| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673062
Identifier: 21673062
GI number: 21673062
Start: 237622
End: 238236
Strand: Direct
Name: 21673062
Synonym: CT0222
Alternate gene names: NA
Gene position: 237622-238236 (Clockwise)
Preceding gene: 21673057
Following gene: 21673068
Centisome position: 11.03
GC content: 56.42
Gene sequence:
>615_bases ATGAGTCCGGATGTGATCCATCCTAAAGAGTTCAGGGAAGGGGTGCCGGATAGAGCGTTGAATCAGCGGCAGTTTCAGAT GGTCCTCGCCTCGCGGCCCGAAAAAATGATTCTGACAAGAACCGGTCATTTTGAATTTCTGAAGGAGACGCTTGCCGGGG CCGGGTTCAAATCTCCCATGGAGGCTGTTTCGGCGCAAGAGCGGCGAGCGCTTGTCGGCAAAATCAGCGGCTGTTATGAT CCGATTGTCACGAGCGATTTTTTCCGGCTGCCGCTGGACAGGAAAATCCGCTACGCCGGTTCGCTGGCAAGCACTTTCCT GAAGCGTCTGCTCAATAAGCGCAAAGATTGCGGGGCTGTTTTCAGGCCATCGACGGGCATTCTCGCGCTCGTTTTCGCCA TCGCCGAACATGGCCGGACTGCTGACTACGTCATTTGCGGTATTGGCGTCCGGAAAAGGAACGAATACCTCAGCGGCAAG CAGGTGAAGGGGCATGATCTTCCGCATCATGTTTTCGCCGATGTCAAGGTGCTCCGCAAGCTGGCCCGCCGCTACAATCT TTTCACCACCGAGCCGGAGCTGGAGCACCTCGTTCCGCGTTACCGCTCCGGTTGA
Upstream 100 bases:
>100_bases GAACGCGGATATTCCTCTGGGAGACGCGGTCTATTGCGCTAACGCCGCCATCGGTTATTACGCAGAGATGGTCAGCCGAT TTCCGCGCGTGGTGAGTGTT
Downstream 100 bases:
>100_bases GCGCTCGCCGCGATTGCTCCGTTTTCCTCGGGAGCTTTATGGCCTTTGCTGTCGTCATCGCGAGCCATCCCGACAAGTCG GGACACGATACCCCGCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MSPDVIHPKEFREGVPDRALNQRQFQMVLASRPEKMILTRTGHFEFLKETLAGAGFKSPMEAVSAQERRALVGKISGCYD PIVTSDFFRLPLDRKIRYAGSLASTFLKRLLNKRKDCGAVFRPSTGILALVFAIAEHGRTADYVICGIGVRKRNEYLSGK QVKGHDLPHHVFADVKVLRKLARRYNLFTTEPELEHLVPRYRSG
Sequences:
>Translated_204_residues MSPDVIHPKEFREGVPDRALNQRQFQMVLASRPEKMILTRTGHFEFLKETLAGAGFKSPMEAVSAQERRALVGKISGCYD PIVTSDFFRLPLDRKIRYAGSLASTFLKRLLNKRKDCGAVFRPSTGILALVFAIAEHGRTADYVICGIGVRKRNEYLSGK QVKGHDLPHHVFADVKVLRKLARRYNLFTTEPELEHLVPRYRSG >Mature_203_residues SPDVIHPKEFREGVPDRALNQRQFQMVLASRPEKMILTRTGHFEFLKETLAGAGFKSPMEAVSAQERRALVGKISGCYDP IVTSDFFRLPLDRKIRYAGSLASTFLKRLLNKRKDCGAVFRPSTGILALVFAIAEHGRTADYVICGIGVRKRNEYLSGKQ VKGHDLPHHVFADVKVLRKLARRYNLFTTEPELEHLVPRYRSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23125; Mature: 22994
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPDVIHPKEFREGVPDRALNQRQFQMVLASRPEKMILTRTGHFEFLKETLAGAGFKSPM CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCHH EAVSAQERRALVGKISGCYDPIVTSDFFRLPLDRKIRYAGSLASTFLKRLLNKRKDCGAV HHHHHHHHHHHHHHHHHHHCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCE FRPSTGILALVFAIAEHGRTADYVICGIGVRKRNEYLSGKQVKGHDLPHHVFADVKVLRK ECCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH LARRYNLFTTEPELEHLVPRYRSG HHHHHCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SPDVIHPKEFREGVPDRALNQRQFQMVLASRPEKMILTRTGHFEFLKETLAGAGFKSPM CCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCHH EAVSAQERRALVGKISGCYDPIVTSDFFRLPLDRKIRYAGSLASTFLKRLLNKRKDCGAV HHHHHHHHHHHHHHHHHHHCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCE FRPSTGILALVFAIAEHGRTADYVICGIGVRKRNEYLSGKQVKGHDLPHHVFADVKVLRK ECCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH LARRYNLFTTEPELEHLVPRYRSG HHHHHCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA