Click here to switch to the map view.

The map label for this gene is recJ [H]

Identifier: 21673199

GI number: 21673199

Start: 372470

End: 374176

Strand: Direct

Name: recJ [H]

Synonym: CT0360

Alternate gene names: 21673199

Gene position: 372470-374176 (Clockwise)

Preceding gene: 21673198

Following gene: 21673204

Centisome position: 17.28

GC content: 58.7

Gene sequence:

>1707_bases
ATGAAACGATACCGGTGGACATGCCTTGAACCCGAACCCACTTTGGTTCAGGCACTTTCCGAAGCGATCAACGTCAGCTC
ACCCATTGCCGCTGCGCTCGTCAATCGCGGCATTTCGAGTTTTGAGGAAGCCCGCCGGTTTTTTCGTCCTTCGCTCGACG
AAATACCGTCACCATTCCTTTTCAATGACATGAAGCGTGCCGTCGGCCGCCTGTCGAAGGCGATTTTCGGTGGTGAGAAG
ATCATGGTCTATGGTGACTACGATGTCGATGGCACCTCCGGGACTGCCATGCTTTCGCTGTTTCTTCGTGAAATGGGGGC
CGAGGTCTGTCACTATATCAATGACCGCTTCACGGAAGGTTATGGTCTTTCGGAAGCTGGCATTGCCTGGGCCTTCGAAC
AGGGGGTGTCGCTCATCGTCACGGTGGATTGCGGCATCCGCGCCATCGATGAGGTGCAGGCATGCGTTGGCAAAGGGGTC
GATGTCATCGTCTGCGATCACCACGAAGCCGGGGAGCTTCCGGCGGCGTGCGCGATTCTCAATCCGAAAGTGGAGGGCTG
CGGTTATCCTTTCCGGGAGCTTTGCGGCTGCGGCGTGGCGTTCAAGCTCATGCAGGCGATGGTTGAAGCGAGGGGGGAGA
GTCAGGATCGCTGGAGAAACTATCTCGATTTCGTGGCCGTCGCGACCGCTGCGGATATGGTGTCGCTGCAAGGGGAGAAC
CGTGCCTATCTGCGTGAAGGCCTCGAACTGATGCGGCGATCGCCCAGAGTGAGCTTTCAGGCGATGGCCGCGAACATGAA
GCTCAATCTCGCCGAGTTCAGCATGATGAACATCACCTATGGCATCGCTCCCCGAATCAATGCAGCCGGCAGGATGGAGT
CTGCTGGTGCGGCGATGCAGTGGCTGCTCTCTTCGGACGAGTCGGAGGCACGCCTTCGTGCTGCGGAGCTTGAGGCGCTG
AATGTCCGCCGCCGCCAGATCGATGCGGAAATTACGGCTCGCGCTGAAACGATGGTCGCGGGTCATTGCGCCAGTTTCTG
TTCCTCGATCGTGCTCTATGACGAAGCGTGGCACCTCGGTGTGCTCGGCATCGTCGCCTCGAAGCTGCTCGACAAATATC
AGTTGCCCACCGTCGTGATGGGCCGGATGAACGGTCTCATCAAGGGTTCGGTCAGGAGCGTCGATCAGCTCAACATCTAT
GACGTGCTGCACGAGTGCCGTGACCATCTCGAGCAGTTCGGTGGTCACCACCAGGCGGCGGGGCTGACGCTCAGGCCGGA
ACAGCTCGAAGCGTTCCGGCGCCGTTTTGACGAGGTGTGCCGCGAACTGCTGCCGGTCGAGGCCCGTCAGAAAACGCTCT
TGATCGATGCCGATCTTACGCTCGACGAGATCACCCCGAAATTCCTCAACGTGCTCGAACAGTTCGCCCCTTTCGGTTTT
TCCAACCGCGAGCCGCTTTTTACCGCCACCGGCTGCCGCCTGGTAGGCAAGCCGAAGCTCCTGCGGGAGCGGCATGTCAA
GTTCACGGTGCGCGGAGAGCAGAGCTCGTCATTCGAAGTGATTGCTTTCGACCGGCCCGATATTTTCAACGATCTCGAAG
CTCACGGTTCCGCTTCAGCCCTGCAGTTGGTCTGCATTCCCGAAAGAAATCAATGGAACGGCCGCGAATACGTGCAACTC
CGGGTGATGGATATGGCGATTGGGTAG

Upstream 100 bases:

>100_bases
CCAACGCCGCGTGATTCCGGTTTAAAAACGGTTTTTTTGTAAAGAAACGATGAATTATCCGTACATTCACCGACCATTTT
CCTGATTCAAGGATTTATTC

Downstream 100 bases:

>100_bases
AATGATGAACTGAAAAAGGAGATTGGTGAAATCTCCTTTTTTTCGTTTTACGCTGCTGTTTTTAGTGCCTCTGAAGTCGC
TGTCGTCTTTTCTTCACTCA

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MKRYRWTCLEPEPTLVQALSEAINVSSPIAAALVNRGISSFEEARRFFRPSLDEIPSPFLFNDMKRAVGRLSKAIFGGEK
IMVYGDYDVDGTSGTAMLSLFLREMGAEVCHYINDRFTEGYGLSEAGIAWAFEQGVSLIVTVDCGIRAIDEVQACVGKGV
DVIVCDHHEAGELPAACAILNPKVEGCGYPFRELCGCGVAFKLMQAMVEARGESQDRWRNYLDFVAVATAADMVSLQGEN
RAYLREGLELMRRSPRVSFQAMAANMKLNLAEFSMMNITYGIAPRINAAGRMESAGAAMQWLLSSDESEARLRAAELEAL
NVRRRQIDAEITARAETMVAGHCASFCSSIVLYDEAWHLGVLGIVASKLLDKYQLPTVVMGRMNGLIKGSVRSVDQLNIY
DVLHECRDHLEQFGGHHQAAGLTLRPEQLEAFRRRFDEVCRELLPVEARQKTLLIDADLTLDEITPKFLNVLEQFAPFGF
SNREPLFTATGCRLVGKPKLLRERHVKFTVRGEQSSSFEVIAFDRPDIFNDLEAHGSASALQLVCIPERNQWNGREYVQL
RVMDMAIG

Sequences:

>Translated_568_residues
MKRYRWTCLEPEPTLVQALSEAINVSSPIAAALVNRGISSFEEARRFFRPSLDEIPSPFLFNDMKRAVGRLSKAIFGGEK
IMVYGDYDVDGTSGTAMLSLFLREMGAEVCHYINDRFTEGYGLSEAGIAWAFEQGVSLIVTVDCGIRAIDEVQACVGKGV
DVIVCDHHEAGELPAACAILNPKVEGCGYPFRELCGCGVAFKLMQAMVEARGESQDRWRNYLDFVAVATAADMVSLQGEN
RAYLREGLELMRRSPRVSFQAMAANMKLNLAEFSMMNITYGIAPRINAAGRMESAGAAMQWLLSSDESEARLRAAELEAL
NVRRRQIDAEITARAETMVAGHCASFCSSIVLYDEAWHLGVLGIVASKLLDKYQLPTVVMGRMNGLIKGSVRSVDQLNIY
DVLHECRDHLEQFGGHHQAAGLTLRPEQLEAFRRRFDEVCRELLPVEARQKTLLIDADLTLDEITPKFLNVLEQFAPFGF
SNREPLFTATGCRLVGKPKLLRERHVKFTVRGEQSSSFEVIAFDRPDIFNDLEAHGSASALQLVCIPERNQWNGREYVQL
RVMDMAIG
>Mature_568_residues
MKRYRWTCLEPEPTLVQALSEAINVSSPIAAALVNRGISSFEEARRFFRPSLDEIPSPFLFNDMKRAVGRLSKAIFGGEK
IMVYGDYDVDGTSGTAMLSLFLREMGAEVCHYINDRFTEGYGLSEAGIAWAFEQGVSLIVTVDCGIRAIDEVQACVGKGV
DVIVCDHHEAGELPAACAILNPKVEGCGYPFRELCGCGVAFKLMQAMVEARGESQDRWRNYLDFVAVATAADMVSLQGEN
RAYLREGLELMRRSPRVSFQAMAANMKLNLAEFSMMNITYGIAPRINAAGRMESAGAAMQWLLSSDESEARLRAAELEAL
NVRRRQIDAEITARAETMVAGHCASFCSSIVLYDEAWHLGVLGIVASKLLDKYQLPTVVMGRMNGLIKGSVRSVDQLNIY
DVLHECRDHLEQFGGHHQAAGLTLRPEQLEAFRRRFDEVCRELLPVEARQKTLLIDADLTLDEITPKFLNVLEQFAPFGF
SNREPLFTATGCRLVGKPKLLRERHVKFTVRGEQSSSFEVIAFDRPDIFNDLEAHGSASALQLVCIPERNQWNGREYVQL
RVMDMAIG

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=497, Percent_Identity=32.3943661971831, Blast_Score=236, Evalue=2e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 63246; Mature: 63246

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYRWTCLEPEPTLVQALSEAINVSSPIAAALVNRGISSFEEARRFFRPSLDEIPSPFL
CCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHCCCCHH
FNDMKRAVGRLSKAIFGGEKIMVYGDYDVDGTSGTAMLSLFLREMGAEVCHYINDRFTEG
HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
YGLSEAGIAWAFEQGVSLIVTVDCGIRAIDEVQACVGKGVDVIVCDHHEAGELPAACAIL
CCCCCCCHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEE
NPKVEGCGYPFRELCGCGVAFKLMQAMVEARGESQDRWRNYLDFVAVATAADMVSLQGEN
CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
RAYLREGLELMRRSPRVSFQAMAANMKLNLAEFSMMNITYGIAPRINAAGRMESAGAAMQ
HHHHHHHHHHHHCCCCCCHHHHHHCCEEEHHHHEEHHEEECCCCCCCCCCCCHHHHHHHH
WLLSSDESEARLRAAELEALNVRRRQIDAEITARAETMVAGHCASFCSSIVLYDEAWHLG
HHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHH
VLGIVASKLLDKYQLPTVVMGRMNGLIKGSVRSVDQLNIYDVLHECRDHLEQFGGHHQAA
HHHHHHHHHHHHHCCCHHHHHHHCCCEECCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC
GLTLRPEQLEAFRRRFDEVCRELLPVEARQKTLLIDADLTLDEITPKFLNVLEQFAPFGF
CCEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHCCHHHHHHHHHHCCCCC
SNREPLFTATGCRLVGKPKLLRERHVKFTVRGEQSSSFEVIAFDRPDIFNDLEAHGSASA
CCCCCEEEECCCEECCCCHHHHHCCCEEEEECCCCCCEEEEEECCCCHHHHHHHCCCCCE
LQLVCIPERNQWNGREYVQLRVMDMAIG
EEEEEECCCCCCCCCEEEEEEEEEECCC
>Mature Secondary Structure
MKRYRWTCLEPEPTLVQALSEAINVSSPIAAALVNRGISSFEEARRFFRPSLDEIPSPFL
CCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHCCCCHH
FNDMKRAVGRLSKAIFGGEKIMVYGDYDVDGTSGTAMLSLFLREMGAEVCHYINDRFTEG
HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
YGLSEAGIAWAFEQGVSLIVTVDCGIRAIDEVQACVGKGVDVIVCDHHEAGELPAACAIL
CCCCCCCHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEE
NPKVEGCGYPFRELCGCGVAFKLMQAMVEARGESQDRWRNYLDFVAVATAADMVSLQGEN
CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
RAYLREGLELMRRSPRVSFQAMAANMKLNLAEFSMMNITYGIAPRINAAGRMESAGAAMQ
HHHHHHHHHHHHCCCCCCHHHHHHCCEEEHHHHEEHHEEECCCCCCCCCCCCHHHHHHHH
WLLSSDESEARLRAAELEALNVRRRQIDAEITARAETMVAGHCASFCSSIVLYDEAWHLG
HHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHH
VLGIVASKLLDKYQLPTVVMGRMNGLIKGSVRSVDQLNIYDVLHECRDHLEQFGGHHQAA
HHHHHHHHHHHHHCCCHHHHHHHCCCEECCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC
GLTLRPEQLEAFRRRFDEVCRELLPVEARQKTLLIDADLTLDEITPKFLNVLEQFAPFGF
CCEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHCCHHHHHHHHHHCCCCC
SNREPLFTATGCRLVGKPKLLRERHVKFTVRGEQSSSFEVIAFDRPDIFNDLEAHGSASA
CCCCCEEEECCCEECCCCHHHHHCCCEEEEECCCCCCEEEEEECCCCHHHHHHHCCCCCE
LQLVCIPERNQWNGREYVQLRVMDMAIG
EEEEEECCCCCCCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]