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The map label for this gene is rimP

Identifier: 21673078

GI number: 21673078

Start: 249874

End: 250395

Strand: Direct

Name: rimP

Synonym: CT0239

Alternate gene names: 21673078

Gene position: 249874-250395 (Clockwise)

Preceding gene: 21673076

Following gene: 21673079

Centisome position: 11.6

GC content: 57.47

Gene sequence:

>522_bases
ATGACGGATGATTTGATAAAGAAGGCGATTGGCGAAACGATCGGTGAACTCTCTGCCACAAGCGGTGAAGAGATTTACGT
TGTCGAAGCTGCCATTCGCGCGGGCGGCAGGAAAATCGAACTGACCGTCGATACCGACAAAGGGGTCAGCATCGATCAGT
GTGCAAAGCTAAGCCGGGCCATCAGGGCGCGTCTTGAAGCGTGCGAAGAGGATAGCATGCTTTCGAGCGGAGAGTTCGAT
CTCATGGTTTCATCTCCCGGTATTGGCGAGCCGATCCAGGTGCAGCGTCAGTACTTGCGGCATCTGGGCCGTTTGATCCG
GGTGAACTACCTCGACGAAGAGGAGCAGCCGAAGGAGATTACGGGCAAGTTGCTCGAAGCCGCCGTCGGGCCCGAAGCCG
AGCAGCCATCGATCACCATCGAAGCCGTCAAAGAGGGGCGAAAAAAGAGAACCGCCGGAGAGCCGCCGGTGACGATTCGC
CTTGCCGATGTCGTCAGGGCGGTGGTGCAGACCGAGTTGTAA

Upstream 100 bases:

>100_bases
TGTAAGTCATTGGAGCACTAGTCTGTTAAAAGCAAAGTTTCTGAAAGTGGGGGATCCCCACTTTTTTGTTTTCGGAAATT
CGAGCGAAGCAATTGATGCG

Downstream 100 bases:

>100_bases
TAAGTTATAGTTCCGTGAAGTGCAAGAACGAATCGCAGACTATTTTATATCAATAAAGATCACACAGCGATGCCAAGAAA
GCAGCTAAAGGGTGAAACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MTDDLIKKAIGETIGELSATSGEEIYVVEAAIRAGGRKIELTVDTDKGVSIDQCAKLSRAIRARLEACEEDSMLSSGEFD
LMVSSPGIGEPIQVQRQYLRHLGRLIRVNYLDEEEQPKEITGKLLEAAVGPEAEQPSITIEAVKEGRKKRTAGEPPVTIR
LADVVRAVVQTEL

Sequences:

>Translated_173_residues
MTDDLIKKAIGETIGELSATSGEEIYVVEAAIRAGGRKIELTVDTDKGVSIDQCAKLSRAIRARLEACEEDSMLSSGEFD
LMVSSPGIGEPIQVQRQYLRHLGRLIRVNYLDEEEQPKEITGKLLEAAVGPEAEQPSITIEAVKEGRKKRTAGEPPVTIR
LADVVRAVVQTEL
>Mature_172_residues
TDDLIKKAIGETIGELSATSGEEIYVVEAAIRAGGRKIELTVDTDKGVSIDQCAKLSRAIRARLEACEEDSMLSSGEFDL
MVSSPGIGEPIQVQRQYLRHLGRLIRVNYLDEEEQPKEITGKLLEAAVGPEAEQPSITIEAVKEGRKKRTAGEPPVTIRL
ADVVRAVVQTEL

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_CHLTE (Q8KFT3)

Other databases:

- EMBL:   AE006470
- RefSeq:   NP_661143.1
- ProteinModelPortal:   Q8KFT3
- SMR:   Q8KFT3
- GeneID:   1007727
- GenomeReviews:   AE006470_GR
- KEGG:   cte:CT0239
- NMPDR:   fig|194439.1.peg.237
- TIGR:   CT0239
- HOGENOM:   HBG405620
- OMA:   PGIGEPI
- ProtClustDB:   CLSK2393804
- BioCyc:   CTEP194439:CT_0239-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 18872; Mature: 18741

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDDLIKKAIGETIGELSATSGEEIYVVEAAIRAGGRKIELTVDTDKGVSIDQCAKLSRA
CCHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHCCCEEEEEEEECCCCCCHHHHHHHHHH
IRARLEACEEDSMLSSGEFDLMVSSPGIGEPIQVQRQYLRHLGRLIRVNYLDEEEQPKEI
HHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
TGKLLEAAVGPEAEQPSITIEAVKEGRKKRTAGEPPVTIRLADVVRAVVQTEL
HHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCC
>Mature Secondary Structure 
TDDLIKKAIGETIGELSATSGEEIYVVEAAIRAGGRKIELTVDTDKGVSIDQCAKLSRA
CHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHCCCEEEEEEEECCCCCCHHHHHHHHHH
IRARLEACEEDSMLSSGEFDLMVSSPGIGEPIQVQRQYLRHLGRLIRVNYLDEEEQPKEI
HHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
TGKLLEAAVGPEAEQPSITIEAVKEGRKKRTAGEPPVTIRLADVVRAVVQTEL
HHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901