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The map label for this gene is ydiF [H]

Identifier: 21673214

GI number: 21673214

Start: 386010

End: 387965

Strand: Reverse

Name: ydiF [H]

Synonym: CT0375

Alternate gene names: 21673214

Gene position: 387965-386010 (Counterclockwise)

Preceding gene: 21673218

Following gene: 21673210

Centisome position: 18.0

GC content: 57.31

Gene sequence:

>1956_bases
ATGCTCGAAGTACGAAATCTCTCTCTTTCAGCAGGCACCAAAGTGCTCCTGCGCAACACCTCATTCCGGATCGGCGACAA
GGATCGCGCCTCGCTGGTCGGCCTGAACGGCACTGGCAAATCCACGCTGCTGCGCCTCCTCAGCGGCCAGCTCAAGGAGG
ACGGGCCCATCAGCGAAGGGCAGATCATGAAGTCCTCGACCACCACCATCGGCTATCTGCCGCAGGAGATTTCGTTCGAA
GGCGACCTCGACAAAACCGCGCTCCAGTACGCTCTCGAAGCGAACAAAACGCTGCATGAACTTTCTGAAAAGATTTCGCG
CATGGAGCACGAGCTCGCGCTGCCCGATCAGGATCACGCGAGCGACGAGTACCACAAGCTGATCGAACGCTTCAGCGACG
CCTCGCAAGACTTCGAGCGGCTTGGCGGCTACCGGATGCAGTCCGACGCAGAGAAAATTCTCTCCGGACTCGGCTTCGGC
AGCGCGGATTTCTACAAAAAGGTGAAAGAGTTTTCCGGCGGCTGGCAAATGCGCCTGCTCATCGCCCGCTTGCTCTTGCA
AAACCCGACGCTGCTGCTGCTCGACGAACCGACAAACCACCTCGACATCGACTCGCTCCGCTGGCTCGAACAGTACCTGC
TCAACTACGAGCACAGCTACCTGATCGTCTCGCACGACCGCTTTTTCCTCGACAAGCTCACCACCAAAACGCTCGAAATC
GCCTTCAACGAAATCACCGAGTACAAGGGCAACTACAGCTTTTATGAGAAAGAAAAGGCCGAGCGATACACACTCATGAT
GTCGCGCTACGAAAACGATCTGAAAAAGATGGCCGACCTGAAGTCGTTCGTGGACCGCTTCCGCTACAAGGCCACCAAGG
CGCGGCAGGCGCAAAGCCGGTTGCGCCAGATGCAGAAACTCGAAAAGGAGTTGCAGGCGCCGGAGGAGGATCTGTCGCAG
ATTTCTTTCTCGTTCCCGAAGGCCAGACCGTCGGGCCGCGAAGTGCTCCGGCTGGAGGGAGTCTCAAAGTCGTTCACGCT
ACCGGACGGCACGACGAAAACCGTGCTCAAGAACATCGATCTCGAAATCATGCGCGGCGACCGCATCGCCATCGTCGGCT
CAAACGGTGCGGGCAAGACGACGTTTTGCAGGATTCTGGCCGACGAGATCGACTTCGAGGGCAAACGCCAGACCGGCCAC
CACGTCAGCATGAGCTACTTCGCCCAGCACCAGACCGACAATCTCGCGCCGGAAAAGAGCATCCTTCAGGAGATGATGGA
CGCAGCCCCGACCTCTGAAGCACAGCGCCGCGTGCGAGACATCCTCGGCTGCTTCCTCTTCAGCGGCGACGCGGTGGAGA
AGAAAATCGCCGTGCTCTCCGGAGGCGAAAAATCGAGGGTGGCACTCGCCAAGATTCTGCTCCAGGCCTCGAACCTGCTC
ATCATGGACGAGCCGACCAACCACCTCGACATGCGCTCCAAAGAAATGCTGATCGACTCGCTCGAAAACTACGACGGCAC
GCTGCTCATCGTCTCGCACGACCGCTACTTCCTCGACAGCCTCGTCAACAAGGTGTTCGAGATCAAGAACGGTGGAGTGC
AGGTCTATCTCGGCACTTATGCCGAATACCTCGAAAAAGCCGAAAAATCGTGGGAAGAGGAGAAAAAACAGCAGGCCGAA
GCCCAGGCCAAAGAGGAAGCCGCACGCAAAGCCGCCACGGCGAAATCTGTCGAAAAAAAACCGGCCGCGCCCAAAGCGAA
CAGCAAAAAGATCGCGGCAATCGAAAAGGAGATTCAGCGGTTGGAGGAGTCAAAAAAACAGCACGAGGATATGATGGCCC
AACCCTTATTTTACGAACAATCCGCAGAAGAGACGCACAAAGCCATCGCAGAGTACGAAGAGCTATGCAAAGAGCTGGAT
GCGCTCTACCAGTGCTGGGAGGACGAAGCGGGGTGA

