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The map label for this gene is yrbE [C]

Identifier: 21673166

GI number: 21673166

Start: 343786

End: 344544

Strand: Reverse

Name: yrbE [C]

Synonym: CT0327

Alternate gene names: 21673166

Gene position: 344544-343786 (Counterclockwise)

Preceding gene: 21673167

Following gene: 21673165

Centisome position: 15.99

GC content: 61.0

Gene sequence:

>759_bases
ATGCTCCGCTTCAAGGAGCTTGTGCTGACCATGCAGGAATTTTTCTATTTCGCGCTCCGGGCCTTCGCCACCCTGCCCAA
GGCGAAGCGTTACTGGCGGGACGTGCTCGACCAGGCGTTCATCTGTGGCGTCGAGTCGATCCCGATCGTGCTGGTCAGCT
CGATCTCCATCGGGGCCTTAATGTCGATGGAAGTTGGCAACCTGCTCGAAGAATTTGGTGCGAAAACGATGCTTGGTCGC
TCCACCTCGAACGCTGTGCTCCGCGAGCTCGGTCCCCTGCTAATGGGCCTCATGCTCTCGGCCCGCTACGGCGCGCGCAA
CGGCGCGGAGCTGGGCGCGATGCAGATTTCCGAGCAGATCGACGCCCTGCGCGCCTTCGGCACCGACCCGATCGCCAAAC
TCGTCATGCCGAGGCTGCTGGCCGCCCTCATCATGTTCGTGCCACTCATCGCCCTCTCCGACTTCGCCGGATTGCAAACC
GGTGCCCTCGTCGCCCAGTACTACCACAAACTCGACCCCGGCATCTTCTGGAACTCGATCTACCCGCGCCTCTTGCCGAT
GGACTTCGTCGTCAGCTTCCTCAAGGCGCCGGTCTTCGCCATCATCATCACACTGGTCAGCAGTTTCAACGGCTTCTCGG
CACGGGGCGGCACGGCGGGCGTAGGCCGATCGACCATCAAGGGTATTGTTGCTTCGTCGGGTCTGGTGCTGGTAGCCAAT
TTCTACGTCTCGAAACTCGTGTTCGACATCATGCACTGA

Upstream 100 bases:

>100_bases
TTTCATATACTTGCACCGGAACGCCGTGCTCTGCGTTTTTTGATGAATTGAACCAGTAATTATGGCAGCGACGCTCATTG
GTAACTACGTAGAAAGCAAG

Downstream 100 bases:

>100_bases
TATGATTGAACTCCGGAACGTCACACTCAGATATGGCGAAAAGGTGATTCTCGACAAGGTTTCGCTGACCGTGCAGGACA
ACACCATCAAGGCGATACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MLRFKELVLTMQEFFYFALRAFATLPKAKRYWRDVLDQAFICGVESIPIVLVSSISIGALMSMEVGNLLEEFGAKTMLGR
STSNAVLRELGPLLMGLMLSARYGARNGAELGAMQISEQIDALRAFGTDPIAKLVMPRLLAALIMFVPLIALSDFAGLQT
GALVAQYYHKLDPGIFWNSIYPRLLPMDFVVSFLKAPVFAIIITLVSSFNGFSARGGTAGVGRSTIKGIVASSGLVLVAN
FYVSKLVFDIMH

Sequences:

>Translated_252_residues
MLRFKELVLTMQEFFYFALRAFATLPKAKRYWRDVLDQAFICGVESIPIVLVSSISIGALMSMEVGNLLEEFGAKTMLGR
STSNAVLRELGPLLMGLMLSARYGARNGAELGAMQISEQIDALRAFGTDPIAKLVMPRLLAALIMFVPLIALSDFAGLQT
GALVAQYYHKLDPGIFWNSIYPRLLPMDFVVSFLKAPVFAIIITLVSSFNGFSARGGTAGVGRSTIKGIVASSGLVLVAN
FYVSKLVFDIMH
>Mature_252_residues
MLRFKELVLTMQEFFYFALRAFATLPKAKRYWRDVLDQAFICGVESIPIVLVSSISIGALMSMEVGNLLEEFGAKTMLGR
STSNAVLRELGPLLMGLMLSARYGARNGAELGAMQISEQIDALRAFGTDPIAKLVMPRLLAALIMFVPLIALSDFAGLQT
GALVAQYYHKLDPGIFWNSIYPRLLPMDFVVSFLKAPVFAIIITLVSSFNGFSARGGTAGVGRSTIKGIVASSGLVLVAN
FYVSKLVFDIMH

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=243, Percent_Identity=31.2757201646091, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 27487; Mature: 27487

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHC
>Mature Secondary Structure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HHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA