Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is 21673008

Identifier: 21673008

GI number: 21673008

Start: 175757

End: 176020

Strand: Direct

Name: 21673008

Synonym: CT0167

Alternate gene names: NA

Gene position: 175757-176020 (Clockwise)

Preceding gene: 21673007

Following gene: 21673009

Centisome position: 8.16

GC content: 58.33

Gene sequence:

>264_bases
GTGCCGCGCGAGGAGATTCCGTGGTTTCCGGTCATCAAGCCGGAGCTTTGCAACGGCTGCGGCGACTGCAAGGTGCTTTG
CAAACCCGGTGTCTTCGAGCTTGGAGAACCCGACCCGACCGGCATTCACCGCCCGAAACTCATCGTTGCCCACCCCATGA
ACTGCCTCGTTCTCTGCGACCGCTGCGTTCCCATCTGCACCTCCGGCGCGATTGTCCTGCCAAAGAAAGAGGATTTTGAG
AAGTATGTGGAGTATCTGGATTAG

Upstream 100 bases:

>100_bases
CGATCCGGACAACTCCTGGAAAAAAGCGGTGGACGCGACGCTTGCCGGAAAGTCACCGACGGCGAGCAAGGCATCGGCGA
AGCGCAAAAAGCGCCTGCTC

Downstream 100 bases:

>100_bases
TTGAAAGTTGATAATTGATAATCGGGAGGGGTATGAGGAAACGATTGCTTGCGCCGAGGGAGGAGATTGCGTGGTATCCG
GCTATCGATGCGGACATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MPREEIPWFPVIKPELCNGCGDCKVLCKPGVFELGEPDPTGIHRPKLIVAHPMNCLVLCDRCVPICTSGAIVLPKKEDFE
KYVEYLD

Sequences:

>Translated_87_residues
MPREEIPWFPVIKPELCNGCGDCKVLCKPGVFELGEPDPTGIHRPKLIVAHPMNCLVLCDRCVPICTSGAIVLPKKEDFE
KYVEYLD
>Mature_86_residues
PREEIPWFPVIKPELCNGCGDCKVLCKPGVFELGEPDPTGIHRPKLIVAHPMNCLVLCDRCVPICTSGAIVLPKKEDFEK
YVEYLD

Specific function: Unknown

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9756; Mature: 9624

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
11.5 %Cys+Met (Translated Protein)
9.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
10.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPREEIPWFPVIKPELCNGCGDCKVLCKPGVFELGEPDPTGIHRPKLIVAHPMNCLVLCD
CCCCCCCCCCCCCHHHCCCCCCCEEEECCCCEECCCCCCCCCCCCEEEEECCCCHHHHHH
RCVPICTSGAIVLPKKEDFEKYVEYLD
CCCCCCCCCCEEECCHHHHHHHHHHCC
>Mature Secondary Structure 
PREEIPWFPVIKPELCNGCGDCKVLCKPGVFELGEPDPTGIHRPKLIVAHPMNCLVLCD
CCCCCCCCCCCCHHHCCCCCCCEEEECCCCEECCCCCCCCCCCCEEEEECCCCHHHHHH
RCVPICTSGAIVLPKKEDFEKYVEYLD
CCCCCCCCCCEEECCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA