| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is yjeS [H]
Identifier: 21673161
GI number: 21673161
Start: 337947
End: 338888
Strand: Reverse
Name: yjeS [H]
Synonym: CT0322
Alternate gene names: 21673161
Gene position: 338888-337947 (Counterclockwise)
Preceding gene: 21673163
Following gene: 21673160
Centisome position: 15.73
GC content: 62.1
Gene sequence:
>942_bases ATGTCTGAAAAGCGGCTTACAATGAAAGAAACAATCCGCCGGAAAGCCCTCAGCCTCGGCTTCTGCGCCGTCGGATTCGC CGCCGCCGACACGCTGAATGAGGCGATGAAGGAGTACCGCGCGATGATCGACGAGGGACGGCACGGCGAGATGGGCTACC TCGAAACAGGCCTCGAAGCTCGCGCCAATCCGGAGCTGCTTCTGCCGGGCGTCAAGAGCGTCCTTTCCGCCGCCCTGCCG TGGCCCGCGCCCGCGAAGCCCGGCGCGATCTCCGGCTACGCCGTCATTCCGGACTACCACCGCGTCGTGGGTGAACTGCT GAAGGAGCTGCTCGACTTCATCCGCTCGATCTGCGACCATCCGATCAACGGACAAATCTGCGTTGACAGCTCGCCAGTGC TCGAAAAAGAGTGGGCCGAAGCCGCCGGAATCGGGCGCACCGGCAAGAACACGCTGCTTATCGTGCCCGGTTACGGCTCG CGAGTGTTCCTCGGCGAACTGCTGCTCGACCTCGAACTTGAACCCGACACACCGCTCGACTGGAACCCCTGCGGCGACTG CACCGCCTGCCTCGACGCCTGCCCCACCGGAGCGCTCAACACCCCCGGAAAACTCGACGCCCGGCGCTGCATTTCATACC TGACGATAGAGCTGAAACGCGACTTCACCGACGAGGAAGCCGCGATGACCAACGGCTGGTTTTACGGCTGCGACCACTGC CTCGACGCCTGCCCGCACAACGCAAACATCGAAGCAACAGGCTACCCCGGCTTTGAGCAAAAAAAAGAACTCGTCAACCT GACACCAGAAAAAGCCCTCGAACTCACCCATTCGCAATTCCGAAAACGCTTCGCCGGAACCCCCGCCCTGCGCCTCGGCC TCCGTCGCCTGAAACGCAACGCACGGGCAGCGGTTGCAAACAAGAGCCAATCAAAAAGCTGA
Upstream 100 bases:
>100_bases AGGAATTGGTGGCGGTTCGAAAGGTTGCGAAACAACTACGTGAAGTTGACTCGTATATTTAAGAATAAATGGATGTTATC GCAACCAATGGTGAATCGAT
Downstream 100 bases:
>100_bases ACGATAAACATTCCAAAGGGTTTCAACCCTTCGGACATCCAGAACTTTTACATTCATATTGCCCTGGCTTTCAAGCCGGG GTCAGCCATCAGATAAAAAA
Product: iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MSEKRLTMKETIRRKALSLGFCAVGFAAADTLNEAMKEYRAMIDEGRHGEMGYLETGLEARANPELLLPGVKSVLSAALP WPAPAKPGAISGYAVIPDYHRVVGELLKELLDFIRSICDHPINGQICVDSSPVLEKEWAEAAGIGRTGKNTLLIVPGYGS RVFLGELLLDLELEPDTPLDWNPCGDCTACLDACPTGALNTPGKLDARRCISYLTIELKRDFTDEEAAMTNGWFYGCDHC LDACPHNANIEATGYPGFEQKKELVNLTPEKALELTHSQFRKRFAGTPALRLGLRRLKRNARAAVANKSQSKS
Sequences:
>Translated_313_residues MSEKRLTMKETIRRKALSLGFCAVGFAAADTLNEAMKEYRAMIDEGRHGEMGYLETGLEARANPELLLPGVKSVLSAALP WPAPAKPGAISGYAVIPDYHRVVGELLKELLDFIRSICDHPINGQICVDSSPVLEKEWAEAAGIGRTGKNTLLIVPGYGS RVFLGELLLDLELEPDTPLDWNPCGDCTACLDACPTGALNTPGKLDARRCISYLTIELKRDFTDEEAAMTNGWFYGCDHC LDACPHNANIEATGYPGFEQKKELVNLTPEKALELTHSQFRKRFAGTPALRLGLRRLKRNARAAVANKSQSKS >Mature_312_residues SEKRLTMKETIRRKALSLGFCAVGFAAADTLNEAMKEYRAMIDEGRHGEMGYLETGLEARANPELLLPGVKSVLSAALPW PAPAKPGAISGYAVIPDYHRVVGELLKELLDFIRSICDHPINGQICVDSSPVLEKEWAEAAGIGRTGKNTLLIVPGYGSR VFLGELLLDLELEPDTPLDWNPCGDCTACLDACPTGALNTPGKLDARRCISYLTIELKRDFTDEEAAMTNGWFYGCDHCL DACPHNANIEATGYPGFEQKKELVNLTPEKALELTHSQFRKRFAGTPALRLGLRRLKRNARAAVANKSQSKS
Specific function: Unknown
COG id: COG1600
COG function: function code C; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790608, Length=310, Percent_Identity=37.4193548387097, Blast_Score=179, Evalue=1e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004453 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013542 - InterPro: IPR009051 [H]
Pfam domain/function: PF08331 DUF1730 [H]
EC number: NA
Molecular weight: Translated: 34277; Mature: 34145
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKRLTMKETIRRKALSLGFCAVGFAAADTLNEAMKEYRAMIDEGRHGEMGYLETGLEA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCC RANPELLLPGVKSVLSAALPWPAPAKPGAISGYAVIPDYHRVVGELLKELLDFIRSICDH CCCCCEECHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCC PINGQICVDSSPVLEKEWAEAAGIGRTGKNTLLIVPGYGSRVFLGELLLDLELEPDTPLD CCCCEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHEECCCCCCCC WNPCGDCTACLDACPTGALNTPGKLDARRCISYLTIELKRDFTDEEAAMTNGWFYGCDHC CCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHH LDACPHNANIEATGYPGFEQKKELVNLTPEKALELTHSQFRKRFAGTPALRLGLRRLKRN HHHCCCCCCEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ARAAVANKSQSKS HHHHHHCCCCCCC >Mature Secondary Structure SEKRLTMKETIRRKALSLGFCAVGFAAADTLNEAMKEYRAMIDEGRHGEMGYLETGLEA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCC RANPELLLPGVKSVLSAALPWPAPAKPGAISGYAVIPDYHRVVGELLKELLDFIRSICDH CCCCCEECHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCC PINGQICVDSSPVLEKEWAEAAGIGRTGKNTLLIVPGYGSRVFLGELLLDLELEPDTPLD CCCCEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHEECCCCCCCC WNPCGDCTACLDACPTGALNTPGKLDARRCISYLTIELKRDFTDEEAAMTNGWFYGCDHC CCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHH LDACPHNANIEATGYPGFEQKKELVNLTPEKALELTHSQFRKRFAGTPALRLGLRRLKRN HHHCCCCCCEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ARAAVANKSQSKS HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]