| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21672978
Identifier: 21672978
GI number: 21672978
Start: 131515
End: 132798
Strand: Direct
Name: 21672978
Synonym: CT0137
Alternate gene names: NA
Gene position: 131515-132798 (Clockwise)
Preceding gene: 21672977
Following gene: 21672979
Centisome position: 6.1
GC content: 60.51
Gene sequence:
>1284_bases ATGCCTGAAATCGCGCCGTTCAAGGGGATTGTTTACGGCCCCGATCTCTCCGGGGATGCAGCAAACCTGATTTGCCCGCC ATACGACGCCATCCCGCCAGCTATGCAGCAGGAGCTGTATGCGCGTTCCGATTACAATGCCGTGCGGCTTGAGCTGCCGT CCGAGGCCGATCCCTACGCTGCTGCGTCGAGTCGCCTGCGCGAGTGGCTGGTTTCCGGCGTTCTCGCGCAGGACGGCGAG CCTGCGCTCTATCCCTGCTTCCAGACCTTTGAGGACGAGCATGGTGTGACCCGCACCCGAAAAGGAGTGTTTGTCGCGCT CAGGCTGTACGATTTCTCCGAGGGTGAGGTGCTGCCGCACGAGCGCACGCTGTCGGGACCGAAGGCCGACCGGCTGAAGA TGTTCCGCGAGACAGGGGCGAATATCAGCAGCATTTTTGGCCTGTATGCTGATTCCTCCCGCCGGGCTGATGAAGCGATC AGCGAGTTCGCTGAACGGAACGCACCGTTGATCGACGCCACCCTCCAGGGCGTGCGCAACCGGCTGTGGCGCGTCGCCGA TCCCGCGCTGATTTCCGTTGCGCAGTCGGTACTTGCAGAACAGAAAGTCTACATCGCCGATGGGCATCACCGCTACGAAA CCGGCATCGCGTACCGGAACGAGCGGGCGGCCTCGAATCCCGGTCATACCGGTCGGGAGCCATATAATTATATCATGACC TACCTGTCGAACATTTACGACGATGGGCTCCTGATTCTGCCGATTCACCGTCTCGTGCACGGTATCGAGTCGTTCGATCC GGAAAGTTTCATCGCCCAGCTCGACCGCTGGTTCACCGTATGGGAGCTGCCCGGCAGAAGCGCTCTCGACGAGTTTCTCG AGACGGGCGATTCGGCAAAGGTTTTTGGCATCGTGCTGCCCGGCATGGTGCTCGGCATTTCGCTTGATCCGAAACCTTCC GAGGTGCTTTCGACGCCGGTGCCGGAAGCGTTGCAGAGCCTCGATGTGGTGGTGCTGCATGATCTGGTGCTCGGTCAGAT TCTCGGCATTTCATCCGAGGCGATGGCGCGCCAGAGCAACCTCACCTACACGAGCAAAACGGCCGATGTGTTCGAGGCTG TGGTGTCGGGCAAGGCGCAGCTCGGCATTGTGCTTCGTTCCGTTCGGGTCGAGCAGGTGATCGATGTCTCTGTTTCGGGC GAGGCGATGCCGCAGAAGTCCACCTGGTTCTACCCGAAGGTGATGACCGGCATGGTGTTCCATTCACTGGAGACGGAGGC ATGA
Upstream 100 bases:
>100_bases TGCCGTAACCGGAAAATCTCCGTCATCGTCAAGGAGGGCGTCAACGATTTCTGGATTTCACAGAGAGACCATGCCGAATA ACCTTTAAACTCCATAAGCC
Downstream 100 bases:
>100_bases GGGGAGAGTTTTTGTCGAGGTCGGCGGATGAAACGCGCGAATATGCCCGGAGGTTCGCTTCCGGGCTGAAACCTGGTGAT ACGGTGTGCCTGACCGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MPEIAPFKGIVYGPDLSGDAANLICPPYDAIPPAMQQELYARSDYNAVRLELPSEADPYAAASSRLREWLVSGVLAQDGE PALYPCFQTFEDEHGVTRTRKGVFVALRLYDFSEGEVLPHERTLSGPKADRLKMFRETGANISSIFGLYADSSRRADEAI SEFAERNAPLIDATLQGVRNRLWRVADPALISVAQSVLAEQKVYIADGHHRYETGIAYRNERAASNPGHTGREPYNYIMT YLSNIYDDGLLILPIHRLVHGIESFDPESFIAQLDRWFTVWELPGRSALDEFLETGDSAKVFGIVLPGMVLGISLDPKPS EVLSTPVPEALQSLDVVVLHDLVLGQILGISSEAMARQSNLTYTSKTADVFEAVVSGKAQLGIVLRSVRVEQVIDVSVSG EAMPQKSTWFYPKVMTGMVFHSLETEA
Sequences:
>Translated_427_residues MPEIAPFKGIVYGPDLSGDAANLICPPYDAIPPAMQQELYARSDYNAVRLELPSEADPYAAASSRLREWLVSGVLAQDGE PALYPCFQTFEDEHGVTRTRKGVFVALRLYDFSEGEVLPHERTLSGPKADRLKMFRETGANISSIFGLYADSSRRADEAI SEFAERNAPLIDATLQGVRNRLWRVADPALISVAQSVLAEQKVYIADGHHRYETGIAYRNERAASNPGHTGREPYNYIMT YLSNIYDDGLLILPIHRLVHGIESFDPESFIAQLDRWFTVWELPGRSALDEFLETGDSAKVFGIVLPGMVLGISLDPKPS EVLSTPVPEALQSLDVVVLHDLVLGQILGISSEAMARQSNLTYTSKTADVFEAVVSGKAQLGIVLRSVRVEQVIDVSVSG EAMPQKSTWFYPKVMTGMVFHSLETEA >Mature_426_residues PEIAPFKGIVYGPDLSGDAANLICPPYDAIPPAMQQELYARSDYNAVRLELPSEADPYAAASSRLREWLVSGVLAQDGEP ALYPCFQTFEDEHGVTRTRKGVFVALRLYDFSEGEVLPHERTLSGPKADRLKMFRETGANISSIFGLYADSSRRADEAIS EFAERNAPLIDATLQGVRNRLWRVADPALISVAQSVLAEQKVYIADGHHRYETGIAYRNERAASNPGHTGREPYNYIMTY LSNIYDDGLLILPIHRLVHGIESFDPESFIAQLDRWFTVWELPGRSALDEFLETGDSAKVFGIVLPGMVLGISLDPKPSE VLSTPVPEALQSLDVVVLHDLVLGQILGISSEAMARQSNLTYTSKTADVFEAVVSGKAQLGIVLRSVRVEQVIDVSVSGE AMPQKSTWFYPKVMTGMVFHSLETEA
Specific function: Unknown
COG id: COG4198
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47111; Mature: 46980
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEIAPFKGIVYGPDLSGDAANLICPPYDAIPPAMQQELYARSDYNAVRLELPSEADPYA CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHH AASSRLREWLVSGVLAQDGEPALYPCFQTFEDEHGVTRTRKGVFVALRLYDFSEGEVLPH HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCC ERTLSGPKADRLKMFRETGANISSIFGLYADSSRRADEAISEFAERNAPLIDATLQGVRN CCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH RLWRVADPALISVAQSVLAEQKVYIADGHHRYETGIAYRNERAASNPGHTGREPYNYIMT HHHHHCCHHHHHHHHHHHHHCCEEEECCCEEHHCCCCCCCCCCCCCCCCCCCCHHHHHHH YLSNIYDDGLLILPIHRLVHGIESFDPESFIAQLDRWFTVWELPGRSALDEFLETGDSAK HHHHHHCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHEEEEECCCHHHHHHHHHCCCCCE VFGIVLPGMVLGISLDPKPSEVLSTPVPEALQSLDVVVLHDLVLGQILGISSEAMARQSN EEEEECCHHHEEECCCCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCC LTYTSKTADVFEAVVSGKAQLGIVLRSVRVEQVIDVSVSGEAMPQKSTWFYPKVMTGMVF CCEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHH HSLETEA HHHCCCC >Mature Secondary Structure PEIAPFKGIVYGPDLSGDAANLICPPYDAIPPAMQQELYARSDYNAVRLELPSEADPYA CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHH AASSRLREWLVSGVLAQDGEPALYPCFQTFEDEHGVTRTRKGVFVALRLYDFSEGEVLPH HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCC ERTLSGPKADRLKMFRETGANISSIFGLYADSSRRADEAISEFAERNAPLIDATLQGVRN CCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH RLWRVADPALISVAQSVLAEQKVYIADGHHRYETGIAYRNERAASNPGHTGREPYNYIMT HHHHHCCHHHHHHHHHHHHHCCEEEECCCEEHHCCCCCCCCCCCCCCCCCCCCHHHHHHH YLSNIYDDGLLILPIHRLVHGIESFDPESFIAQLDRWFTVWELPGRSALDEFLETGDSAK HHHHHHCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHEEEEECCCHHHHHHHHHCCCCCE VFGIVLPGMVLGISLDPKPSEVLSTPVPEALQSLDVVVLHDLVLGQILGISSEAMARQSN EEEEECCHHHEEECCCCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCC LTYTSKTADVFEAVVSGKAQLGIVLRSVRVEQVIDVSVSGEAMPQKSTWFYPKVMTGMVF CCEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHH HSLETEA HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA