Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is yjeS [H]

Identifier: 21673161

GI number: 21673161

Start: 337947

End: 338888

Strand: Reverse

Name: yjeS [H]

Synonym: CT0322

Alternate gene names: 21673161

Gene position: 338888-337947 (Counterclockwise)

Preceding gene: 21673163

Following gene: 21673160

Centisome position: 15.73

GC content: 62.1

Gene sequence:

>942_bases
ATGTCTGAAAAGCGGCTTACAATGAAAGAAACAATCCGCCGGAAAGCCCTCAGCCTCGGCTTCTGCGCCGTCGGATTCGC
CGCCGCCGACACGCTGAATGAGGCGATGAAGGAGTACCGCGCGATGATCGACGAGGGACGGCACGGCGAGATGGGCTACC
TCGAAACAGGCCTCGAAGCTCGCGCCAATCCGGAGCTGCTTCTGCCGGGCGTCAAGAGCGTCCTTTCCGCCGCCCTGCCG
TGGCCCGCGCCCGCGAAGCCCGGCGCGATCTCCGGCTACGCCGTCATTCCGGACTACCACCGCGTCGTGGGTGAACTGCT
GAAGGAGCTGCTCGACTTCATCCGCTCGATCTGCGACCATCCGATCAACGGACAAATCTGCGTTGACAGCTCGCCAGTGC
TCGAAAAAGAGTGGGCCGAAGCCGCCGGAATCGGGCGCACCGGCAAGAACACGCTGCTTATCGTGCCCGGTTACGGCTCG
CGAGTGTTCCTCGGCGAACTGCTGCTCGACCTCGAACTTGAACCCGACACACCGCTCGACTGGAACCCCTGCGGCGACTG
CACCGCCTGCCTCGACGCCTGCCCCACCGGAGCGCTCAACACCCCCGGAAAACTCGACGCCCGGCGCTGCATTTCATACC
TGACGATAGAGCTGAAACGCGACTTCACCGACGAGGAAGCCGCGATGACCAACGGCTGGTTTTACGGCTGCGACCACTGC
CTCGACGCCTGCCCGCACAACGCAAACATCGAAGCAACAGGCTACCCCGGCTTTGAGCAAAAAAAAGAACTCGTCAACCT
GACACCAGAAAAAGCCCTCGAACTCACCCATTCGCAATTCCGAAAACGCTTCGCCGGAACCCCCGCCCTGCGCCTCGGCC
TCCGTCGCCTGAAACGCAACGCACGGGCAGCGGTTGCAAACAAGAGCCAATCAAAAAGCTGA

Upstream 100 bases:

>100_bases
AGGAATTGGTGGCGGTTCGAAAGGTTGCGAAACAACTACGTGAAGTTGACTCGTATATTTAAGAATAAATGGATGTTATC
GCAACCAATGGTGAATCGAT

Downstream 100 bases:

>100_bases
ACGATAAACATTCCAAAGGGTTTCAACCCTTCGGACATCCAGAACTTTTACATTCATATTGCCCTGGCTTTCAAGCCGGG
GTCAGCCATCAGATAAAAAA

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MSEKRLTMKETIRRKALSLGFCAVGFAAADTLNEAMKEYRAMIDEGRHGEMGYLETGLEARANPELLLPGVKSVLSAALP
WPAPAKPGAISGYAVIPDYHRVVGELLKELLDFIRSICDHPINGQICVDSSPVLEKEWAEAAGIGRTGKNTLLIVPGYGS
RVFLGELLLDLELEPDTPLDWNPCGDCTACLDACPTGALNTPGKLDARRCISYLTIELKRDFTDEEAAMTNGWFYGCDHC
LDACPHNANIEATGYPGFEQKKELVNLTPEKALELTHSQFRKRFAGTPALRLGLRRLKRNARAAVANKSQSKS

Sequences:

>Translated_313_residues
MSEKRLTMKETIRRKALSLGFCAVGFAAADTLNEAMKEYRAMIDEGRHGEMGYLETGLEARANPELLLPGVKSVLSAALP
WPAPAKPGAISGYAVIPDYHRVVGELLKELLDFIRSICDHPINGQICVDSSPVLEKEWAEAAGIGRTGKNTLLIVPGYGS
RVFLGELLLDLELEPDTPLDWNPCGDCTACLDACPTGALNTPGKLDARRCISYLTIELKRDFTDEEAAMTNGWFYGCDHC
LDACPHNANIEATGYPGFEQKKELVNLTPEKALELTHSQFRKRFAGTPALRLGLRRLKRNARAAVANKSQSKS
>Mature_312_residues
SEKRLTMKETIRRKALSLGFCAVGFAAADTLNEAMKEYRAMIDEGRHGEMGYLETGLEARANPELLLPGVKSVLSAALPW
PAPAKPGAISGYAVIPDYHRVVGELLKELLDFIRSICDHPINGQICVDSSPVLEKEWAEAAGIGRTGKNTLLIVPGYGSR
VFLGELLLDLELEPDTPLDWNPCGDCTACLDACPTGALNTPGKLDARRCISYLTIELKRDFTDEEAAMTNGWFYGCDHCL
DACPHNANIEATGYPGFEQKKELVNLTPEKALELTHSQFRKRFAGTPALRLGLRRLKRNARAAVANKSQSKS

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=310, Percent_Identity=37.4193548387097, Blast_Score=179, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013542
- InterPro:   IPR009051 [H]

Pfam domain/function: PF08331 DUF1730 [H]

EC number: NA

Molecular weight: Translated: 34277; Mature: 34145

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKRLTMKETIRRKALSLGFCAVGFAAADTLNEAMKEYRAMIDEGRHGEMGYLETGLEA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCC
RANPELLLPGVKSVLSAALPWPAPAKPGAISGYAVIPDYHRVVGELLKELLDFIRSICDH
CCCCCEECHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCC
PINGQICVDSSPVLEKEWAEAAGIGRTGKNTLLIVPGYGSRVFLGELLLDLELEPDTPLD
CCCCEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHEECCCCCCCC
WNPCGDCTACLDACPTGALNTPGKLDARRCISYLTIELKRDFTDEEAAMTNGWFYGCDHC
CCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHH
LDACPHNANIEATGYPGFEQKKELVNLTPEKALELTHSQFRKRFAGTPALRLGLRRLKRN
HHHCCCCCCEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ARAAVANKSQSKS
HHHHHHCCCCCCC
>Mature Secondary Structure 
SEKRLTMKETIRRKALSLGFCAVGFAAADTLNEAMKEYRAMIDEGRHGEMGYLETGLEA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCC
RANPELLLPGVKSVLSAALPWPAPAKPGAISGYAVIPDYHRVVGELLKELLDFIRSICDH
CCCCCEECHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCC
PINGQICVDSSPVLEKEWAEAAGIGRTGKNTLLIVPGYGSRVFLGELLLDLELEPDTPLD
CCCCEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHEECCCCCCCC
WNPCGDCTACLDACPTGALNTPGKLDARRCISYLTIELKRDFTDEEAAMTNGWFYGCDHC
CCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHH
LDACPHNANIEATGYPGFEQKKELVNLTPEKALELTHSQFRKRFAGTPALRLGLRRLKRN
HHHCCCCCCEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ARAAVANKSQSKS
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]