Upstream 100 bases:

>100_bases
AAAAACAGCCAAAGACCGGCCACATAACCGGAATCCTTAGAGGGCATGGCGCTTTAATGAAATATCGTATCTTCAACTGC
AAACCTGAAACCGCGACTCC

Downstream 100 bases:

>100_bases
AGAAAAAAGTGGACTAAGCGGACACTGCGGACAGAACCTTCTTCCATTTGCCCACCCCGTCCACCCAATTCCCAGCTACT
TCCCAGCCAGCACCCGCAAC

Product: ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 651; Mature: 651

Protein sequence:

>651_residues
MLEVRNLSLSAGTKVLLRNTSFRIGDKDRASLVGLNGTGKSTLLRLLSGQLKEDGPISEGQIMKSSTTTIGYLPQEISFE
GDLDKTALQYALEANKTLHELSEKISRMEHELALPDQDHASDEYHKLIERFSDASQDFERLGGYRMQSDAEKILSGLGFG
SADFYKKVKEFSGGWQMRLLIARLLLQNPTLLLLDEPTNHLDIDSLRWLEQYLLNYEHSYLIVSHDRFFLDKLTTKTLEI
AFNEITEYKGNYSFYEKEKAERYTLMMSRYENDLKKMADLKSFVDRFRYKATKARQAQSRLRQMQKLEKELQAPEEDLSQ
ISFSFPKARPSGREVLRLEGVSKSFTLPDGTTKTVLKNIDLEIMRGDRIAIVGSNGAGKTTFCRILADEIDFEGKRQTGH
HVSMSYFAQHQTDNLAPEKSILQEMMDAAPTSEAQRRVRDILGCFLFSGDAVEKKIAVLSGGEKSRVALAKILLQASNLL
IMDEPTNHLDMRSKEMLIDSLENYDGTLLIVSHDRYFLDSLVNKVFEIKNGGVQVYLGTYAEYLEKAEKSWEEEKKQQAE
AQAKEEAARKAATAKSVEKKPAAPKANSKKIAAIEKEIQRLEESKKQHEDMMAQPLFYEQSAEETHKAIAEYEELCKELD
ALYQCWEDEAG

Sequences:

>Translated_651_residues
MLEVRNLSLSAGTKVLLRNTSFRIGDKDRASLVGLNGTGKSTLLRLLSGQLKEDGPISEGQIMKSSTTTIGYLPQEISFE
GDLDKTALQYALEANKTLHELSEKISRMEHELALPDQDHASDEYHKLIERFSDASQDFERLGGYRMQSDAEKILSGLGFG
SADFYKKVKEFSGGWQMRLLIARLLLQNPTLLLLDEPTNHLDIDSLRWLEQYLLNYEHSYLIVSHDRFFLDKLTTKTLEI
AFNEITEYKGNYSFYEKEKAERYTLMMSRYENDLKKMADLKSFVDRFRYKATKARQAQSRLRQMQKLEKELQAPEEDLSQ
ISFSFPKARPSGREVLRLEGVSKSFTLPDGTTKTVLKNIDLEIMRGDRIAIVGSNGAGKTTFCRILADEIDFEGKRQTGH
HVSMSYFAQHQTDNLAPEKSILQEMMDAAPTSEAQRRVRDILGCFLFSGDAVEKKIAVLSGGEKSRVALAKILLQASNLL
IMDEPTNHLDMRSKEMLIDSLENYDGTLLIVSHDRYFLDSLVNKVFEIKNGGVQVYLGTYAEYLEKAEKSWEEEKKQQAE
AQAKEEAARKAATAKSVEKKPAAPKANSKKIAAIEKEIQRLEESKKQHEDMMAQPLFYEQSAEETHKAIAEYEELCKELD
ALYQCWEDEAG
>Mature_651_residues
MLEVRNLSLSAGTKVLLRNTSFRIGDKDRASLVGLNGTGKSTLLRLLSGQLKEDGPISEGQIMKSSTTTIGYLPQEISFE
GDLDKTALQYALEANKTLHELSEKISRMEHELALPDQDHASDEYHKLIERFSDASQDFERLGGYRMQSDAEKILSGLGFG
SADFYKKVKEFSGGWQMRLLIARLLLQNPTLLLLDEPTNHLDIDSLRWLEQYLLNYEHSYLIVSHDRFFLDKLTTKTLEI
AFNEITEYKGNYSFYEKEKAERYTLMMSRYENDLKKMADLKSFVDRFRYKATKARQAQSRLRQMQKLEKELQAPEEDLSQ
ISFSFPKARPSGREVLRLEGVSKSFTLPDGTTKTVLKNIDLEIMRGDRIAIVGSNGAGKTTFCRILADEIDFEGKRQTGH
HVSMSYFAQHQTDNLAPEKSILQEMMDAAPTSEAQRRVRDILGCFLFSGDAVEKKIAVLSGGEKSRVALAKILLQASNLL
IMDEPTNHLDMRSKEMLIDSLENYDGTLLIVSHDRYFLDSLVNKVFEIKNGGVQVYLGTYAEYLEKAEKSWEEEKKQQAE
AQAKEEAARKAATAKSVEKKPAAPKANSKKIAAIEKEIQRLEESKKQHEDMMAQPLFYEQSAEETHKAIAEYEELCKELD
ALYQCWEDEAG

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=547, Percent_Identity=32.5411334552102, Blast_Score=271, Evalue=2e-72,
Organism=Homo sapiens, GI27881506, Length=559, Percent_Identity=31.484794275492, Blast_Score=254, Evalue=2e-67,
Organism=Homo sapiens, GI10947137, Length=560, Percent_Identity=31.6071428571429, Blast_Score=254, Evalue=2e-67,
Organism=Homo sapiens, GI10947135, Length=558, Percent_Identity=29.2114695340502, Blast_Score=209, Evalue=1e-53,
Organism=Homo sapiens, GI69354671, Length=558, Percent_Identity=29.2114695340502, Blast_Score=208, Evalue=1e-53,
Organism=Escherichia coli, GI1789751, Length=629, Percent_Identity=34.0222575516693, Blast_Score=358, Evalue=1e-100,
Organism=Escherichia coli, GI1787041, Length=547, Percent_Identity=34.3692870201097, Blast_Score=308, Evalue=5e-85,
Organism=Escherichia coli, GI1787182, Length=659, Percent_Identity=28.2245827010622, Blast_Score=253, Evalue=3e-68,
Organism=Escherichia coli, GI2367384, Length=562, Percent_Identity=30.0711743772242, Blast_Score=226, Evalue=3e-60,
Organism=Escherichia coli, GI1788506, Length=605, Percent_Identity=22.3140495867769, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1788225, Length=206, Percent_Identity=29.126213592233, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI87081791, Length=249, Percent_Identity=26.5060240963855, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI48995001, Length=291, Percent_Identity=27.1477663230241, Blast_Score=73, Evalue=7e-14,
Organism=Escherichia coli, GI87081709, Length=200, Percent_Identity=27.5, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1790544, Length=220, Percent_Identity=25, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1789672, Length=212, Percent_Identity=29.2452830188679, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1788165, Length=206, Percent_Identity=29.126213592233, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI145693107, Length=566, Percent_Identity=21.0247349823322, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1787758, Length=206, Percent_Identity=25.7281553398058, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786398, Length=228, Percent_Identity=25.8771929824561, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1787164, Length=209, Percent_Identity=33.0143540669856, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787029, Length=218, Percent_Identity=27.0642201834862, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1787112, Length=259, Percent_Identity=27.7992277992278, Blast_Score=63, Evalue=6e-11,
Organism=Escherichia coli, GI1787370, Length=221, Percent_Identity=24.8868778280543, Blast_Score=63, Evalue=7e-11,
Organism=Escherichia coli, GI87081834, Length=194, Percent_Identity=28.8659793814433, Blast_Score=63, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=551, Percent_Identity=34.3012704174229, Blast_Score=271, Evalue=7e-73,
Organism=Caenorhabditis elegans, GI17555318, Length=571, Percent_Identity=30.9982486865149, Blast_Score=245, Evalue=6e-65,
Organism=Caenorhabditis elegans, GI17559834, Length=564, Percent_Identity=27.8368794326241, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI17543740, Length=254, Percent_Identity=25.9842519685039, Blast_Score=68, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=547, Percent_Identity=33.0895795246801, Blast_Score=271, Evalue=2e-73,
Organism=Saccharomyces cerevisiae, GI6320874, Length=552, Percent_Identity=30.9782608695652, Blast_Score=248, Evalue=3e-66,
Organism=Saccharomyces cerevisiae, GI6325030, Length=410, Percent_Identity=27.0731707317073, Blast_Score=132, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6323278, Length=407, Percent_Identity=25.7985257985258, Blast_Score=115, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6324314, Length=305, Percent_Identity=27.5409836065574, Blast_Score=108, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24666836, Length=546, Percent_Identity=34.6153846153846, Blast_Score=300, Evalue=2e-81,
Organism=Drosophila melanogaster, GI24642252, Length=563, Percent_Identity=30.550621669627, Blast_Score=273, Evalue=3e-73,
Organism=Drosophila melanogaster, GI18859989, Length=563, Percent_Identity=30.550621669627, Blast_Score=273, Evalue=3e-73,
Organism=Drosophila melanogaster, GI24641342, Length=555, Percent_Identity=30.990990990991, Blast_Score=264, Evalue=1e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 74075; Mature: 74075

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEVRNLSLSAGTKVLLRNTSFRIGDKDRASLVGLNGTGKSTLLRLLSGQLKEDGPISEG
CCEEECCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCC
QIMKSSTTTIGYLPQEISFEGDLDKTALQYALEANKTLHELSEKISRMEHELALPDQDHA
CEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SDEYHKLIERFSDASQDFERLGGYRMQSDAEKILSGLGFGSADFYKKVKEFSGGWQMRLL
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHH
IARLLLQNPTLLLLDEPTNHLDIDSLRWLEQYLLNYEHSYLIVSHDRFFLDKLTTKTLEI
HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH
AFNEITEYKGNYSFYEKEKAERYTLMMSRYENDLKKMADLKSFVDRFRYKATKARQAQSR
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRQMQKLEKELQAPEEDLSQISFSFPKARPSGREVLRLEGVSKSFTLPDGTTKTVLKNID
HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHCC
LEIMRGDRIAIVGSNGAGKTTFCRILADEIDFEGKRQTGHHVSMSYFAQHQTDNLAPEKS
EEEEECCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHCCCCCCCHHH
ILQEMMDAAPTSEAQRRVRDILGCFLFSGDAVEKKIAVLSGGEKSRVALAKILLQASNLL
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCEE
IMDEPTNHLDMRSKEMLIDSLENYDGTLLIVSHDRYFLDSLVNKVFEIKNGGVQVYLGTY
EECCCCCCHHCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEHHHH
AEYLEKAEKSWEEEKKQQAEAQAKEEAARKAATAKSVEKKPAAPKANSKKIAAIEKEIQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
LEESKKQHEDMMAQPLFYEQSAEETHKAIAEYEELCKELDALYQCWEDEAG
HHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLEVRNLSLSAGTKVLLRNTSFRIGDKDRASLVGLNGTGKSTLLRLLSGQLKEDGPISEG
CCEEECCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCC
QIMKSSTTTIGYLPQEISFEGDLDKTALQYALEANKTLHELSEKISRMEHELALPDQDHA
CEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SDEYHKLIERFSDASQDFERLGGYRMQSDAEKILSGLGFGSADFYKKVKEFSGGWQMRLL
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHH
IARLLLQNPTLLLLDEPTNHLDIDSLRWLEQYLLNYEHSYLIVSHDRFFLDKLTTKTLEI
HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH
AFNEITEYKGNYSFYEKEKAERYTLMMSRYENDLKKMADLKSFVDRFRYKATKARQAQSR
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRQMQKLEKELQAPEEDLSQISFSFPKARPSGREVLRLEGVSKSFTLPDGTTKTVLKNID
HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHCC
LEIMRGDRIAIVGSNGAGKTTFCRILADEIDFEGKRQTGHHVSMSYFAQHQTDNLAPEKS
EEEEECCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHCCCCCCCHHH
ILQEMMDAAPTSEAQRRVRDILGCFLFSGDAVEKKIAVLSGGEKSRVALAKILLQASNLL
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCEE
IMDEPTNHLDMRSKEMLIDSLENYDGTLLIVSHDRYFLDSLVNKVFEIKNGGVQVYLGTY
EECCCCCCHHCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEHHHH
AEYLEKAEKSWEEEKKQQAEAQAKEEAARKAATAKSVEKKPAAPKANSKKIAAIEKEIQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
LEESKKQHEDMMAQPLFYEQSAEETHKAIAEYEELCKELDALYQCWEDEAG
HHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]