| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21673253
Identifier: 21673253
GI number: 21673253
Start: 427695
End: 428837
Strand: Direct
Name: 21673253
Synonym: CT0414
Alternate gene names: NA
Gene position: 427695-428837 (Clockwise)
Preceding gene: 21673252
Following gene: 21673254
Centisome position: 19.85
GC content: 62.9
Gene sequence:
>1143_bases ATGAAGTTAGGAGTTTTTGGCAATGCGGAAGTCCATCGCAACGGCAAGATGATTTCGGTGCGTTTTCTCGCGCCGCACCG GGTTGTTTCGACCTGCCGGGTGCATGGCGGCCTGCGCGATGACCTCGACGGTGTGTTCAACCACCAGTCGTGCGAACCGG CAGGGCACATGCGCAAAGATATGAAAACCATTGTTGCTGAACCGGAGCGCTACCATCAGAGGTTGTGCCAACGGTATGGG GTTTCGGAGCTGAGCGCATCGCTCGGTACGGCGGCCAACATGAACCACGCGGCCATCGCCACACGCTCGTTCCGCGATCT TTCGGTAACGGCAATCTGCACCGGGGGCGTGGAGGGCAACGCGGGACGTGCGGGCGACCCCGCCTCGGTCTGGGAGGGCG AGACGGGGTTCGAGCCGCTGGACAAAAAGGGCGAAGAGCTGCCGGGCACGATCAACATGATGCTGCTCATCAACCGCGAA CTGAGCCACGGTGCGATGGTGCGCAGCATCGTGACCGCGACCGAGGCCAAGAGCGCCGTATTGCAGGAGCTTGCGGTCTC GTCGCGCTACTCCGAGGGGCTGGCCACCGGCACCGGCACCGACCAGATCGCGGTGGCCTGCGCGCTGGGTGGATCGCGTC CGCTCACTAGCGCGGGCAAGCACTCCAAGCTCGGCGAACTGATCGCACAAGCGGTGATCAATGCGCTGCGTGACACGCTT TCCCGCCAGAACTCCCTGACTCCGCAGAGCCAGCGCTCGGTCTATGAGCATATCCGGCGGTTTGGTGTAAGCAAAGAGGA GGTGATGGAGATGGTTGCCGAGCGTTTGTCGCCGGATGAGAGCGAGGTGTTCAGGAAGAATTTCGGAGGCCTCGACCGCG ACTCCATGACGGTGGCCGCGGCGTGCGCGCTGGTGCATCTGTACGACAAGCACGCCTGGGGTCTCTTGCCCGACTCCTGC ATGGGCGAGATTTTCGTCATGCAGGGTGCGCTCTTCGCTGCGGCGGTTTCGCACCGGCAAGAGCGGATCGCAACGTACGC CGAACAGCTCGAAGCGGTCGGTTGGGGCGCTGGCCGGGAGGCACTGCTTTCACTTATCACAACCGCATGGGCGCTGGGGT ACGCCGACAAATGGAACGACTGA
Upstream 100 bases:
>100_bases CAGAGCTGATGCCGGGCCATACACTTCGCTACTACAGGAGGCTTGAATGACCGGGTGCGGGGGCAAGACGGATTCTTGAA TTGACATGACAATAAACGTA
Downstream 100 bases:
>100_bases ATATCGCGCTTGTCCATCTGGCCGTCCGGCACGGCGAGCCGGAGCACAACCGCCGGGAGCTGATCCGCCTCAACCGCCAG GCGGCTGAAGCTGGCGCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MKLGVFGNAEVHRNGKMISVRFLAPHRVVSTCRVHGGLRDDLDGVFNHQSCEPAGHMRKDMKTIVAEPERYHQRLCQRYG VSELSASLGTAANMNHAAIATRSFRDLSVTAICTGGVEGNAGRAGDPASVWEGETGFEPLDKKGEELPGTINMMLLINRE LSHGAMVRSIVTATEAKSAVLQELAVSSRYSEGLATGTGTDQIAVACALGGSRPLTSAGKHSKLGELIAQAVINALRDTL SRQNSLTPQSQRSVYEHIRRFGVSKEEVMEMVAERLSPDESEVFRKNFGGLDRDSMTVAAACALVHLYDKHAWGLLPDSC MGEIFVMQGALFAAAVSHRQERIATYAEQLEAVGWGAGREALLSLITTAWALGYADKWND
Sequences:
>Translated_380_residues MKLGVFGNAEVHRNGKMISVRFLAPHRVVSTCRVHGGLRDDLDGVFNHQSCEPAGHMRKDMKTIVAEPERYHQRLCQRYG VSELSASLGTAANMNHAAIATRSFRDLSVTAICTGGVEGNAGRAGDPASVWEGETGFEPLDKKGEELPGTINMMLLINRE LSHGAMVRSIVTATEAKSAVLQELAVSSRYSEGLATGTGTDQIAVACALGGSRPLTSAGKHSKLGELIAQAVINALRDTL SRQNSLTPQSQRSVYEHIRRFGVSKEEVMEMVAERLSPDESEVFRKNFGGLDRDSMTVAAACALVHLYDKHAWGLLPDSC MGEIFVMQGALFAAAVSHRQERIATYAEQLEAVGWGAGREALLSLITTAWALGYADKWND >Mature_380_residues MKLGVFGNAEVHRNGKMISVRFLAPHRVVSTCRVHGGLRDDLDGVFNHQSCEPAGHMRKDMKTIVAEPERYHQRLCQRYG VSELSASLGTAANMNHAAIATRSFRDLSVTAICTGGVEGNAGRAGDPASVWEGETGFEPLDKKGEELPGTINMMLLINRE LSHGAMVRSIVTATEAKSAVLQELAVSSRYSEGLATGTGTDQIAVACALGGSRPLTSAGKHSKLGELIAQAVINALRDTL SRQNSLTPQSQRSVYEHIRRFGVSKEEVMEMVAERLSPDESEVFRKNFGGLDRDSMTVAAACALVHLYDKHAWGLLPDSC MGEIFVMQGALFAAAVSHRQERIATYAEQLEAVGWGAGREALLSLITTAWALGYADKWND
Specific function: Unknown
COG id: COG1865
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002808 [H]
Pfam domain/function: PF01955 CbiZ [H]
EC number: NA
Molecular weight: Translated: 41112; Mature: 41112
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLGVFGNAEVHRNGKMISVRFLAPHRVVSTCRVHGGLRDDLDGVFNHQSCEPAGHMRKD CCCCCCCCCEEECCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHH MKTIVAEPERYHQRLCQRYGVSELSASLGTAANMNHAAIATRSFRDLSVTAICTGGVEGN HHHHHCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCC AGRAGDPASVWEGETGFEPLDKKGEELPGTINMMLLINRELSHGAMVRSIVTATEAKSAV CCCCCCCHHHCCCCCCCCCHHCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHH LQELAVSSRYSEGLATGTGTDQIAVACALGGSRPLTSAGKHSKLGELIAQAVINALRDTL HHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SRQNSLTPQSQRSVYEHIRRFGVSKEEVMEMVAERLSPDESEVFRKNFGGLDRDSMTVAA HHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHH ACALVHLYDKHAWGLLPDSCMGEIFVMQGALFAAAVSHRQERIATYAEQLEAVGWGAGRE HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ALLSLITTAWALGYADKWND HHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKLGVFGNAEVHRNGKMISVRFLAPHRVVSTCRVHGGLRDDLDGVFNHQSCEPAGHMRKD CCCCCCCCCEEECCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHH MKTIVAEPERYHQRLCQRYGVSELSASLGTAANMNHAAIATRSFRDLSVTAICTGGVEGN HHHHHCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCC AGRAGDPASVWEGETGFEPLDKKGEELPGTINMMLLINRELSHGAMVRSIVTATEAKSAV CCCCCCCHHHCCCCCCCCCHHCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHH LQELAVSSRYSEGLATGTGTDQIAVACALGGSRPLTSAGKHSKLGELIAQAVINALRDTL HHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SRQNSLTPQSQRSVYEHIRRFGVSKEEVMEMVAERLSPDESEVFRKNFGGLDRDSMTVAA HHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHH ACALVHLYDKHAWGLLPDSCMGEIFVMQGALFAAAVSHRQERIATYAEQLEAVGWGAGRE HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ALLSLITTAWALGYADKWND HHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]