVGDPAIADFIMISPSELYLSGKKTGATNLIVWGKNGNFTTAPLVVSRNV
KPIQDLLRAVLPKEHDIQLYSSGDALVLAGSVSNALAAETAIRLVKTFLGGTVPDVTPEATLTKKSEAATGTSGGTSISG
MTGVASAAGMSGAATVASSGIHGFINLLKIRDPQQVRLEVRIAEVSKSYMEALGFSWTQGVGSTAGSSLMTGFVSNATLN
LLLKNSGNLKVEADSQKNWIKMLAEPTIVAMSGQEGYFLVGGKIYTPTPTGNGAVDYQERTYGVGLRFTPTVLDAGRISL
KVAPEVSEPDSQFQSAGSLYNLPAFKVSAASTTVEMNEGQNLVIGGLLKDKLTETIEAVPLLGQLPLLGALFRHTSMDSE
KVEVIVIVRPTLVKASDTVPELPTDRFVPPGPNRLFLEGKLQGSK
>Mature_445_residues
MDFSAYAPSSYSVPEGESRVYRLAVPAKRVAVGDPAIADFIMISPSELYLSGKKTGATNLIVWGKNGNFTTAPLVVSRNV
KPIQDLLRAVLPKEHDIQLYSSGDALVLAGSVSNALAAETAIRLVKTFLGGTVPDVTPEATLTKKSEAATGTSGGTSISG
MTGVASAAGMSGAATVASSGIHGFINLLKIRDPQQVRLEVRIAEVSKSYMEALGFSWTQGVGSTAGSSLMTGFVSNATLN
LLLKNSGNLKVEADSQKNWIKMLAEPTIVAMSGQEGYFLVGGKIYTPTPTGNGAVDYQERTYGVGLRFTPTVLDAGRISL
KVAPEVSEPDSQFQSAGSLYNLPAFKVSAASTTVEMNEGQNLVIGGLLKDKLTETIEAVPLLGQLPLLGALFRHTSMDSE
KVEVIVIVRPTLVKASDTVPELPTDRFVPPGPNRLFLEGKLQGSK

Specific function: Involved in the secretion of an unknown compound (Potential) [H]

COG id: COG4964

COG function: function code U; Flp pilus assembly protein, secretin CpaC

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BON domain [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=236, Percent_Identity=30.9322033898305, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI87082242, Length=180, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR004846
- InterPro:   IPR007055 [H]

Pfam domain/function: PF04972 BON; PF00263 Secretin [H]

EC number: NA

Molecular weight: Translated: 46867; Mature: 46867

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSAYAPSSYSVPEGESRVYRLAVPAKRVAVGDPAIADFIMISPSELYLSGKKTGATNL
CCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCEEEEEECCCCEEEECCCCCCCEE
IVWGKNGNFTTAPLVVSRNVKPIQDLLRAVLPKEHDIQLYSSGDALVLAGSVSNALAAET
EEECCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCHHHHHHH
AIRLVKTFLGGTVPDVTPEATLTKKSEAATGTSGGTSISGMTGVASAAGMSGAATVASSG
HHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHCC
IHGFINLLKIRDPQQVRLEVRIAEVSKSYMEALGFSWTQGVGSTAGSSLMTGFVSNATLN
HHHEEEEEEECCCCCEEEEEEEHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHCCCEEE
LLLKNSGNLKVEADSQKNWIKMLAEPTIVAMSGQEGYFLVGGKIYTPTPTGNGAVDYQER
EEEECCCCEEEEECCCHHHHHHHCCCEEEEEECCCCEEEECCEEEECCCCCCCCCCCCCH
TYGVGLRFTPTVLDAGRISLKVAPEVSEPDSQFQSAGSLYNLPAFKVSAASTTVEMNEGQ
HEECCEEECCCEECCCEEEEEECCCCCCCHHHHHHCCCEECCCCEEEECCEEEEEECCCC
NLVIGGLLKDKLTETIEAVPLLGQLPLLGALFRHTSMDSEKVEVIVIVRPTLVKASDTVP
EEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCEEECCCCCC
ELPTDRFVPPGPNRLFLEGKLQGSK
CCCCCCCCCCCCCEEEEEEEECCCC
>Mature Secondary Structure
MDFSAYAPSSYSVPEGESRVYRLAVPAKRVAVGDPAIADFIMISPSELYLSGKKTGATNL
CCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCEEEEEECCCCEEEECCCCCCCEE
IVWGKNGNFTTAPLVVSRNVKPIQDLLRAVLPKEHDIQLYSSGDALVLAGSVSNALAAET
EEECCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCHHHHHHH
AIRLVKTFLGGTVPDVTPEATLTKKSEAATGTSGGTSISGMTGVASAAGMSGAATVASSG
HHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHCC
IHGFINLLKIRDPQQVRLEVRIAEVSKSYMEALGFSWTQGVGSTAGSSLMTGFVSNATLN
HHHEEEEEEECCCCCEEEEEEEHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHCCCEEE
LLLKNSGNLKVEADSQKNWIKMLAEPTIVAMSGQEGYFLVGGKIYTPTPTGNGAVDYQER
EEEECCCCEEEEECCCHHHHHHHCCCEEEEEECCCCEEEECCEEEECCCCCCCCCCCCCH
TYGVGLRFTPTVLDAGRISLKVAPEVSEPDSQFQSAGSLYNLPAFKVSAASTTVEMNEGQ
HEECCEEECCCEECCCEEEEEECCCCCCCHHHHHHCCCEECCCCEEEECCEEEEEECCCC
NLVIGGLLKDKLTETIEAVPLLGQLPLLGALFRHTSMDSEKVEVIVIVRPTLVKASDTVP
EEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCEEECCCCCC
ELPTDRFVPPGPNRLFLEGKLQGSK
CCCCCCCCCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]